RNA–Protein interactions for RNA: ENST00000639568.1

PTP4A1-207, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5

Gene PTP4A1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-207ENST00000639568 ZBTB14O43829 449 aa10.04□□□□□ -0.8
PTP4A1-207ENST00000639568 ACSL3O95573 720 aa10.04□□□□□ -0.8
PTP4A1-207ENST00000639568 C1QAP02745 245 aa10.04□□□□□ -0.8
PTP4A1-207ENST00000639568 TMEM253P0C7T8 217 aa10.04□□□□□ -0.8
PTP4A1-207ENST00000639568 RBP3P10745 1247 aa10.04□□□□□ -0.8
PTP4A1-207ENST00000639568 TNNI3P19429 210 aa10.04□□□□□ -0.8
PTP4A1-207ENST00000639568 RPS3P23396 243 aaKnown RBP eCLIP10.04□□□□□ -0.8
PTP4A1-207ENST00000639568 GCKP35557 465 aa10.04□□□□□ -0.8
PTP4A1-207ENST00000639568 HNF4AP41235 474 aa10.04□□□□□ -0.8
PTP4A1-207ENST00000639568 PCYT1AP49585 367 aa10.04□□□□□ -0.8
PTP4A1-207ENST00000639568 HSD17B7P56937 341 aa10.04□□□□□ -0.8
PTP4A1-207ENST00000639568 RAB8AP61006 207 aa10.04□□□□□ -0.8
PTP4A1-207ENST00000639568 TBPL1P62380 186 aa10.04□□□□□ -0.8
PTP4A1-207ENST00000639568 ASPHQ12797 758 aa10.04□□□□□ -0.8
PTP4A1-207ENST00000639568 CDH17Q12864 832 aa10.04□□□□□ -0.8
PTP4A1-207ENST00000639568 TMEM249Q2WGJ8 235 aa10.04□□□□□ -0.8
PTP4A1-207ENST00000639568 ACSBG2Q5FVE4 666 aa10.04□□□□□ -0.8
PTP4A1-207ENST00000639568 BEX5Q5H9J7 111 aa10.04□□□□□ -0.8
PTP4A1-207ENST00000639568 SCIMPQ6UWF3 145 aa10.04□□□□□ -0.8
PTP4A1-207ENST00000639568 SH2D5Q6ZV89 423 aa10.04□□□□□ -0.8
PTP4A1-207ENST00000639568 BBS12Q6ZW61 710 aa10.04□□□□□ -0.8
PTP4A1-207ENST00000639568 ZNF550Q7Z398 422 aa10.04□□□□□ -0.8
PTP4A1-207ENST00000639568 MEX3DQ86XN8 651 aaKnown RBP10.04□□□□□ -0.8
PTP4A1-207ENST00000639568 KLHDC8BQ8IXV7 354 aa10.04□□□□□ -0.8
PTP4A1-207ENST00000639568 LRRC56Q8IYG6 542 aaPredicted RBP10.04□□□□□ -0.8
PTP4A1-207ENST00000639568 OTUD6BQ8N6M0 293 aa10.04□□□□□ -0.8
PTP4A1-207ENST00000639568 OR8K3Q8NH51 312 aa10.04□□□□□ -0.8
PTP4A1-207ENST00000639568 WNT2BQ93097 391 aa10.04□□□□□ -0.8
PTP4A1-207ENST00000639568 ANKRD9Q96BM1 317 aaPredicted RBP10.04□□□□□ -0.8
PTP4A1-207ENST00000639568 ALKBH8Q96BT7 664 aaKnown RBP10.04□□□□□ -0.8
PTP4A1-207ENST00000639568 MARK4Q96L34 752 aa10.04□□□□□ -0.8
PTP4A1-207ENST00000639568 ZNF597Q96LX8 424 aa10.04□□□□□ -0.8
PTP4A1-207ENST00000639568 KRT12Q99456 494 aa10.04□□□□□ -0.8
PTP4A1-207ENST00000639568 UGT2B28Q9BY64 529 aa10.04□□□□□ -0.8
PTP4A1-207ENST00000639568 C12orf65Q9H3J6 166 aaKnown RBP10.04□□□□□ -0.8
PTP4A1-207ENST00000639568 PRTFDC1Q9NRG1 225 aa10.04□□□□□ -0.8
PTP4A1-207ENST00000639568 MARCH4Q9P2E8 410 aaPredicted RBP10.04□□□□□ -0.8
PTP4A1-207ENST00000639568 COPS7AQ9UBW8 275 aa10.04□□□□□ -0.8
PTP4A1-207ENST00000639568 RIMKLBQ9ULI2 386 aa10.04□□□□□ -0.8
PTP4A1-207ENST00000639568 WIF1Q9Y5W5 379 aa10.04□□□□□ -0.8
PTP4A1-207ENST00000639568 SERINC4A6NH21 518 aa10.03□□□□□ -0.8
PTP4A1-207ENST00000639568 E5RI56 91 aa10.03□□□□□ -0.8
PTP4A1-207ENST00000639568 PSTPIP1O43586 416 aa10.03□□□□□ -0.8
PTP4A1-207ENST00000639568 NRDCO43847 1150 aa10.03□□□□□ -0.8
PTP4A1-207ENST00000639568 DSCAMO60469 2012 aa10.03□□□□□ -0.8
PTP4A1-207ENST00000639568 ZNF354AO60765 605 aaPredicted RBP10.03□□□□□ -0.8
PTP4A1-207ENST00000639568 NIPSNAP2O75323 286 aa10.03□□□□□ -0.8
PTP4A1-207ENST00000639568 ZNF189O75820 626 aaPredicted RBP10.03□□□□□ -0.8
PTP4A1-207ENST00000639568 CDH1P12830 882 aa10.03□□□□□ -0.8
PTP4A1-207ENST00000639568 POU2F1P14859 743 aa10.03□□□□□ -0.8
PTP4A1-207ENST00000639568 HNF1AP20823 631 aa10.03□□□□□ -0.8
PTP4A1-207ENST00000639568 COMTP21964 271 aa10.03□□□□□ -0.8
PTP4A1-207ENST00000639568 ADRA1DP25100 572 aa10.03□□□□□ -0.8
PTP4A1-207ENST00000639568 FMO4P31512 558 aa10.03□□□□□ -0.8
PTP4A1-207ENST00000639568 ACVR1Q04771 509 aa10.03□□□□□ -0.8
PTP4A1-207ENST00000639568 SQLEQ14534 574 aa10.03□□□□□ -0.8
PTP4A1-207ENST00000639568 GBX1Q14549 363 aa10.03□□□□□ -0.8
PTP4A1-207ENST00000639568 KCNJ11Q14654 390 aa10.03□□□□□ -0.8
PTP4A1-207ENST00000639568 MPEG1Q2M385 716 aa10.03□□□□□ -0.8
PTP4A1-207ENST00000639568 ZNF791Q3KP31 576 aaPredicted RBP10.03□□□□□ -0.8
PTP4A1-207ENST00000639568 PIGGQ5H8A4 983 aa10.03□□□□□ -0.8
PTP4A1-207ENST00000639568 NHSL2Q5HYW2 709 aa10.03□□□□□ -0.8
PTP4A1-207ENST00000639568 CYB5R2Q6BCY4 276 aa10.03□□□□□ -0.8
PTP4A1-207ENST00000639568 SCUBE1Q8IWY4 988 aa10.03□□□□□ -0.8
PTP4A1-207ENST00000639568 REXO1L1PQ8IX06 675 aa10.03□□□□□ -0.8
PTP4A1-207ENST00000639568 RHOT2Q8IXI1 618 aa10.03□□□□□ -0.8
PTP4A1-207ENST00000639568 MPP5Q8N3R9 675 aa10.03□□□□□ -0.8
PTP4A1-207ENST00000639568 OR52K1Q8NGK4 314 aa10.03□□□□□ -0.8
PTP4A1-207ENST00000639568 OR14A16Q8NHC5 309 aa10.03□□□□□ -0.8
PTP4A1-207ENST00000639568 ACTL9Q8TC94 416 aa10.03□□□□□ -0.8
PTP4A1-207ENST00000639568 UTP15Q8TED0 518 aaKnown RBP10.03□□□□□ -0.8
PTP4A1-207ENST00000639568 HS6ST2Q96MM7 605 aa10.03□□□□□ -0.8
PTP4A1-207ENST00000639568 ZNF778Q96MU6 729 aa10.03□□□□□ -0.8
PTP4A1-207ENST00000639568 RUNDC3BQ96NL0 473 aa10.03□□□□□ -0.8
PTP4A1-207ENST00000639568 TNFRSF13CQ96RJ3 184 aa10.03□□□□□ -0.8
PTP4A1-207ENST00000639568 ESRP2Q9H6T0 727 aaKnown RBP10.03□□□□□ -0.8
PTP4A1-207ENST00000639568 ELOVL5Q9NYP7 299 aa10.03□□□□□ -0.8
PTP4A1-207ENST00000639568 MRPS33Q9Y291 106 aaKnown RBP10.03□□□□□ -0.8
PTP4A1-207ENST00000639568 ARHGAP21Q5T5U3 1957 aa10.03□□□□□ -0.8
PTP4A1-207ENST00000639568 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.02□□□□□ -0.81
PTP4A1-207ENST00000639568 H0Y3Z8 333 aa10.02□□□□□ -0.81
PTP4A1-207ENST00000639568 GFYI3L273 518 aa10.02□□□□□ -0.81
PTP4A1-207ENST00000639568 PFDN6O15212 129 aa10.02□□□□□ -0.81
PTP4A1-207ENST00000639568 TCF21O43680 179 aa10.02□□□□□ -0.81
PTP4A1-207ENST00000639568 LMX1BO60663 402 aa10.02□□□□□ -0.81
PTP4A1-207ENST00000639568 METTL18O95568 372 aa10.02□□□□□ -0.81
PTP4A1-207ENST00000639568 HPNP05981 417 aa10.02□□□□□ -0.81
PTP4A1-207ENST00000639568 LOXP28300 417 aaPredicted RBP10.02□□□□□ -0.81
PTP4A1-207ENST00000639568 IMPA1P29218 277 aa10.02□□□□□ -0.81
PTP4A1-207ENST00000639568 SLCO1A2P46721 670 aa10.02□□□□□ -0.81
PTP4A1-207ENST00000639568 CDK9P50750 372 aaKnown RBP10.02□□□□□ -0.81
PTP4A1-207ENST00000639568 CCR8P51685 355 aa10.02□□□□□ -0.81
PTP4A1-207ENST00000639568 CCZ1BP86790 482 aa10.02□□□□□ -0.81
PTP4A1-207ENST00000639568 CCZ1P86791 482 aaPredicted RBP10.02□□□□□ -0.81
PTP4A1-207ENST00000639568 SRYQ05066 204 aa10.02□□□□□ -0.81
PTP4A1-207ENST00000639568 CTSL3PQ5NE16 218 aa10.02□□□□□ -0.81
PTP4A1-207ENST00000639568 TBCELQ5QJ74 424 aa10.02□□□□□ -0.81
PTP4A1-207ENST00000639568 ADGRD1Q6QNK2 874 aa10.02□□□□□ -0.81
PTP4A1-207ENST00000639568 SASS6Q6UVJ0 657 aa10.02□□□□□ -0.81
PTP4A1-207ENST00000639568 PPP1R21Q6ZMI0 780 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms