RNA–Protein interactions for RNA: ENST00000064724.7

CLDN11-201, Transcript of claudin 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDN11, Length 2,169 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-201ENST00000064724 CRISP1P54107 249 aa16.48■□□□□ 0.23
CLDN11-201ENST00000064724 MANFP55145 182 aaKnown RBP16.48■□□□□ 0.23
CLDN11-201ENST00000064724 LIM2P55344 173 aa16.48■□□□□ 0.23
CLDN11-201ENST00000064724 REEP5Q00765 189 aa16.48■□□□□ 0.23
CLDN11-201ENST00000064724 ZNF404Q494X3 552 aa16.48■□□□□ 0.23
CLDN11-201ENST00000064724 PERM1Q5SV97 790 aa16.48■□□□□ 0.23
CLDN11-201ENST00000064724 FAM180BQ6P0A1 224 aa16.48■□□□□ 0.23
CLDN11-201ENST00000064724 USP43Q70EL4 1123 aa16.48■□□□□ 0.23
CLDN11-201ENST00000064724 MMAAQ8IVH4 418 aaKnown RBP16.48■□□□□ 0.23
CLDN11-201ENST00000064724 SFTPA1Q8IWL2 248 aa16.48■□□□□ 0.23
CLDN11-201ENST00000064724 QRFPRQ96P65 431 aa16.48■□□□□ 0.23
CLDN11-201ENST00000064724 ARMC7Q9H6L4 198 aa16.48■□□□□ 0.23
CLDN11-201ENST00000064724 NMNAT1Q9HAN9 279 aaPredicted RBP16.48■□□□□ 0.23
CLDN11-201ENST00000064724 LHX9Q9NQ69 397 aa16.48■□□□□ 0.23
CLDN11-201ENST00000064724 CFAP20Q9Y6A4 193 aaKnown RBP16.48■□□□□ 0.23
CLDN11-201ENST00000064724 DNMT3AQ9Y6K1 912 aaPredicted RBP16.48■□□□□ 0.23
CLDN11-201ENST00000064724 MUC22E2RYF6 1773 aaPredicted RBP16.47■□□□□ 0.23
CLDN11-201ENST00000064724 KRBA1A5PL33 1030 aa16.47■□□□□ 0.23
CLDN11-201ENST00000064724 EFCAB10A6NFE3 127 aa16.47■□□□□ 0.23
CLDN11-201ENST00000064724 METTL15A6NJ78 407 aa16.47■□□□□ 0.23
CLDN11-201ENST00000064724 CACNB4O00305 520 aaPredicted RBP16.47■□□□□ 0.23
CLDN11-201ENST00000064724 PDPK1O15530 556 aa16.47■□□□□ 0.23
CLDN11-201ENST00000064724 TLL1O43897 1013 aa16.47■□□□□ 0.23
CLDN11-201ENST00000064724 PTHP01270 115 aa16.47■□□□□ 0.23
CLDN11-201ENST00000064724 RPLP0P05388 317 aaKnown RBP16.47■□□□□ 0.23
CLDN11-201ENST00000064724 CHMP24386 653 aa16.47■□□□□ 0.23
CLDN11-201ENST00000064724 CD40LGP29965 261 aa16.47■□□□□ 0.23
CLDN11-201ENST00000064724 GSTM5P46439 218 aa16.47■□□□□ 0.23
CLDN11-201ENST00000064724 OLR1P78380 273 aa16.47■□□□□ 0.23
CLDN11-201ENST00000064724 HTRA3P83110 453 aa16.47■□□□□ 0.23
CLDN11-201ENST00000064724 DSG4Q86SJ6 1040 aa16.47■□□□□ 0.23
CLDN11-201ENST00000064724 LRRTM4Q86VH4 590 aa16.47■□□□□ 0.23
CLDN11-201ENST00000064724 HEATR4Q86WZ0 1026 aa16.47■□□□□ 0.23
CLDN11-201ENST00000064724 B3GNT7Q8NFL0 401 aa16.47■□□□□ 0.23
CLDN11-201ENST00000064724 GPR32P1Q8NGA4 272 aa16.47■□□□□ 0.23
CLDN11-201ENST00000064724 C9orf43Q8TAL5 461 aaPredicted RBP16.47■□□□□ 0.23
CLDN11-201ENST00000064724 SMPDL3AQ92484 453 aa16.47■□□□□ 0.23
CLDN11-201ENST00000064724 RSPO3Q9BXY4 272 aaPredicted RBP16.47■□□□□ 0.23
CLDN11-201ENST00000064724 NXF2Q9GZY0 626 aaKnown RBP16.47■□□□□ 0.23
CLDN11-201ENST00000064724 ABCG4Q9H172 646 aa16.47■□□□□ 0.23
CLDN11-201ENST00000064724 SIRT3Q9NTG7 399 aaPredicted RBP16.47■□□□□ 0.23
CLDN11-201ENST00000064724 CUEDC1Q9NWM3 386 aaPredicted RBP16.47■□□□□ 0.23
CLDN11-201ENST00000064724 DPP7Q9UHL4 492 aa16.47■□□□□ 0.23
CLDN11-201ENST00000064724 SLC6A14Q9UN76 642 aa16.47■□□□□ 0.23
CLDN11-201ENST00000064724 PCDHGA3Q9Y5H0 932 aa16.47■□□□□ 0.23
CLDN11-201ENST00000064724 TCF20Q9UGU0 1960 aaKnown RBP16.47■□□□□ 0.23
CLDN11-201ENST00000064724 C5orf58C9J3I9 102 aa16.47■□□□□ 0.23
CLDN11-201ENST00000064724 C1QTNF3-AMACRE9PGA6 284 aa16.47■□□□□ 0.23
CLDN11-201ENST00000064724 B4GALT2O60909 372 aa16.47■□□□□ 0.23
CLDN11-201ENST00000064724 SERPINB7O75635 380 aa16.47■□□□□ 0.23
CLDN11-201ENST00000064724 ADAP00813 363 aa16.47■□□□□ 0.23
CLDN11-201ENST00000064724 ALOX5P09917 674 aa16.47■□□□□ 0.23
CLDN11-201ENST00000064724 RGS6P49758 472 aa16.47■□□□□ 0.23
CLDN11-201ENST00000064724 RPS26P62854 115 aaKnown RBP16.47■□□□□ 0.23
CLDN11-201ENST00000064724 CYP4F2P78329 520 aa16.47■□□□□ 0.23
CLDN11-201ENST00000064724 CDK3Q00526 305 aa16.47■□□□□ 0.23
CLDN11-201ENST00000064724 MAPK11Q15759 364 aa16.47■□□□□ 0.23
CLDN11-201ENST00000064724 TOR1AIP1Q5JTV8 583 aa16.47■□□□□ 0.23
CLDN11-201ENST00000064724 TNFAIP8L2Q6P589 184 aaPredicted RBP16.47■□□□□ 0.23
CLDN11-201ENST00000064724 TUBA3EQ6PEY2 450 aa16.47■□□□□ 0.23
CLDN11-201ENST00000064724 TMEM19Q96HH6 336 aa16.47■□□□□ 0.23
CLDN11-201ENST00000064724 DHRS1Q96LJ7 313 aa16.47■□□□□ 0.23
CLDN11-201ENST00000064724 NRTNQ99748 197 aa16.47■□□□□ 0.23
CLDN11-201ENST00000064724 RHCGQ9UBD6 479 aa16.47■□□□□ 0.23
CLDN11-201ENST00000064724 ADAM29Q9UKF5 820 aa16.47■□□□□ 0.23
CLDN11-201ENST00000064724 KLK4Q9Y5K2 254 aa16.47■□□□□ 0.23
CLDN11-201ENST00000064724 A0A1W2PPV9 198 aa16.46■□□□□ 0.23
CLDN11-201ENST00000064724 BCHEP06276 602 aa16.46■□□□□ 0.23
CLDN11-201ENST00000064724 CNTN1Q12860 1018 aa16.46■□□□□ 0.23
CLDN11-201ENST00000064724 ARMCX4Q5H9R4 360 aa16.46■□□□□ 0.23
CLDN11-201ENST00000064724 RPS26P11Q5JNZ5 115 aaPredicted RBP16.46■□□□□ 0.23
CLDN11-201ENST00000064724 FAM78AQ5JUQ0 283 aa16.46■□□□□ 0.23
CLDN11-201ENST00000064724 C19orf48Q6RUI8 117 aa16.46■□□□□ 0.23
CLDN11-201ENST00000064724 FAM92BQ6ZTR7 304 aa16.46■□□□□ 0.23
CLDN11-201ENST00000064724 C6orf120Q7Z4R8 191 aa16.46■□□□□ 0.23
CLDN11-201ENST00000064724 SNX29P2Q8IUI4 249 aa16.46■□□□□ 0.23
CLDN11-201ENST00000064724 RBM12BQ8IXT5 1001 aaKnown RBP16.46■□□□□ 0.23
CLDN11-201ENST00000064724 TAGAPQ8N103 731 aa16.46■□□□□ 0.23
CLDN11-201ENST00000064724 TRNAU1APQ9NX07 287 aaKnown RBP16.46■□□□□ 0.23
CLDN11-201ENST00000064724 TAS2R7Q9NYW3 318 aa16.46■□□□□ 0.23
CLDN11-201ENST00000064724 KIAA1549LQ6ZVL6 1849 aa16.46■□□□□ 0.23
CLDN11-201ENST00000064724 C5orf67F2Z3F1 127 aa16.45■□□□□ 0.22
CLDN11-201ENST00000064724 M0R129 80 aa16.45■□□□□ 0.22
CLDN11-201ENST00000064724 TAF4O00268 1085 aa16.45■□□□□ 0.22
CLDN11-201ENST00000064724 SEMA7AO75326 666 aa16.45■□□□□ 0.22
CLDN11-201ENST00000064724 PDE9AO76083 593 aa16.45■□□□□ 0.22
CLDN11-201ENST00000064724 IMPDH2P12268 514 aa16.45■□□□□ 0.22
CLDN11-201ENST00000064724 GRK5P34947 590 aa16.45■□□□□ 0.22
CLDN11-201ENST00000064724 SLC15A1P46059 708 aa16.45■□□□□ 0.22
CLDN11-201ENST00000064724 PIP5KL1Q5T9C9 394 aa16.45■□□□□ 0.22
CLDN11-201ENST00000064724 TCTN3Q6NUS6 607 aa16.45■□□□□ 0.22
CLDN11-201ENST00000064724 PLEKHG7Q6ZR37 379 aa16.45■□□□□ 0.22
CLDN11-201ENST00000064724 ZNF367Q7RTV3 350 aa16.45■□□□□ 0.22
CLDN11-201ENST00000064724 SPRED2Q7Z698 418 aa16.45■□□□□ 0.22
CLDN11-201ENST00000064724 SLC44A2Q8IWA5 706 aaPredicted RBP16.45■□□□□ 0.22
CLDN11-201ENST00000064724 AMER2Q8N7J2 671 aa16.45■□□□□ 0.22
CLDN11-201ENST00000064724 SMG7Q92540 1137 aaKnown RBP16.45■□□□□ 0.22
CLDN11-201ENST00000064724 ZBED6CLQ96FA7 236 aaPredicted RBP16.45■□□□□ 0.22
CLDN11-201ENST00000064724 LGR4Q9BXB1 951 aa16.45■□□□□ 0.22
CLDN11-201ENST00000064724 PRSS16Q9NQE7 514 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms