RNA–Protein interactions for RNA: ENST00000055335.10

PPP1R3F-201, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PPP1R3F, Length 3,421 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-201ENST00000055335 MSL3P1P0C860 447 aa19.16■□□□□ 0.66
PPP1R3F-201ENST00000055335 PREPP48147 710 aa19.16■□□□□ 0.66
PPP1R3F-201ENST00000055335 SEC23BQ15437 767 aa19.16■□□□□ 0.66
PPP1R3F-201ENST00000055335 SNAPC1Q16533 368 aa19.16■□□□□ 0.66
PPP1R3F-201ENST00000055335 OLIG3Q7RTU3 272 aa19.16■□□□□ 0.66
PPP1R3F-201ENST00000055335 GHDCQ8N2G8 530 aa19.16■□□□□ 0.66
PPP1R3F-201ENST00000055335 C2orf73Q8N5S3 287 aaPredicted RBP19.16■□□□□ 0.66
PPP1R3F-201ENST00000055335 LILRA3Q8N6C8 439 aaPredicted RBP19.16■□□□□ 0.66
PPP1R3F-201ENST00000055335 SCAMP4Q969E2 229 aa19.16■□□□□ 0.66
PPP1R3F-201ENST00000055335 QRFPRQ96P65 431 aa19.16■□□□□ 0.66
PPP1R3F-201ENST00000055335 FTSJ1Q9UET6 329 aa19.16■□□□□ 0.66
PPP1R3F-201ENST00000055335 ENPP4Q9Y6X5 453 aa19.16■□□□□ 0.66
PPP1R3F-201ENST00000055335 A8MUA0 341 aa19.16■□□□□ 0.66
PPP1R3F-201ENST00000055335 FZD6O60353 706 aa19.16■□□□□ 0.66
PPP1R3F-201ENST00000055335 MPZL2O60487 215 aa19.16■□□□□ 0.66
PPP1R3F-201ENST00000055335 BCHEP06276 602 aa19.16■□□□□ 0.66
PPP1R3F-201ENST00000055335 MYL12AP19105 171 aa19.16■□□□□ 0.66
PPP1R3F-201ENST00000055335 PPIBP23284 216 aaKnown RBP19.16■□□□□ 0.66
PPP1R3F-201ENST00000055335 ETV5P41161 510 aa19.16■□□□□ 0.66
PPP1R3F-201ENST00000055335 ETV1P50549 477 aa19.16■□□□□ 0.66
PPP1R3F-201ENST00000055335 ATN1P54259 1190 aaPredicted RBP19.16■□□□□ 0.66
PPP1R3F-201ENST00000055335 CTBP2P56545 445 aa19.16■□□□□ 0.66
PPP1R3F-201ENST00000055335 RTP2Q5QGT7 225 aa19.16■□□□□ 0.66
PPP1R3F-201ENST00000055335 MZT2BQ6NZ67 158 aa19.16■□□□□ 0.66
PPP1R3F-201ENST00000055335 LHFPL3Q86UP9 236 aa19.16■□□□□ 0.66
PPP1R3F-201ENST00000055335 ASB11Q8WXH4 323 aa19.16■□□□□ 0.66
PPP1R3F-201ENST00000055335 PPCDCQ96CD2 204 aa19.16■□□□□ 0.66
PPP1R3F-201ENST00000055335 RPL36Q9Y3U8 105 aaKnown RBP19.16■□□□□ 0.66
PPP1R3F-201ENST00000055335 PATJQ8NI35 1801 aa19.15■□□□□ 0.66
PPP1R3F-201ENST00000055335 TRAV6A0A075B6T7 132 aa19.15■□□□□ 0.66
PPP1R3F-201ENST00000055335 ADAM12O43184 909 aa19.15■□□□□ 0.66
PPP1R3F-201ENST00000055335 ALDH9A1P49189 494 aa19.15■□□□□ 0.66
PPP1R3F-201ENST00000055335 LSM11P83369 360 aaKnown RBP eCLIP19.15■□□□□ 0.66
PPP1R3F-201ENST00000055335 RHAGQ02094 409 aa19.15■□□□□ 0.66
PPP1R3F-201ENST00000055335 PLD1Q13393 1074 aa19.15■□□□□ 0.66
PPP1R3F-201ENST00000055335 ZNF267Q14586 743 aaPredicted RBP19.15■□□□□ 0.66
PPP1R3F-201ENST00000055335 DCST1Q5T197 706 aa19.15■□□□□ 0.66
PPP1R3F-201ENST00000055335 TRIM40Q6P9F5 258 aa19.15■□□□□ 0.66
PPP1R3F-201ENST00000055335 MSANTD1Q6ZTZ1 278 aa19.15■□□□□ 0.66
PPP1R3F-201ENST00000055335 USP45Q70EL2 814 aa19.15■□□□□ 0.66
PPP1R3F-201ENST00000055335 DNAJC5GQ8N7S2 189 aa19.15■□□□□ 0.66
PPP1R3F-201ENST00000055335 GDPD1Q8N9F7 314 aa19.15■□□□□ 0.66
PPP1R3F-201ENST00000055335 LRRC20Q8TCA0 184 aa19.15■□□□□ 0.66
PPP1R3F-201ENST00000055335 UPRTQ96BW1 309 aa19.15■□□□□ 0.66
PPP1R3F-201ENST00000055335 LRR1Q96L50 414 aa19.15■□□□□ 0.66
PPP1R3F-201ENST00000055335 OTOFQ9HC10 1997 aa19.15■□□□□ 0.66
PPP1R3F-201ENST00000055335 LYRM1O43325 122 aa19.15■□□□□ 0.66
PPP1R3F-201ENST00000055335 CELF2O95319 508 aaKnown RBP19.15■□□□□ 0.66
PPP1R3F-201ENST00000055335 GSTM1P09488 218 aa19.15■□□□□ 0.66
PPP1R3F-201ENST00000055335 XCR1P46094 333 aa19.15■□□□□ 0.66
PPP1R3F-201ENST00000055335 BDKRB1P46663 353 aa19.15■□□□□ 0.66
PPP1R3F-201ENST00000055335 LIM2P55344 173 aa19.15■□□□□ 0.66
PPP1R3F-201ENST00000055335 POU6F2P78424 691 aaPredicted RBP19.15■□□□□ 0.66
PPP1R3F-201ENST00000055335 MPPE1Q53F39 396 aa19.15■□□□□ 0.66
PPP1R3F-201ENST00000055335 FAM205BPQ63HN1 556 aa19.15■□□□□ 0.66
PPP1R3F-201ENST00000055335 SPERTQ8NA61 448 aa19.15■□□□□ 0.66
PPP1R3F-201ENST00000055335 ART5Q96L15 291 aa19.15■□□□□ 0.66
PPP1R3F-201ENST00000055335 ZDHHC3Q9NYG2 299 aa19.15■□□□□ 0.66
PPP1R3F-201ENST00000055335 CIB4A0PJX0 185 aa19.15■□□□□ 0.66
PPP1R3F-201ENST00000055335 TEX28O15482 410 aa19.15■□□□□ 0.66
PPP1R3F-201ENST00000055335 IGHA2P01877 340 aa19.15■□□□□ 0.66
PPP1R3F-201ENST00000055335 DDX5P17844 614 aaKnown RBP19.15■□□□□ 0.66
PPP1R3F-201ENST00000055335 SLC9A3P48764 834 aa19.15■□□□□ 0.66
PPP1R3F-201ENST00000055335 SMAD3P84022 425 aaKnown RBP19.15■□□□□ 0.66
PPP1R3F-201ENST00000055335 RBBP4Q09028 425 aa19.15■□□□□ 0.66
PPP1R3F-201ENST00000055335 C19orf48Q6RUI8 117 aa19.15■□□□□ 0.66
PPP1R3F-201ENST00000055335 ARPC5LQ9BPX5 153 aa19.15■□□□□ 0.66
PPP1R3F-201ENST00000055335 C2orf92A0A1B0GVN3 265 aa19.14■□□□□ 0.65
PPP1R3F-201ENST00000055335 TMEM202A6NGA9 273 aa19.14■□□□□ 0.65
PPP1R3F-201ENST00000055335 ALPPP05187 535 aa19.14■□□□□ 0.65
PPP1R3F-201ENST00000055335 BNC1Q01954 994 aa19.14■□□□□ 0.65
PPP1R3F-201ENST00000055335 MAB21L1Q13394 359 aa19.14■□□□□ 0.65
PPP1R3F-201ENST00000055335 KATNB1Q9BVA0 655 aa19.14■□□□□ 0.65
PPP1R3F-201ENST00000055335 SORBS1Q9BX66 1292 aaKnown RBP19.14■□□□□ 0.65
PPP1R3F-201ENST00000055335 CLEC4AQ9UMR7 237 aa19.14■□□□□ 0.65
PPP1R3F-201ENST00000055335 INMT-MINDY4F8WBC2 141 aa19.14■□□□□ 0.65
PPP1R3F-201ENST00000055335 CPN2P22792 545 aa19.14■□□□□ 0.65
PPP1R3F-201ENST00000055335 TAS2R50P59544 299 aa19.14■□□□□ 0.65
PPP1R3F-201ENST00000055335 RAE1P78406 368 aaKnown RBP19.14■□□□□ 0.65
PPP1R3F-201ENST00000055335 CSTF1Q05048 431 aaKnown RBP19.14■□□□□ 0.65
PPP1R3F-201ENST00000055335 PIN1Q13526 163 aaPredicted RBP19.14■□□□□ 0.65
PPP1R3F-201ENST00000055335 KRT74Q7RTS7 529 aa19.14■□□□□ 0.65
PPP1R3F-201ENST00000055335 TAS1R1Q7RTX1 841 aa19.14■□□□□ 0.65
PPP1R3F-201ENST00000055335 OR7G3Q8NG95 312 aa19.14■□□□□ 0.65
PPP1R3F-201ENST00000055335 REPS1Q96D71 796 aa19.14■□□□□ 0.65
PPP1R3F-201ENST00000055335 CHST8Q9H2A9 424 aa19.14■□□□□ 0.65
PPP1R3F-201ENST00000055335 C5AR2Q9P296 337 aa19.14■□□□□ 0.65
PPP1R3F-201ENST00000055335 FABP7O15540 132 aa19.13■□□□□ 0.65
PPP1R3F-201ENST00000055335 IFNA14P01570 189 aa19.13■□□□□ 0.65
PPP1R3F-201ENST00000055335 TRAPPC2P0DI81 140 aa19.13■□□□□ 0.65
PPP1R3F-201ENST00000055335 TRAPPC2BP0DI82 140 aa19.13■□□□□ 0.65
PPP1R3F-201ENST00000055335 ARSBP15848 533 aa19.13■□□□□ 0.65
PPP1R3F-201ENST00000055335 PTNP21246 168 aa19.13■□□□□ 0.65
PPP1R3F-201ENST00000055335 SLC6A12P48065 614 aa19.13■□□□□ 0.65
PPP1R3F-201ENST00000055335 STK19P49842 368 aaPredicted RBP19.13■□□□□ 0.65
PPP1R3F-201ENST00000055335 SRP54P61011 504 aaKnown RBP19.13■□□□□ 0.65
PPP1R3F-201ENST00000055335 POM121L1PQ3SYA9 428 aa19.13■□□□□ 0.65
PPP1R3F-201ENST00000055335 CRTC1Q6UUV9 634 aa19.13■□□□□ 0.65
PPP1R3F-201ENST00000055335 MSANTD3Q96H12 275 aa19.13■□□□□ 0.65
PPP1R3F-201ENST00000055335 CDCP1Q9H5V8 836 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms