RNA–Protein interactions for RNA: ENST00000229387.6

RFX4-201, Transcript of regulatory factor X4, humanhuman

TSL 1 (best) BASIC

Gene RFX4, Length 3,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4-201ENST00000229387 GPR160Q9UJ42 338 aa5.47□□□□□ -1.53
RFX4-201ENST00000229387 TNFSF13BQ9Y275 285 aa5.47□□□□□ -1.53
RFX4-201ENST00000229387 PCDHB14Q9Y5E9 798 aa5.47□□□□□ -1.53
RFX4-201ENST00000229387 MCM3APO60318 1980 aa5.47□□□□□ -1.53
RFX4-201ENST00000229387 RBBP6Q7Z6E9 1792 aaKnown RBP5.47□□□□□ -1.53
RFX4-201ENST00000229387 IGKV6-21A0A0C4DH24 114 aa5.46□□□□□ -1.53
RFX4-201ENST00000229387 TCRBV5S1A1TA0A578 114 aa5.46□□□□□ -1.53
RFX4-201ENST00000229387 KDM4EB2RXH2 506 aaPredicted RBP5.46□□□□□ -1.53
RFX4-201ENST00000229387 ITGB1BP1O14713 200 aa5.46□□□□□ -1.53
RFX4-201ENST00000229387 VPS26AO75436 327 aa5.46□□□□□ -1.53
RFX4-201ENST00000229387 BEST1O76090 585 aa5.46□□□□□ -1.53
RFX4-201ENST00000229387 GLUD1P00367 558 aa5.46□□□□□ -1.53
RFX4-201ENST00000229387 C9P02748 559 aa5.46□□□□□ -1.53
RFX4-201ENST00000229387 HEXAP06865 529 aa5.46□□□□□ -1.53
RFX4-201ENST00000229387 CBSLP0DN79 551 aa5.46□□□□□ -1.53
RFX4-201ENST00000229387 THRBP10828 461 aa5.46□□□□□ -1.53
RFX4-201ENST00000229387 TPH1P17752 444 aa5.46□□□□□ -1.53
RFX4-201ENST00000229387 CBSP35520 551 aa5.46□□□□□ -1.53
RFX4-201ENST00000229387 WNT5AP41221 380 aa5.46□□□□□ -1.53
RFX4-201ENST00000229387 CLDN20P56880 219 aa5.46□□□□□ -1.53
RFX4-201ENST00000229387 PIGHQ14442 188 aaPredicted RBP5.46□□□□□ -1.53
RFX4-201ENST00000229387 SLC9B1Q4ZJI4 515 aa5.46□□□□□ -1.53
RFX4-201ENST00000229387 FAM98BQ52LJ0 330 aaKnown RBP5.46□□□□□ -1.53
RFX4-201ENST00000229387 SLC35D3Q5M8T2 416 aa5.46□□□□□ -1.53
RFX4-201ENST00000229387 RIPPLY2Q5TAB7 128 aa5.46□□□□□ -1.53
RFX4-201ENST00000229387 SLC25A24Q6NUK1 477 aa5.46□□□□□ -1.53
RFX4-201ENST00000229387 PLPPR4Q7Z2D5 763 aa5.46□□□□□ -1.53
RFX4-201ENST00000229387 MON1AQ86VX9 555 aa5.46□□□□□ -1.53
RFX4-201ENST00000229387 C7orf61Q8IZ16 206 aa5.46□□□□□ -1.53
RFX4-201ENST00000229387 PLD6Q8N2A8 252 aaKnown RBP5.46□□□□□ -1.53
RFX4-201ENST00000229387 DNAJC22Q8N4W6 341 aa5.46□□□□□ -1.53
RFX4-201ENST00000229387 PNPLA1Q8N8W4 532 aa5.46□□□□□ -1.53
RFX4-201ENST00000229387 RDH11Q8TC12 318 aa5.46□□□□□ -1.53
RFX4-201ENST00000229387 SNX33Q8WV41 574 aa5.46□□□□□ -1.53
RFX4-201ENST00000229387 LRIG1Q96JA1 1093 aa5.46□□□□□ -1.53
RFX4-201ENST00000229387 FCRL3Q96P31 734 aaPredicted RBP5.46□□□□□ -1.53
RFX4-201ENST00000229387 LGMNQ99538 433 aa5.46□□□□□ -1.53
RFX4-201ENST00000229387 SLC38A3Q99624 504 aa5.46□□□□□ -1.53
RFX4-201ENST00000229387 APOL2Q9BQE5 337 aa5.46□□□□□ -1.53
RFX4-201ENST00000229387 RTP3Q9BQQ7 232 aa5.46□□□□□ -1.53
RFX4-201ENST00000229387 KLHL31Q9H511 634 aa5.46□□□□□ -1.53
RFX4-201ENST00000229387 FOLH1BQ9HBA9 442 aa5.46□□□□□ -1.53
RFX4-201ENST00000229387 ZBTB20Q9HC78 741 aaPredicted RBP5.46□□□□□ -1.53
RFX4-201ENST00000229387 DYRK4Q9NR20 520 aa5.46□□□□□ -1.53
RFX4-201ENST00000229387 KRT84Q9NSB2 600 aa5.46□□□□□ -1.53
RFX4-201ENST00000229387 FLRT1Q9NZU1 646 aa5.46□□□□□ -1.53
RFX4-201ENST00000229387 SLC22A14Q9Y267 594 aa5.46□□□□□ -1.53
RFX4-201ENST00000229387 SNX10Q9Y5X0 201 aa5.46□□□□□ -1.53
RFX4-201ENST00000229387 V9GYH0 126 aa5.46□□□□□ -1.53
RFX4-201ENST00000229387 OTOFQ9HC10 1997 aa5.46□□□□□ -1.54
RFX4-201ENST00000229387 RGPD3A6NKT7 1758 aaPredicted RBP5.46□□□□□ -1.54
RFX4-201ENST00000229387 RGPD4Q7Z3J3 1758 aa5.46□□□□□ -1.54
RFX4-201ENST00000229387 A0A1W2PPC1 479 aa5.46□□□□□ -1.54
RFX4-201ENST00000229387 BCLAF3A2AJT9 711 aaKnown RBP5.46□□□□□ -1.54
RFX4-201ENST00000229387 OR2A25A4D2G3 310 aa5.46□□□□□ -1.54
RFX4-201ENST00000229387 C3orf70A6NLC5 250 aaPredicted RBP5.46□□□□□ -1.54
RFX4-201ENST00000229387 CXCL11O14625 94 aa5.46□□□□□ -1.54
RFX4-201ENST00000229387 PLOD3O60568 738 aa5.46□□□□□ -1.54
RFX4-201ENST00000229387 DXOO77932 396 aaKnown RBP5.46□□□□□ -1.54
RFX4-201ENST00000229387 PRSS23O95084 383 aa5.46□□□□□ -1.54
RFX4-201ENST00000229387 MOCS2O96007 188 aaPredicted RBP5.46□□□□□ -1.54
RFX4-201ENST00000229387 GALTP07902 379 aa5.46□□□□□ -1.54
RFX4-201ENST00000229387 SLC2A1P11166 492 aa5.46□□□□□ -1.54
RFX4-201ENST00000229387 IL7RP16871 459 aa5.46□□□□□ -1.54
RFX4-201ENST00000229387 IGFBP5P24593 272 aa5.46□□□□□ -1.54
RFX4-201ENST00000229387 HOXA11P31270 313 aaPredicted RBP5.46□□□□□ -1.54
RFX4-201ENST00000229387 CA5AP35218 305 aa5.46□□□□□ -1.54
RFX4-201ENST00000229387 RPS19P39019 145 aaKnown RBP5.46□□□□□ -1.54
RFX4-201ENST00000229387 RAD52P43351 418 aa5.46□□□□□ -1.54
RFX4-201ENST00000229387 NRIP1P48552 1158 aa5.46□□□□□ -1.54
RFX4-201ENST00000229387 ADPRHP54922 357 aa5.46□□□□□ -1.54
RFX4-201ENST00000229387 ISL1P61371 349 aa5.46□□□□□ -1.54
RFX4-201ENST00000229387 SEMG2Q02383 582 aa5.46□□□□□ -1.54
RFX4-201ENST00000229387 LMAN2Q12907 356 aa5.46□□□□□ -1.54
RFX4-201ENST00000229387 HNF4GQ14541 408 aa5.46□□□□□ -1.54
RFX4-201ENST00000229387 SOWAHAQ2M3V2 549 aa5.46□□□□□ -1.54
RFX4-201ENST00000229387 LGALSLQ3ZCW2 172 aaPredicted RBP5.46□□□□□ -1.54
RFX4-201ENST00000229387 HECTD3Q5T447 861 aa5.46□□□□□ -1.54
RFX4-201ENST00000229387 ATPAF1Q5TC12 328 aaPredicted RBP5.46□□□□□ -1.54
RFX4-201ENST00000229387 RNF219Q5W0B1 726 aaPredicted RBP5.46□□□□□ -1.54
RFX4-201ENST00000229387 ANKS6Q68DC2 871 aa5.46□□□□□ -1.54
RFX4-201ENST00000229387 KIAA1211LQ6NV74 962 aa5.46□□□□□ -1.54
RFX4-201ENST00000229387 DEGS2Q6QHC5 323 aa5.46□□□□□ -1.54
RFX4-201ENST00000229387 SYNPOQ8N3V7 929 aa5.46□□□□□ -1.54
RFX4-201ENST00000229387 FBXO15Q8NCQ5 510 aaPredicted RBP5.46□□□□□ -1.54
RFX4-201ENST00000229387 CCNYQ8ND76 341 aa5.46□□□□□ -1.54
RFX4-201ENST00000229387 CA5BP1Q8WTZ4 195 aa5.46□□□□□ -1.54
RFX4-201ENST00000229387 TMBIM1Q969X1 311 aa5.46□□□□□ -1.54
RFX4-201ENST00000229387 KIAA1143Q96AT1 154 aaPredicted RBP5.46□□□□□ -1.54
RFX4-201ENST00000229387 MOCOSQ96EN8 888 aa5.46□□□□□ -1.54
RFX4-201ENST00000229387 Q96MT0 163 aa5.46□□□□□ -1.54
RFX4-201ENST00000229387 CMSS1Q9BQ75 279 aaKnown RBP5.46□□□□□ -1.54
RFX4-201ENST00000229387 PAAF1Q9BRP4 392 aa5.46□□□□□ -1.54
RFX4-201ENST00000229387 TMEM175Q9BSA9 504 aa5.46□□□□□ -1.54
RFX4-201ENST00000229387 CCNB1IP1Q9NPC3 277 aa5.46□□□□□ -1.54
RFX4-201ENST00000229387 C11orf16Q9NQ32 467 aa5.46□□□□□ -1.54
RFX4-201ENST00000229387 PRMT7Q9NVM4 692 aaPredicted RBP5.46□□□□□ -1.54
RFX4-201ENST00000229387 SEC14L3Q9UDX4 400 aa5.46□□□□□ -1.54
RFX4-201ENST00000229387 DCDC2Q9UHG0 476 aa5.46□□□□□ -1.54
RFX4-201ENST00000229387 OGDHLQ9ULD0 1010 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms