RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 NCF4Q15080 339 aa12.67□□□□□ -0.38
SRP54-201ENST00000216774 SAXO2Q658L1 398 aa12.67□□□□□ -0.38
SRP54-201ENST00000216774 TMIGD1Q6UXZ0 262 aa12.67□□□□□ -0.38
SRP54-201ENST00000216774 IL17RDQ8NFM7 739 aa12.67□□□□□ -0.38
SRP54-201ENST00000216774 CYB5D2Q8WUJ1 264 aa12.67□□□□□ -0.38
SRP54-201ENST00000216774 SLC38A5Q8WUX1 472 aa12.67□□□□□ -0.38
SRP54-201ENST00000216774 TMCO6Q96DC7 493 aa12.67□□□□□ -0.38
SRP54-201ENST00000216774 DTD2Q96FN9 168 aa12.67□□□□□ -0.38
SRP54-201ENST00000216774 DHRS1Q96LJ7 313 aa12.67□□□□□ -0.38
SRP54-201ENST00000216774 CFHR5Q9BXR6 569 aa12.67□□□□□ -0.38
SRP54-201ENST00000216774 SMURF1Q9HCE7 757 aa12.67□□□□□ -0.38
SRP54-201ENST00000216774 HHATLQ9HCP6 504 aa12.67□□□□□ -0.38
SRP54-201ENST00000216774 FBXL12Q9NXK8 326 aa12.67□□□□□ -0.38
SRP54-201ENST00000216774 SEC14L4Q9UDX3 406 aa12.67□□□□□ -0.38
SRP54-201ENST00000216774 SNX8Q9Y5X2 465 aa12.67□□□□□ -0.38
SRP54-201ENST00000216774 DOCK6Q96HP0 2047 aa12.67□□□□□ -0.38
SRP54-201ENST00000216774 CTDSP2O14595 271 aa12.67□□□□□ -0.38
SRP54-201ENST00000216774 TBX19O60806 448 aa12.67□□□□□ -0.38
SRP54-201ENST00000216774 PDE9AO76083 593 aa12.67□□□□□ -0.38
SRP54-201ENST00000216774 SLITRK5O94991 958 aa12.67□□□□□ -0.38
SRP54-201ENST00000216774 DDCP20711 480 aa12.67□□□□□ -0.38
SRP54-201ENST00000216774 VASPP50552 380 aaPredicted RBP12.67□□□□□ -0.38
SRP54-201ENST00000216774 GRIN2CQ14957 1233 aa12.67□□□□□ -0.38
SRP54-201ENST00000216774 CARTPTQ16568 116 aa12.67□□□□□ -0.38
SRP54-201ENST00000216774 AGAP6Q5VW22 663 aa12.67□□□□□ -0.38
SRP54-201ENST00000216774 C12orf73Q69YU5 71 aa12.67□□□□□ -0.38
SRP54-201ENST00000216774 TMCO2Q7Z6W1 182 aaPredicted RBP12.67□□□□□ -0.38
SRP54-201ENST00000216774 SLC9B2Q86UD5 537 aa12.67□□□□□ -0.38
SRP54-201ENST00000216774 TRAPPC5Q8IUR0 188 aa12.67□□□□□ -0.38
SRP54-201ENST00000216774 KRT78Q8N1N4 520 aa12.67□□□□□ -0.38
SRP54-201ENST00000216774 SORCS1Q8WY21 1168 aa12.67□□□□□ -0.38
SRP54-201ENST00000216774 OR5P2Q8WZ92 322 aa12.67□□□□□ -0.38
SRP54-201ENST00000216774 TMEM80Q96HE8 168 aa12.67□□□□□ -0.38
SRP54-201ENST00000216774 COQ10AQ96MF6 247 aa12.67□□□□□ -0.38
SRP54-201ENST00000216774 AGAP4Q96P64 663 aa12.67□□□□□ -0.38
SRP54-201ENST00000216774 KCNS3Q9BQ31 491 aa12.67□□□□□ -0.38
SRP54-201ENST00000216774 MND1Q9BWT6 205 aa12.67□□□□□ -0.38
SRP54-201ENST00000216774 ASPNQ9BXN1 380 aa12.67□□□□□ -0.38
SRP54-201ENST00000216774 MIR1-1HGQ9H1L0 117 aa12.67□□□□□ -0.38
SRP54-201ENST00000216774 TBC1D14Q9P2M4 693 aa12.67□□□□□ -0.38
SRP54-201ENST00000216774 RPL36Q9Y3U8 105 aaKnown RBP12.67□□□□□ -0.38
SRP54-201ENST00000216774 C17orf113A0A1B0GUU1 675 aa12.66□□□□□ -0.38
SRP54-201ENST00000216774 MFN2O95140 757 aa12.66□□□□□ -0.38
SRP54-201ENST00000216774 SOD1P00441 154 aa12.66□□□□□ -0.38
SRP54-201ENST00000216774 DDX5P17844 614 aaKnown RBP12.66□□□□□ -0.38
SRP54-201ENST00000216774 MAGP20916 626 aa12.66□□□□□ -0.38
SRP54-201ENST00000216774 TNFSF8P32971 234 aa12.66□□□□□ -0.38
SRP54-201ENST00000216774 DGKGP49619 791 aa12.66□□□□□ -0.38
SRP54-201ENST00000216774 SPHARQ15513 63 aa12.66□□□□□ -0.38
SRP54-201ENST00000216774 NDUFA5Q16718 116 aa12.66□□□□□ -0.38
SRP54-201ENST00000216774 LY6G5CQ5SRR4 150 aa12.66□□□□□ -0.38
SRP54-201ENST00000216774 TMC5Q6UXY8 1006 aa12.66□□□□□ -0.38
SRP54-201ENST00000216774 VN1R5Q7Z5H4 357 aa12.66□□□□□ -0.38
SRP54-201ENST00000216774 HORMAD2Q8N7B1 307 aa12.66□□□□□ -0.38
SRP54-201ENST00000216774 KREMEN2Q8NCW0 462 aa12.66□□□□□ -0.38
SRP54-201ENST00000216774 ZNF740Q8NDX6 193 aa12.66□□□□□ -0.38
SRP54-201ENST00000216774 ZNF514Q96K75 400 aaPredicted RBP12.66□□□□□ -0.38
SRP54-201ENST00000216774 LINC00615Q96LM1 132 aaPredicted RBP12.66□□□□□ -0.38
SRP54-201ENST00000216774 TEFMQ96QE5 360 aaKnown RBP12.66□□□□□ -0.38
SRP54-201ENST00000216774 IL4I1Q96RQ9 567 aa12.66□□□□□ -0.38
SRP54-201ENST00000216774 DPEP2Q9H4A9 486 aa12.66□□□□□ -0.38
SRP54-201ENST00000216774 NEUROD4Q9HD90 331 aa12.66□□□□□ -0.38
SRP54-201ENST00000216774 C11orf16Q9NQ32 467 aa12.66□□□□□ -0.38
SRP54-201ENST00000216774 TDP1Q9NUW8 608 aa12.66□□□□□ -0.38
SRP54-201ENST00000216774 MYOFQ9NZM1 2061 aa12.66□□□□□ -0.38
SRP54-201ENST00000216774 MMP20O60882 483 aa12.65□□□□□ -0.38
SRP54-201ENST00000216774 SEMA3DO95025 777 aa12.65□□□□□ -0.38
SRP54-201ENST00000216774 BCHEP06276 602 aa12.65□□□□□ -0.38
SRP54-201ENST00000216774 PTPN2P17706 415 aa12.65□□□□□ -0.38
SRP54-201ENST00000216774 PSMA1P25786 263 aaKnown RBP12.65□□□□□ -0.38
SRP54-201ENST00000216774 ELAVL4P26378 380 aaKnown RBP12.65□□□□□ -0.38
SRP54-201ENST00000216774 SMIM11AP58511 58 aa12.65□□□□□ -0.38
SRP54-201ENST00000216774 TP53BP2Q13625 1128 aa12.65□□□□□ -0.38
SRP54-201ENST00000216774 DOC2BQ14184 412 aa12.65□□□□□ -0.38
SRP54-201ENST00000216774 LEXMQ3ZCV2 418 aa12.65□□□□□ -0.38
SRP54-201ENST00000216774 RPS26P11Q5JNZ5 115 aaPredicted RBP12.65□□□□□ -0.38
SRP54-201ENST00000216774 PRAMEF14Q5SWL7 426 aa12.65□□□□□ -0.38
SRP54-201ENST00000216774 DCST1Q5T197 706 aa12.65□□□□□ -0.38
SRP54-201ENST00000216774 PRAMEF13Q5VWM6 474 aa12.65□□□□□ -0.38
SRP54-201ENST00000216774 TCTN3Q6NUS6 607 aa12.65□□□□□ -0.38
SRP54-201ENST00000216774 LCTLQ6UWM7 567 aa12.65□□□□□ -0.38
SRP54-201ENST00000216774 CASP12Q6UXS9 341 aa12.65□□□□□ -0.38
SRP54-201ENST00000216774 PARS2Q7L3T8 475 aaKnown RBP12.65□□□□□ -0.38
SRP54-201ENST00000216774 REM2Q8IYK8 340 aaPredicted RBP12.65□□□□□ -0.38
SRP54-201ENST00000216774 MMP21Q8N119 569 aa12.65□□□□□ -0.38
SRP54-201ENST00000216774 CLIP4Q8N3C7 705 aa12.65□□□□□ -0.38
SRP54-201ENST00000216774 GPR32P1Q8NGA4 272 aa12.65□□□□□ -0.38
SRP54-201ENST00000216774 OR8J1Q8NGP2 316 aa12.65□□□□□ -0.38
SRP54-201ENST00000216774 RASSF5Q8WWW0 418 aa12.65□□□□□ -0.38
SRP54-201ENST00000216774 VWCEQ96DN2 955 aa12.65□□□□□ -0.38
SRP54-201ENST00000216774 CNPPD1Q9BV87 410 aa12.65□□□□□ -0.38
SRP54-201ENST00000216774 OR2AG1Q9H205 316 aa12.65□□□□□ -0.38
SRP54-201ENST00000216774 LINC00597Q9H2U6 94 aa12.65□□□□□ -0.38
SRP54-201ENST00000216774 NDUFB11Q9NX14 153 aa12.65□□□□□ -0.38
SRP54-201ENST00000216774 MARK1Q9P0L2 795 aa12.65□□□□□ -0.38
SRP54-201ENST00000216774 STUB1Q9UNE7 303 aa12.65□□□□□ -0.38
SRP54-201ENST00000216774 ABHD14A-ACY1A0A1B0GW23 586 aa12.65□□□□□ -0.38
SRP54-201ENST00000216774 ZNF670-ZNF695F2Z2N8 137 aa12.65□□□□□ -0.38
SRP54-201ENST00000216774 FAM227AF5H4B4 570 aa12.65□□□□□ -0.38
SRP54-201ENST00000216774 CCL16O15467 120 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms