RNA–Protein interactions for RNA: ENST00000224237.9

VIM-201, Transcript of vimentin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIM, Length 1,868 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-201ENST00000224237 DPH2Q9BQC3 489 aaPredicted RBP17.17■□□□□ 0.34
VIM-201ENST00000224237 FAM60AQ9NP50 221 aa17.17■□□□□ 0.34
VIM-201ENST00000224237 LRIT1Q9P2V4 623 aa17.17■□□□□ 0.34
VIM-201ENST00000224237 FAF1Q9UNN5 650 aaPredicted RBP17.17■□□□□ 0.34
VIM-201ENST00000224237 ENTPD4Q9Y227 616 aa17.17■□□□□ 0.34
VIM-201ENST00000224237 RNF215Q9Y6U7 377 aa17.17■□□□□ 0.34
VIM-201ENST00000224237 SLC9B1P1A6NJY1 282 aa17.16■□□□□ 0.34
VIM-201ENST00000224237 TPST1O60507 370 aa17.16■□□□□ 0.34
VIM-201ENST00000224237 PRKRAO75569 313 aaKnown RBP17.16■□□□□ 0.34
VIM-201ENST00000224237 SERPINA1P01009 418 aa17.16■□□□□ 0.34
VIM-201ENST00000224237 NR2F6P10588 404 aa17.16■□□□□ 0.34
VIM-201ENST00000224237 BMP2P12643 396 aa17.16■□□□□ 0.34
VIM-201ENST00000224237 IL1RNP18510 177 aa17.16■□□□□ 0.34
VIM-201ENST00000224237 VSX2P58304 361 aaPredicted RBP17.16■□□□□ 0.34
VIM-201ENST00000224237 SNRPNP63162 240 aaKnown RBP17.16■□□□□ 0.34
VIM-201ENST00000224237 CHRNB3Q05901 458 aa17.16■□□□□ 0.34
VIM-201ENST00000224237 SHBQ15464 509 aa17.16■□□□□ 0.34
VIM-201ENST00000224237 C18orf63Q68DL7 685 aa17.16■□□□□ 0.34
VIM-201ENST00000224237 EID3Q8N140 333 aa17.16■□□□□ 0.34
VIM-201ENST00000224237 DTWD2Q8NBA8 298 aa17.16■□□□□ 0.34
VIM-201ENST00000224237 FBXO30Q8TB52 745 aa17.16■□□□□ 0.34
VIM-201ENST00000224237 EME1Q96AY2 570 aa17.16■□□□□ 0.34
VIM-201ENST00000224237 VCXQ9H320 206 aa17.16■□□□□ 0.34
VIM-201ENST00000224237 YY1AP1Q9H869 796 aa17.16■□□□□ 0.34
VIM-201ENST00000224237 MS4A12Q9NXJ0 267 aa17.16■□□□□ 0.34
VIM-201ENST00000224237 EPHA6Q9UF33 1036 aa17.16■□□□□ 0.34
VIM-201ENST00000224237 RAPGEFL1Q9UHV5 662 aa17.16■□□□□ 0.34
VIM-201ENST00000224237 CES1P1Q9UKY3 287 aa17.16■□□□□ 0.34
VIM-201ENST00000224237 SAMD4AQ9UPU9 718 aaKnown RBP17.16■□□□□ 0.34
VIM-201ENST00000224237 TLCD2A6NGC4 264 aa17.16■□□□□ 0.34
VIM-201ENST00000224237 GLOD5A6NK44 160 aa17.16■□□□□ 0.34
VIM-201ENST00000224237 TXNDC9O14530 226 aa17.16■□□□□ 0.34
VIM-201ENST00000224237 PGRMC2O15173 223 aa17.16■□□□□ 0.34
VIM-201ENST00000224237 GLB1P16278 677 aa17.16■□□□□ 0.34
VIM-201ENST00000224237 TNFRSF17Q02223 184 aa17.16■□□□□ 0.34
VIM-201ENST00000224237 FAM92BQ6ZTR7 304 aa17.16■□□□□ 0.34
VIM-201ENST00000224237 AMIGO2Q86SJ2 522 aa17.16■□□□□ 0.34
VIM-201ENST00000224237 RNF130Q86XS8 419 aa17.16■□□□□ 0.34
VIM-201ENST00000224237 C11orf65Q8NCR3 313 aa17.16■□□□□ 0.34
VIM-201ENST00000224237 PIGKQ92643 395 aa17.16■□□□□ 0.34
VIM-201ENST00000224237 NEURL3Q96EH8 262 aa17.16■□□□□ 0.34
VIM-201ENST00000224237 ZDHHC12Q96GR4 267 aa17.16■□□□□ 0.34
VIM-201ENST00000224237 AMDHD1Q96NU7 426 aa17.16■□□□□ 0.34
VIM-201ENST00000224237 BBS4Q96RK4 519 aa17.16■□□□□ 0.34
VIM-201ENST00000224237 CD180Q99467 661 aa17.16■□□□□ 0.34
VIM-201ENST00000224237 CHID1Q9BWS9 393 aa17.16■□□□□ 0.34
VIM-201ENST00000224237 EPB41L1Q9H4G0 881 aa17.16■□□□□ 0.34
VIM-201ENST00000224237 GLIPR2Q9H4G4 154 aa17.16■□□□□ 0.34
VIM-201ENST00000224237 EPS8L2Q9H6S3 715 aa17.16■□□□□ 0.34
VIM-201ENST00000224237 SIRT3Q9NTG7 399 aaPredicted RBP17.16■□□□□ 0.34
VIM-201ENST00000224237 GIMAP4Q9NUV9 329 aa17.16■□□□□ 0.34
VIM-201ENST00000224237 ZSCAN32Q9NX65 697 aa17.16■□□□□ 0.34
VIM-201ENST00000224237 PSME2Q9UL46 239 aa17.16■□□□□ 0.34
VIM-201ENST00000224237 DAPP1Q9UN19 280 aa17.16■□□□□ 0.34
VIM-201ENST00000224237 LRCH1Q9Y2L9 728 aa17.16■□□□□ 0.34
VIM-201ENST00000224237 SLC22A7Q9Y694 548 aa17.16■□□□□ 0.34
VIM-201ENST00000224237 FRYLO94915 3013 aa17.15■□□□□ 0.34
VIM-201ENST00000224237 SRPX2O60687 465 aaPredicted RBP17.15■□□□□ 0.34
VIM-201ENST00000224237 TNFRSF21O75509 655 aa17.15■□□□□ 0.34
VIM-201ENST00000224237 ERAL1O75616 437 aaKnown RBP17.15■□□□□ 0.34
VIM-201ENST00000224237 NUDT7P0C024 238 aa17.15■□□□□ 0.34
VIM-201ENST00000224237 GIMD1P0DJR0 217 aa17.15■□□□□ 0.34
VIM-201ENST00000224237 ETFAP13804 333 aa17.15■□□□□ 0.34
VIM-201ENST00000224237 ALDH4A1P30038 563 aa17.15■□□□□ 0.34
VIM-201ENST00000224237 PCGF2P35227 344 aa17.15■□□□□ 0.34
VIM-201ENST00000224237 NCBP2P52298 156 aaKnown RBP eCLIP17.15■□□□□ 0.34
VIM-201ENST00000224237 RBBP4Q09028 425 aa17.15■□□□□ 0.34
VIM-201ENST00000224237 SFT2D3Q587I9 215 aa17.15■□□□□ 0.34
VIM-201ENST00000224237 COX20Q5RI15 118 aa17.15■□□□□ 0.34
VIM-201ENST00000224237 SAXO2Q658L1 398 aa17.15■□□□□ 0.34
VIM-201ENST00000224237 SLC35F3Q8IY50 421 aa17.15■□□□□ 0.34
VIM-201ENST00000224237 ANKFN1Q8N957 763 aa17.15■□□□□ 0.34
VIM-201ENST00000224237 KLHL6Q8WZ60 621 aa17.15■□□□□ 0.34
VIM-201ENST00000224237 SLC47A1Q96FL8 570 aa17.15■□□□□ 0.34
VIM-201ENST00000224237 CENPNQ96H22 339 aaPredicted RBP17.15■□□□□ 0.34
VIM-201ENST00000224237 AHCYL2Q96HN2 611 aaKnown RBP17.15■□□□□ 0.34
VIM-201ENST00000224237 TMEM38AQ9H6F2 299 aa17.15■□□□□ 0.34
VIM-201ENST00000224237 MAGIXQ9H6Y5 334 aa17.15■□□□□ 0.34
VIM-201ENST00000224237 PRDM9Q9NQV7 894 aa17.15■□□□□ 0.34
VIM-201ENST00000224237 DNAAF2Q9NVR5 837 aaKnown RBP17.15■□□□□ 0.34
VIM-201ENST00000224237 FBXO4Q9UKT5 387 aa17.15■□□□□ 0.34
VIM-201ENST00000224237 CNOT11Q9UKZ1 510 aaKnown RBP17.15■□□□□ 0.34
VIM-201ENST00000224237 MAP4K5Q9Y4K4 846 aa17.15■□□□□ 0.34
VIM-201ENST00000224237 MYO1GB0I1T2 1018 aa17.14■□□□□ 0.33
VIM-201ENST00000224237 MYF5P13349 255 aa17.14■□□□□ 0.33
VIM-201ENST00000224237 CPN2P22792 545 aa17.14■□□□□ 0.33
VIM-201ENST00000224237 EPHA8P29322 1005 aaPredicted RBP17.14■□□□□ 0.33
VIM-201ENST00000224237 AQP4P55087 323 aa17.14■□□□□ 0.33
VIM-201ENST00000224237 LIM2P55344 173 aa17.14■□□□□ 0.33
VIM-201ENST00000224237 SPIDRQ14159 915 aa17.14■□□□□ 0.33
VIM-201ENST00000224237 CEBPEQ15744 281 aa17.14■□□□□ 0.33
VIM-201ENST00000224237 DEFB110Q30KQ9 67 aa17.14■□□□□ 0.33
VIM-201ENST00000224237 SPDYE7PQ495Y7 208 aa17.14■□□□□ 0.33
VIM-201ENST00000224237 LRRC23Q53EV4 343 aaPredicted RBP17.14■□□□□ 0.33
VIM-201ENST00000224237 GCNT6Q5T4J0 391 aa17.14■□□□□ 0.33
VIM-201ENST00000224237 PEAR1Q5VY43 1037 aaPredicted RBP17.14■□□□□ 0.33
VIM-201ENST00000224237 ENPP6Q6UWR7 440 aa17.14■□□□□ 0.33
VIM-201ENST00000224237 MCATQ8IVS2 390 aaKnown RBP17.14■□□□□ 0.33
VIM-201ENST00000224237 DNAJC22Q8N4W6 341 aa17.14■□□□□ 0.33
VIM-201ENST00000224237 ICA1LQ8NDH6 482 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms