RNA–Protein interactions for RNA: ENSMUST00000076265.12

Upf3b-201, Transcript of UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3b, Length 2,344 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3b-201ENSMUST00000076265 Prss16Q9QXE5 509 aa8.65□□□□□ -1.02
Upf3b-201ENSMUST00000076265 VapbQ9QY76 243 aaKnown RBP8.65□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Polr2aP08775 1970 aaKnown RBP8.65□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Pcdh15Q99PJ1 1943 aa8.65□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Phrf1A6H619 1682 aa8.65□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Gm29276A0A087WNW5 222 aa8.65□□□□□ -1.03
Upf3b-201ENSMUST00000076265 Gm20792A0A087WRF5 222 aa8.65□□□□□ -1.03
Upf3b-201ENSMUST00000076265 Gm28490A0A087WRT9 222 aa8.65□□□□□ -1.03
Upf3b-201ENSMUST00000076265 Gm21996A0A087WSS9 222 aa8.65□□□□□ -1.03
Upf3b-201ENSMUST00000076265 Gm8159E9Q0R1 267 aa8.65□□□□□ -1.03
Upf3b-201ENSMUST00000076265 Gm3460E9QAI8 215 aa8.65□□□□□ -1.03
Upf3b-201ENSMUST00000076265 Gm10197F6QEY5 67 aa8.65□□□□□ -1.03
Upf3b-201ENSMUST00000076265 Vmn2r6H3BK29 913 aa8.65□□□□□ -1.03
Upf3b-201ENSMUST00000076265 Vmn2r29L7N2D4 852 aa8.65□□□□□ -1.03
Upf3b-201ENSMUST00000076265 ChadO55226 358 aa8.65□□□□□ -1.03
Upf3b-201ENSMUST00000076265 Egr1P08046 533 aa8.65□□□□□ -1.03
Upf3b-201ENSMUST00000076265 Wipf3P0C7L0 485 aa8.65□□□□□ -1.03
Upf3b-201ENSMUST00000076265 Cdh2P15116 906 aa8.65□□□□□ -1.03
Upf3b-201ENSMUST00000076265 Rab18P35293 206 aa8.65□□□□□ -1.03
Upf3b-201ENSMUST00000076265 DbtP53395 482 aa8.65□□□□□ -1.03
Upf3b-201ENSMUST00000076265 Sesn2P58043 480 aa8.65□□□□□ -1.03
Upf3b-201ENSMUST00000076265 Anxa11P97384 503 aaKnown RBP8.65□□□□□ -1.03
Upf3b-201ENSMUST00000076265 Rgs14P97492 547 aa8.65□□□□□ -1.03
Upf3b-201ENSMUST00000076265 PepdQ11136 493 aa8.65□□□□□ -1.03
Upf3b-201ENSMUST00000076265 Rhox4gQ2MDF7 205 aa8.65□□□□□ -1.03
Upf3b-201ENSMUST00000076265 Rhox4dQ2MDG0 205 aa8.65□□□□□ -1.03
Upf3b-201ENSMUST00000076265 Cyb5r4Q3TDX8 528 aa8.65□□□□□ -1.03
Upf3b-201ENSMUST00000076265 Rhox4eQ504P9 205 aa8.65□□□□□ -1.03
Upf3b-201ENSMUST00000076265 Rnf145Q5SWK7 663 aa8.65□□□□□ -1.03
Upf3b-201ENSMUST00000076265 Thoc6Q5U4D9 341 aa8.65□□□□□ -1.03
Upf3b-201ENSMUST00000076265 Grid2Q61625 1007 aa8.65□□□□□ -1.03
Upf3b-201ENSMUST00000076265 Smim12Q78RX3 92 aa8.65□□□□□ -1.03
Upf3b-201ENSMUST00000076265 Olfr698Q7TRN4 311 aa8.65□□□□□ -1.03
Upf3b-201ENSMUST00000076265 Olfr299Q7TS05 330 aa8.65□□□□□ -1.03
Upf3b-201ENSMUST00000076265 Vgll4Q80V24 287 aa8.65□□□□□ -1.03
Upf3b-201ENSMUST00000076265 Kcng4Q80XM3 506 aa8.65□□□□□ -1.03
Upf3b-201ENSMUST00000076265 Lrfn4Q80XU8 636 aa8.65□□□□□ -1.03
Upf3b-201ENSMUST00000076265 Cpt1cQ8BGD5 798 aa8.65□□□□□ -1.03
Upf3b-201ENSMUST00000076265 LipkQ8BM14 398 aa8.65□□□□□ -1.03
Upf3b-201ENSMUST00000076265 Q8BWG4 1187 aa8.65□□□□□ -1.03
Upf3b-201ENSMUST00000076265 ItpkaQ8R071 459 aa8.65□□□□□ -1.03
Upf3b-201ENSMUST00000076265 Q8R3Y5 413 aa8.65□□□□□ -1.03
Upf3b-201ENSMUST00000076265 NrmQ8VC65 262 aa8.65□□□□□ -1.03
Upf3b-201ENSMUST00000076265 Olfr692Q8VF03 329 aa8.65□□□□□ -1.03
Upf3b-201ENSMUST00000076265 Olfr810Q8VFH9 312 aa8.65□□□□□ -1.03
Upf3b-201ENSMUST00000076265 Barhl2Q8VIB5 384 aa8.65□□□□□ -1.03
Upf3b-201ENSMUST00000076265 Prpf6Q91YR7 941 aaKnown RBP8.65□□□□□ -1.03
Upf3b-201ENSMUST00000076265 GgactQ923B0 149 aa8.65□□□□□ -1.03
Upf3b-201ENSMUST00000076265 DhddsQ99KU1 333 aa8.65□□□□□ -1.03
Upf3b-201ENSMUST00000076265 Pkp2Q9CQ73 795 aaKnown RBP8.65□□□□□ -1.03
Upf3b-201ENSMUST00000076265 Gadd45gip1Q9CR59 222 aa8.65□□□□□ -1.03
Upf3b-201ENSMUST00000076265 Vkorc1Q9CRC0 161 aa8.65□□□□□ -1.03
Upf3b-201ENSMUST00000076265 Nudt17Q9CWD3 296 aa8.65□□□□□ -1.03
Upf3b-201ENSMUST00000076265 Pgm3Q9CYR6 542 aa8.65□□□□□ -1.03
Upf3b-201ENSMUST00000076265 Ndufaf4Q9D1H6 173 aa8.65□□□□□ -1.03
Upf3b-201ENSMUST00000076265 Hm13Q9D8V0 378 aa8.65□□□□□ -1.03
Upf3b-201ENSMUST00000076265 Tmem43Q9DBS1 400 aa8.65□□□□□ -1.03
Upf3b-201ENSMUST00000076265 Erap1Q9EQH2 930 aa8.65□□□□□ -1.03
Upf3b-201ENSMUST00000076265 Rhox4bQ9JI43 205 aa8.65□□□□□ -1.03
Upf3b-201ENSMUST00000076265 Rab9aQ9R0M6 201 aa8.65□□□□□ -1.03
Upf3b-201ENSMUST00000076265 Tusc2Q9WVF8 110 aa8.65□□□□□ -1.03
Upf3b-201ENSMUST00000076265 Mageb2A2AHM0 380 aa8.64□□□□□ -1.03
Upf3b-201ENSMUST00000076265 Ptpn3A2ALK8 913 aa8.64□□□□□ -1.03
Upf3b-201ENSMUST00000076265 Gm14085A2AWR5 660 aa8.64□□□□□ -1.03
Upf3b-201ENSMUST00000076265 PiggD3Z3Y1 983 aa8.64□□□□□ -1.03
Upf3b-201ENSMUST00000076265 Gm7275E9Q1B3 247 aa8.64□□□□□ -1.03
Upf3b-201ENSMUST00000076265 Vmn2r11E9Q4X4 861 aa8.64□□□□□ -1.03
Upf3b-201ENSMUST00000076265 Olfr715bE9Q725 315 aa8.64□□□□□ -1.03
Upf3b-201ENSMUST00000076265 Zfp212G3X8R7 492 aa8.64□□□□□ -1.03
Upf3b-201ENSMUST00000076265 Ascl2O35885 263 aa8.64□□□□□ -1.03
Upf3b-201ENSMUST00000076265 Lin7bO88951 207 aa8.64□□□□□ -1.03
Upf3b-201ENSMUST00000076265 Cd5P13379 494 aa8.64□□□□□ -1.03
Upf3b-201ENSMUST00000076265 Cxcl9P18340 126 aa8.64□□□□□ -1.03
Upf3b-201ENSMUST00000076265 Eif1P48024 113 aaKnown RBP8.64□□□□□ -1.03
Upf3b-201ENSMUST00000076265 CtskP55097 329 aa8.64□□□□□ -1.03
Upf3b-201ENSMUST00000076265 Foxp2P58463 714 aa8.64□□□□□ -1.03
Upf3b-201ENSMUST00000076265 Lpar1P61793 364 aa8.64□□□□□ -1.03
Upf3b-201ENSMUST00000076265 Uba1Q02053 1058 aaKnown RBP8.64□□□□□ -1.03
Upf3b-201ENSMUST00000076265 Vps54Q5SPW0 977 aa8.64□□□□□ -1.03
Upf3b-201ENSMUST00000076265 Gpank1Q61858 372 aa8.64□□□□□ -1.03
Upf3b-201ENSMUST00000076265 Fam214aQ69ZK7 1075 aa8.64□□□□□ -1.03
Upf3b-201ENSMUST00000076265 KdsrQ6GV12 332 aa8.64□□□□□ -1.03
Upf3b-201ENSMUST00000076265 Zfp82Q6P9Y7 530 aa8.64□□□□□ -1.03
Upf3b-201ENSMUST00000076265 P4ha3Q6W3F0 542 aa8.64□□□□□ -1.03
Upf3b-201ENSMUST00000076265 Msrb2Q78J03 175 aa8.64□□□□□ -1.03
Upf3b-201ENSMUST00000076265 Lrp10Q7TQH7 713 aa8.64□□□□□ -1.03
Upf3b-201ENSMUST00000076265 Pqlc1Q80XM9 271 aa8.64□□□□□ -1.03
Upf3b-201ENSMUST00000076265 Llgl1Q80Y17 1036 aa8.64□□□□□ -1.03
Upf3b-201ENSMUST00000076265 Leng9Q8BTN6 485 aa8.64□□□□□ -1.03
Upf3b-201ENSMUST00000076265 Gpr107Q8BUV8 551 aa8.64□□□□□ -1.03
Upf3b-201ENSMUST00000076265 Pdcd2lQ8C5N5 364 aa8.64□□□□□ -1.03
Upf3b-201ENSMUST00000076265 Nat10Q8K224 1024 aaKnown RBP8.64□□□□□ -1.03
Upf3b-201ENSMUST00000076265 Pank1Q8K4K6 548 aa8.64□□□□□ -1.03
Upf3b-201ENSMUST00000076265 Abhd17cQ8VCV1 320 aa8.64□□□□□ -1.03
Upf3b-201ENSMUST00000076265 Olfr715Q8VG49 315 aa8.64□□□□□ -1.03
Upf3b-201ENSMUST00000076265 Olfr790Q8VGJ3 322 aa8.64□□□□□ -1.03
Upf3b-201ENSMUST00000076265 Eif1bQ9CXU9 113 aa8.64□□□□□ -1.03
Upf3b-201ENSMUST00000076265 Tmem88Q9D0N8 159 aa8.64□□□□□ -1.03
Upf3b-201ENSMUST00000076265 Ift27Q9D0P8 186 aa8.64□□□□□ -1.03
Upf3b-201ENSMUST00000076265 Sacm1lQ9EP69 587 aa8.64□□□□□ -1.03
Retrieved 100 of 22,080 RNA–protein pairs in 23.5 ms