RNA–Protein interactions for RNA: ENST00000227507.2

CCND1-201, Transcript of cyclin D1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCND1, Length 4,307 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-201ENST00000227507 ATG9BQ674R7 924 aa11.03□□□□□ -0.64
CCND1-201ENST00000227507 UBE2R2Q712K3 238 aaPredicted RBP11.03□□□□□ -0.64
CCND1-201ENST00000227507 KRT74Q7RTS7 529 aa11.03□□□□□ -0.64
CCND1-201ENST00000227507 CLECL1Q8IZS7 167 aa11.03□□□□□ -0.64
CCND1-201ENST00000227507 VN1R2Q8NFZ6 395 aa11.03□□□□□ -0.64
CCND1-201ENST00000227507 ASB15Q8WXK1 588 aa11.03□□□□□ -0.64
CCND1-201ENST00000227507 UBE2E3Q969T4 207 aa11.03□□□□□ -0.64
CCND1-201ENST00000227507 MTERF1Q99551 399 aaKnown RBP11.03□□□□□ -0.64
CCND1-201ENST00000227507 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.03□□□□□ -0.64
CCND1-201ENST00000227507 A0A1W2PQL4 384 aaPredicted RBP11.03□□□□□ -0.64
CCND1-201ENST00000227507 ISM1B1AKI9 464 aa11.03□□□□□ -0.64
CCND1-201ENST00000227507 PLD2O14939 933 aa11.03□□□□□ -0.64
CCND1-201ENST00000227507 ADH1BP00325 375 aa11.03□□□□□ -0.64
CCND1-201ENST00000227507 F11P03951 625 aa11.03□□□□□ -0.64
CCND1-201ENST00000227507 NUDT7P0C024 238 aa11.03□□□□□ -0.64
CCND1-201ENST00000227507 JUNDP17535 347 aa11.03□□□□□ -0.64
CCND1-201ENST00000227507 SKP1P63208 163 aa11.03□□□□□ -0.64
CCND1-201ENST00000227507 BNC1Q01954 994 aa11.03□□□□□ -0.64
CCND1-201ENST00000227507 TAGLNQ01995 201 aaKnown RBP11.03□□□□□ -0.64
CCND1-201ENST00000227507 MRPL58Q14197 206 aaKnown RBP11.03□□□□□ -0.64
CCND1-201ENST00000227507 VMACQ2NL98 169 aa11.03□□□□□ -0.64
CCND1-201ENST00000227507 TMEM220Q6QAJ8 160 aa11.03□□□□□ -0.64
CCND1-201ENST00000227507 IDO2Q6ZQW0 420 aa11.03□□□□□ -0.64
CCND1-201ENST00000227507 ZBTB2Q8N680 514 aa11.03□□□□□ -0.64
CCND1-201ENST00000227507 BCL7CQ8WUZ0 217 aaPredicted RBP11.03□□□□□ -0.64
CCND1-201ENST00000227507 WACQ9BTA9 647 aa11.03□□□□□ -0.64
CCND1-201ENST00000227507 HDHD5Q9BXW7 423 aa11.03□□□□□ -0.64
CCND1-201ENST00000227507 C11orf54Q9H0W9 315 aaPredicted RBP11.03□□□□□ -0.64
CCND1-201ENST00000227507 PPIL3Q9H2H8 161 aaKnown RBP11.03□□□□□ -0.64
CCND1-201ENST00000227507 WDR26Q9H7D7 661 aa11.03□□□□□ -0.64
CCND1-201ENST00000227507 ATP13A2Q9NQ11 1180 aa11.03□□□□□ -0.64
CCND1-201ENST00000227507 NUDT4Q9NZJ9 180 aa11.03□□□□□ -0.64
CCND1-201ENST00000227507 PCDHGB1Q9Y5G3 927 aa11.03□□□□□ -0.64
CCND1-201ENST00000227507 ARHGAP33O14559 1287 aa11.02□□□□□ -0.64
CCND1-201ENST00000227507 LILRB3O75022 631 aa11.02□□□□□ -0.64
CCND1-201ENST00000227507 LEFTY1O75610 366 aa11.02□□□□□ -0.64
CCND1-201ENST00000227507 STK16O75716 305 aa11.02□□□□□ -0.64
CCND1-201ENST00000227507 CLDN7O95471 211 aa11.02□□□□□ -0.64
CCND1-201ENST00000227507 SLC2A2P11168 524 aaPredicted RBP11.02□□□□□ -0.64
CCND1-201ENST00000227507 TNNI3P19429 210 aa11.02□□□□□ -0.64
CCND1-201ENST00000227507 RPS19P39019 145 aaKnown RBP11.02□□□□□ -0.64
CCND1-201ENST00000227507 BLKP51451 505 aa11.02□□□□□ -0.64
CCND1-201ENST00000227507 CAV3P56539 151 aa11.02□□□□□ -0.64
CCND1-201ENST00000227507 TATDN3Q17R31 274 aa11.02□□□□□ -0.64
CCND1-201ENST00000227507 ZSWIM7Q19AV6 140 aa11.02□□□□□ -0.64
CCND1-201ENST00000227507 LCN1P1Q5VSP4 162 aa11.02□□□□□ -0.64
CCND1-201ENST00000227507 KDM4DQ6B0I6 523 aa11.02□□□□□ -0.64
CCND1-201ENST00000227507 CAPN13Q6MZZ7 669 aaPredicted RBP11.02□□□□□ -0.64
CCND1-201ENST00000227507 MZT2BQ6NZ67 158 aa11.02□□□□□ -0.64
CCND1-201ENST00000227507 CASP12Q6UXS9 341 aa11.02□□□□□ -0.64
CCND1-201ENST00000227507 USP30Q70CQ3 517 aa11.02□□□□□ -0.64
CCND1-201ENST00000227507 GAREM2Q75VX8 874 aa11.02□□□□□ -0.64
CCND1-201ENST00000227507 NLRP8Q86W28 1048 aa11.02□□□□□ -0.64
CCND1-201ENST00000227507 CFAP206Q8IYR0 622 aa11.02□□□□□ -0.64
CCND1-201ENST00000227507 APCDD1Q8J025 514 aa11.02□□□□□ -0.64
CCND1-201ENST00000227507 SLC37A3Q8NCC5 494 aa11.02□□□□□ -0.64
CCND1-201ENST00000227507 OR6C4Q8NGE1 309 aa11.02□□□□□ -0.64
CCND1-201ENST00000227507 SORCS1Q8WY21 1168 aa11.02□□□□□ -0.64
CCND1-201ENST00000227507 CCDC32Q9BV29 185 aa11.02□□□□□ -0.64
CCND1-201ENST00000227507 RNF121Q9H920 327 aa11.02□□□□□ -0.64
CCND1-201ENST00000227507 B4GALT6Q9UBX8 382 aa11.02□□□□□ -0.64
CCND1-201ENST00000227507 AP3M1Q9Y2T2 418 aa11.02□□□□□ -0.64
CCND1-201ENST00000227507 TNFRSF10BO14763 440 aa11.02□□□□□ -0.65
CCND1-201ENST00000227507 CASKO14936 926 aa11.02□□□□□ -0.65
CCND1-201ENST00000227507 NUPL2O15504 423 aaKnown RBP11.02□□□□□ -0.65
CCND1-201ENST00000227507 C1QCP02747 245 aa11.02□□□□□ -0.65
CCND1-201ENST00000227507 GNSP15586 552 aa11.02□□□□□ -0.65
CCND1-201ENST00000227507 ERP29P30040 261 aaKnown RBP11.02□□□□□ -0.65
CCND1-201ENST00000227507 PKLRP30613 574 aa11.02□□□□□ -0.65
CCND1-201ENST00000227507 ZFP36L2P47974 494 aaKnown RBP11.02□□□□□ -0.65
CCND1-201ENST00000227507 CSNK2BP67870 215 aa11.02□□□□□ -0.65
CCND1-201ENST00000227507 ABATP80404 500 aa11.02□□□□□ -0.65
CCND1-201ENST00000227507 HOXC5Q00444 222 aa11.02□□□□□ -0.65
CCND1-201ENST00000227507 NCF4Q15080 339 aa11.02□□□□□ -0.65
CCND1-201ENST00000227507 SLC14A2Q15849 920 aa11.02□□□□□ -0.65
CCND1-201ENST00000227507 IQCCQ4KMZ1 466 aa11.02□□□□□ -0.65
CCND1-201ENST00000227507 ZC3H12BQ5HYM0 836 aaKnown RBP11.02□□□□□ -0.65
CCND1-201ENST00000227507 C22orf42Q6IC83 251 aa11.02□□□□□ -0.65
CCND1-201ENST00000227507 RSPO2Q6UXX9 243 aaPredicted RBP11.02□□□□□ -0.65
CCND1-201ENST00000227507 ZNF852Q6ZMS4 543 aa11.02□□□□□ -0.65
CCND1-201ENST00000227507 DNAJC22Q8N4W6 341 aa11.02□□□□□ -0.65
CCND1-201ENST00000227507 RIOK2Q9BVS4 552 aaKnown RBP11.02□□□□□ -0.65
CCND1-201ENST00000227507 TMEM245Q9H330 911 aa11.02□□□□□ -0.65
CCND1-201ENST00000227507 MCUBQ9NWR8 336 aa11.02□□□□□ -0.65
CCND1-201ENST00000227507 NDRG4Q9ULP0 352 aaKnown RBP11.02□□□□□ -0.65
CCND1-201ENST00000227507 CLEC4AQ9UMR7 237 aa11.02□□□□□ -0.65
CCND1-201ENST00000227507 MRPS7Q9Y2R9 242 aaKnown RBP11.02□□□□□ -0.65
CCND1-201ENST00000227507 MROH6A6NGR9 719 aa11.02□□□□□ -0.65
CCND1-201ENST00000227507 ANKDD1BA6NHY2 528 aa11.02□□□□□ -0.65
CCND1-201ENST00000227507 NPC1O15118 1278 aa11.02□□□□□ -0.65
CCND1-201ENST00000227507 MUSKO15146 869 aa11.02□□□□□ -0.65
CCND1-201ENST00000227507 TP53P04637 393 aaPredicted RBP11.02□□□□□ -0.65
CCND1-201ENST00000227507 ALAS2P22557 587 aa11.02□□□□□ -0.65
CCND1-201ENST00000227507 NTSR1P30989 418 aa11.02□□□□□ -0.65
CCND1-201ENST00000227507 GKP32189 559 aa11.02□□□□□ -0.65
CCND1-201ENST00000227507 DDOSTP39656 456 aa11.02□□□□□ -0.65
CCND1-201ENST00000227507 PBX2P40425 430 aa11.02□□□□□ -0.65
CCND1-201ENST00000227507 ACSM2AQ08AH3 577 aa11.02□□□□□ -0.65
CCND1-201ENST00000227507 PTCHD3Q3KNS1 767 aa11.02□□□□□ -0.65
CCND1-201ENST00000227507 ZNF805Q5CZA5 627 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms