RNA–Protein interactions for RNA: ENST00000023939.8

RTFDC1-201, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-201ENST00000023939 CTSVO60911 334 aa13.56□□□□□ -0.24
RTFDC1-201ENST00000023939 NDUFS2O75306 463 aa13.56□□□□□ -0.24
RTFDC1-201ENST00000023939 E2F6O75461 281 aa13.56□□□□□ -0.24
RTFDC1-201ENST00000023939 AIFM1O95831 613 aa13.56□□□□□ -0.24
RTFDC1-201ENST00000023939 CELA2BP08218 269 aaPredicted RBP13.56□□□□□ -0.24
RTFDC1-201ENST00000023939 GNAO1P09471 354 aa13.56□□□□□ -0.24
RTFDC1-201ENST00000023939 NTSP30990 170 aa13.56□□□□□ -0.24
RTFDC1-201ENST00000023939 DNAJA1P31689 397 aaKnown RBP13.56□□□□□ -0.24
RTFDC1-201ENST00000023939 CDK9P50750 372 aaKnown RBP13.56□□□□□ -0.24
RTFDC1-201ENST00000023939 SIM2Q14190 667 aaPredicted RBP13.56□□□□□ -0.24
RTFDC1-201ENST00000023939 KCTD21Q4G0X4 260 aa13.56□□□□□ -0.24
RTFDC1-201ENST00000023939 MANEAQ5SRI9 462 aa13.56□□□□□ -0.24
RTFDC1-201ENST00000023939 SLC48A1Q6P1K1 146 aa13.56□□□□□ -0.24
RTFDC1-201ENST00000023939 C6orf120Q7Z4R8 191 aa13.56□□□□□ -0.24
RTFDC1-201ENST00000023939 TMEM179BQ7Z7N9 219 aa13.56□□□□□ -0.24
RTFDC1-201ENST00000023939 GALNT10Q86SR1 603 aa13.56□□□□□ -0.24
RTFDC1-201ENST00000023939 CAMKK1Q8N5S9 505 aa13.56□□□□□ -0.24
RTFDC1-201ENST00000023939 METTL25Q8N6Q8 603 aa13.56□□□□□ -0.24
RTFDC1-201ENST00000023939 OR10Q1Q8NGQ4 319 aa13.56□□□□□ -0.24
RTFDC1-201ENST00000023939 NFKBIDQ8NI38 313 aa13.56□□□□□ -0.24
RTFDC1-201ENST00000023939 BAHD1Q8TBE0 780 aaPredicted RBP13.56□□□□□ -0.24
RTFDC1-201ENST00000023939 SFXN5Q8TD22 340 aa13.56□□□□□ -0.24
RTFDC1-201ENST00000023939 UTP15Q8TED0 518 aaKnown RBP13.56□□□□□ -0.24
RTFDC1-201ENST00000023939 CYGBQ8WWM9 190 aa13.56□□□□□ -0.24
RTFDC1-201ENST00000023939 CLDN23Q96B33 292 aa13.56□□□□□ -0.24
RTFDC1-201ENST00000023939 TAMM41Q96BW9 452 aa13.56□□□□□ -0.24
RTFDC1-201ENST00000023939 LRRC61Q9BV99 259 aa13.56□□□□□ -0.24
RTFDC1-201ENST00000023939 YTHDF1Q9BYJ9 559 aaKnown RBP13.56□□□□□ -0.24
RTFDC1-201ENST00000023939 EPB41L1Q9H4G0 881 aa13.56□□□□□ -0.24
RTFDC1-201ENST00000023939 GLIPR2Q9H4G4 154 aa13.56□□□□□ -0.24
RTFDC1-201ENST00000023939 VNN3Q9NY84 501 aa13.56□□□□□ -0.24
RTFDC1-201ENST00000023939 C5AR2Q9P296 337 aa13.56□□□□□ -0.24
RTFDC1-201ENST00000023939 MAGED1Q9Y5V3 778 aaPredicted RBP13.56□□□□□ -0.24
RTFDC1-201ENST00000023939 SNX8Q9Y5X2 465 aa13.56□□□□□ -0.24
RTFDC1-201ENST00000023939 SLCO1B1Q9Y6L6 691 aa13.56□□□□□ -0.24
RTFDC1-201ENST00000023939 A0A0J9YY10 115 aa13.55□□□□□ -0.24
RTFDC1-201ENST00000023939 URADA6NGE7 173 aa13.55□□□□□ -0.24
RTFDC1-201ENST00000023939 B4GALT2O60909 372 aa13.55□□□□□ -0.24
RTFDC1-201ENST00000023939 STATHP02808 62 aa13.55□□□□□ -0.24
RTFDC1-201ENST00000023939 CSF2P04141 144 aa13.55□□□□□ -0.24
RTFDC1-201ENST00000023939 NME1P15531 152 aaKnown RBP13.55□□□□□ -0.24
RTFDC1-201ENST00000023939 JUNDP17535 347 aa13.55□□□□□ -0.24
RTFDC1-201ENST00000023939 FPR1P21462 350 aa13.55□□□□□ -0.24
RTFDC1-201ENST00000023939 CERS1P27544 350 aa13.55□□□□□ -0.24
RTFDC1-201ENST00000023939 RPL5P46777 297 aaKnown RBP13.55□□□□□ -0.24
RTFDC1-201ENST00000023939 CCT3P49368 545 aaKnown RBP13.55□□□□□ -0.24
RTFDC1-201ENST00000023939 RAB8AP61006 207 aa13.55□□□□□ -0.24
RTFDC1-201ENST00000023939 HSPB3Q12988 150 aa13.55□□□□□ -0.24
RTFDC1-201ENST00000023939 SUZ12Q15022 739 aaKnown RBP13.55□□□□□ -0.24
RTFDC1-201ENST00000023939 ZNF542PQ5EBM4 170 aa13.55□□□□□ -0.24
RTFDC1-201ENST00000023939 TTC23Q5W5X9 447 aa13.55□□□□□ -0.24
RTFDC1-201ENST00000023939 REEP3Q6NUK4 255 aa13.55□□□□□ -0.24
RTFDC1-201ENST00000023939 CEACAM20Q6UY09 585 aa13.55□□□□□ -0.24
RTFDC1-201ENST00000023939 RNF44Q7L0R7 432 aa13.55□□□□□ -0.24
RTFDC1-201ENST00000023939 ZC3H7AQ8IWR0 971 aaKnown RBP13.55□□□□□ -0.24
RTFDC1-201ENST00000023939 CAMKVQ8NCB2 501 aa13.55□□□□□ -0.24
RTFDC1-201ENST00000023939 OR10G6Q8NH81 332 aa13.55□□□□□ -0.24
RTFDC1-201ENST00000023939 LZICQ8WZA0 190 aa13.55□□□□□ -0.24
RTFDC1-201ENST00000023939 UCN3Q969E3 161 aa13.55□□□□□ -0.24
RTFDC1-201ENST00000023939 MOAP1Q96BY2 351 aa13.55□□□□□ -0.24
RTFDC1-201ENST00000023939 RMND5BQ96G75 393 aaPredicted RBP13.55□□□□□ -0.24
RTFDC1-201ENST00000023939 TRAPPC9Q96Q05 1148 aa13.55□□□□□ -0.24
RTFDC1-201ENST00000023939 SERINC2Q96SA4 455 aa13.55□□□□□ -0.24
RTFDC1-201ENST00000023939 ZFYVE21Q9BQ24 234 aa13.55□□□□□ -0.24
RTFDC1-201ENST00000023939 FOXQ1Q9C009 403 aa13.55□□□□□ -0.24
RTFDC1-201ENST00000023939 UCK1Q9HA47 277 aa13.55□□□□□ -0.24
RTFDC1-201ENST00000023939 CLK4Q9HAZ1 481 aaKnown RBP13.55□□□□□ -0.24
RTFDC1-201ENST00000023939 THSD1Q9NS62 852 aa13.55□□□□□ -0.24
RTFDC1-201ENST00000023939 NDUFA13Q9P0J0 144 aa13.55□□□□□ -0.24
RTFDC1-201ENST00000023939 FBXL21Q9UKT6 434 aa13.55□□□□□ -0.24
RTFDC1-201ENST00000023939 SNRNP200O75643 2136 aaKnown RBP13.54□□□□□ -0.24
RTFDC1-201ENST00000023939 OR5K3A6NET4 321 aa13.54□□□□□ -0.24
RTFDC1-201ENST00000023939 M0QX08 132 aa13.54□□□□□ -0.24
RTFDC1-201ENST00000023939 CLPTM1O96005 669 aa13.54□□□□□ -0.24
RTFDC1-201ENST00000023939 WNT1P04628 370 aa13.54□□□□□ -0.24
RTFDC1-201ENST00000023939 TFAP2AP05549 437 aa13.54□□□□□ -0.24
RTFDC1-201ENST00000023939 PABPC4LP0CB38 370 aaKnown RBP13.54□□□□□ -0.24
RTFDC1-201ENST00000023939 CD38P28907 300 aa13.54□□□□□ -0.24
RTFDC1-201ENST00000023939 AQP1P29972 269 aa13.54□□□□□ -0.24
RTFDC1-201ENST00000023939 ARHGDIAP52565 204 aa13.54□□□□□ -0.24
RTFDC1-201ENST00000023939 RACK1P63244 317 aaKnown RBP13.54□□□□□ -0.24
RTFDC1-201ENST00000023939 BTN3A2P78410 334 aa13.54□□□□□ -0.24
RTFDC1-201ENST00000023939 SPDYE7PQ495Y7 208 aa13.54□□□□□ -0.24
RTFDC1-201ENST00000023939 LIN52Q52LA3 116 aa13.54□□□□□ -0.24
RTFDC1-201ENST00000023939 IFI44LQ53G44 452 aa13.54□□□□□ -0.24
RTFDC1-201ENST00000023939 FAM180BQ6P0A1 224 aa13.54□□□□□ -0.24
RTFDC1-201ENST00000023939 ARMC8Q8IUR7 673 aa13.54□□□□□ -0.24
RTFDC1-201ENST00000023939 HORMAD2Q8N7B1 307 aa13.54□□□□□ -0.24
RTFDC1-201ENST00000023939 ARL10Q8N8L6 244 aa13.54□□□□□ -0.24
RTFDC1-201ENST00000023939 KCT2Q8NC54 265 aa13.54□□□□□ -0.24
RTFDC1-201ENST00000023939 ZDHHC1Q8WTX9 485 aa13.54□□□□□ -0.24
RTFDC1-201ENST00000023939 FBXL20Q96IG2 436 aa13.54□□□□□ -0.24
RTFDC1-201ENST00000023939 TPD52L3Q96J77 140 aa13.54□□□□□ -0.24
RTFDC1-201ENST00000023939 EPYCQ99645 322 aa13.54□□□□□ -0.24
RTFDC1-201ENST00000023939 TMEM121BQ9BXQ6 578 aaPredicted RBP13.54□□□□□ -0.24
RTFDC1-201ENST00000023939 SMURF2Q9HAU4 748 aa13.54□□□□□ -0.24
RTFDC1-201ENST00000023939 SEMA3GQ9NS98 782 aa13.54□□□□□ -0.24
RTFDC1-201ENST00000023939 EVA1BQ9NVM1 165 aa13.54□□□□□ -0.24
RTFDC1-201ENST00000023939 DNAAF2Q9NVR5 837 aaKnown RBP13.54□□□□□ -0.24
RTFDC1-201ENST00000023939 HRASLS2Q9NWW9 162 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms