RNA–Protein interactions for RNA: ENST00000638794.1

SMN2-216, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-216ENST00000638794 BBOF1Q8ND07 529 aa15.66■□□□□ 0.1
SMN2-216ENST00000638794 PTPMT1Q8WUK0 201 aaPredicted RBP15.66■□□□□ 0.1
SMN2-216ENST00000638794 EXT2Q93063 718 aa15.66■□□□□ 0.1
SMN2-216ENST00000638794 KCNC2Q96PR1 638 aa15.66■□□□□ 0.1
SMN2-216ENST00000638794 RASL10BQ96S79 203 aa15.66■□□□□ 0.1
SMN2-216ENST00000638794 CPNE1Q99829 537 aa15.66■□□□□ 0.1
SMN2-216ENST00000638794 ALOXE3Q9BYJ1 711 aa15.66■□□□□ 0.1
SMN2-216ENST00000638794 ENKD1Q9H0I2 346 aa15.66■□□□□ 0.1
SMN2-216ENST00000638794 DPH5Q9H2P9 285 aa15.66■□□□□ 0.1
SMN2-216ENST00000638794 CD274Q9NZQ7 290 aa15.66■□□□□ 0.1
SMN2-216ENST00000638794 VTI1BQ9UEU0 232 aa15.66■□□□□ 0.1
SMN2-216ENST00000638794 PTBP2Q9UKA9 531 aaKnown RBP15.66■□□□□ 0.1
SMN2-216ENST00000638794 PHF3Q92576 2039 aaKnown RBP15.66■□□□□ 0.1
SMN2-216ENST00000638794 HCFC1P51610 2035 aa15.65■□□□□ 0.1
SMN2-216ENST00000638794 INTS1Q8N201 2190 aaKnown RBP15.65■□□□□ 0.1
SMN2-216ENST00000638794 A0A0G2JMM0 328 aa15.65■□□□□ 0.1
SMN2-216ENST00000638794 A0A1W2PPB8 328 aa15.65■□□□□ 0.1
SMN2-216ENST00000638794 A0A1W2PRS3 328 aa15.65■□□□□ 0.1
SMN2-216ENST00000638794 SYNDIG1LA6NDD5 238 aa15.65■□□□□ 0.1
SMN2-216ENST00000638794 KIR3DP1A8MWS1 328 aa15.65■□□□□ 0.1
SMN2-216ENST00000638794 WWP2O00308 870 aa15.65■□□□□ 0.1
SMN2-216ENST00000638794 CCNT2O60583 730 aaKnown RBP15.65■□□□□ 0.1
SMN2-216ENST00000638794 C1QAP02745 245 aa15.65■□□□□ 0.1
SMN2-216ENST00000638794 GMPRP36959 345 aa15.65■□□□□ 0.1
SMN2-216ENST00000638794 SOX3P41225 446 aa15.65■□□□□ 0.1
SMN2-216ENST00000638794 STX4Q12846 297 aa15.65■□□□□ 0.1
SMN2-216ENST00000638794 CHIT1Q13231 466 aa15.65■□□□□ 0.1
SMN2-216ENST00000638794 EFTUD2Q15029 972 aaKnown RBP eCLIP15.65■□□□□ 0.1
SMN2-216ENST00000638794 PAGE2BQ5JRK9 111 aa15.65■□□□□ 0.1
SMN2-216ENST00000638794 UBE3DQ7Z6J8 389 aa15.65■□□□□ 0.1
SMN2-216ENST00000638794 GPALPP1Q8IXQ4 340 aa15.65■□□□□ 0.1
SMN2-216ENST00000638794 ZNF321PQ8N8H1 164 aa15.65■□□□□ 0.1
SMN2-216ENST00000638794 MORN4Q8NDC4 146 aa15.65■□□□□ 0.1
SMN2-216ENST00000638794 OR2M7Q8NG81 312 aa15.65■□□□□ 0.1
SMN2-216ENST00000638794 OR14A16Q8NHC5 309 aa15.65■□□□□ 0.1
SMN2-216ENST00000638794 DAZLQ92904 295 aaKnown RBP15.65■□□□□ 0.1
SMN2-216ENST00000638794 KIAA1191Q96A73 305 aa15.65■□□□□ 0.1
SMN2-216ENST00000638794 C14orf79Q96F83 325 aa15.65■□□□□ 0.1
SMN2-216ENST00000638794 UBXN10Q96LJ8 280 aa15.65■□□□□ 0.1
SMN2-216ENST00000638794 MAPKAP1Q9BPZ7 522 aa15.65■□□□□ 0.1
SMN2-216ENST00000638794 MS4A8Q9BY19 250 aa15.65■□□□□ 0.1
SMN2-216ENST00000638794 OR8D2Q9GZM6 311 aa15.65■□□□□ 0.1
SMN2-216ENST00000638794 DEFB127Q9H1M4 99 aa15.65■□□□□ 0.1
SMN2-216ENST00000638794 LYRM4Q9HD34 91 aa15.65■□□□□ 0.1
SMN2-216ENST00000638794 RNF112Q9ULX5 631 aa15.65■□□□□ 0.1
SMN2-216ENST00000638794 HIVEP1P15822 2718 aa15.64■□□□□ 0.09
SMN2-216ENST00000638794 FAM159BA6NKW6 160 aa15.64■□□□□ 0.09
SMN2-216ENST00000638794 C17orf105B2RV13 164 aa15.64■□□□□ 0.09
SMN2-216ENST00000638794 G3V3Y1 287 aa15.64■□□□□ 0.09
SMN2-216ENST00000638794 RTCAO00442 366 aaKnown RBP15.64■□□□□ 0.09
SMN2-216ENST00000638794 LDB3O75112 727 aa15.64■□□□□ 0.09
SMN2-216ENST00000638794 GP5P40197 560 aa15.64■□□□□ 0.09
SMN2-216ENST00000638794 MSH2P43246 934 aa15.64■□□□□ 0.09
SMN2-216ENST00000638794 HK2P52789 917 aa15.64■□□□□ 0.09
SMN2-216ENST00000638794 RAB10P61026 200 aa15.64■□□□□ 0.09
SMN2-216ENST00000638794 PPIAP62937 165 aaKnown RBP15.64■□□□□ 0.09
SMN2-216ENST00000638794 IRF8Q02556 426 aa15.64■□□□□ 0.09
SMN2-216ENST00000638794 CALCOCO2Q13137 446 aa15.64■□□□□ 0.09
SMN2-216ENST00000638794 LAPTM5Q13571 262 aa15.64■□□□□ 0.09
SMN2-216ENST00000638794 TBCCQ15814 346 aa15.64■□□□□ 0.09
SMN2-216ENST00000638794 HIST2H2ACQ16777 129 aaPredicted RBP15.64■□□□□ 0.09
SMN2-216ENST00000638794 EMC4Q5J8M3 183 aa15.64■□□□□ 0.09
SMN2-216ENST00000638794 HIST2H2AA3Q6FI13 130 aa15.64■□□□□ 0.09
SMN2-216ENST00000638794 MEX3BQ6ZN04 569 aaKnown RBP15.64■□□□□ 0.09
SMN2-216ENST00000638794 CEP128Q6ZU80 1094 aa15.64■□□□□ 0.09
SMN2-216ENST00000638794 RPRMLQ8N4K4 120 aa15.64■□□□□ 0.09
SMN2-216ENST00000638794 SLC2A12Q8TD20 617 aa15.64■□□□□ 0.09
SMN2-216ENST00000638794 ZNF473Q8WTR7 871 aaKnown RBP15.64■□□□□ 0.09
SMN2-216ENST00000638794 ERP44Q9BS26 406 aa15.64■□□□□ 0.09
SMN2-216ENST00000638794 CD244Q9BZW8 370 aa15.64■□□□□ 0.09
SMN2-216ENST00000638794 TP63Q9H3D4 680 aaPredicted RBP15.64■□□□□ 0.09
SMN2-216ENST00000638794 WHRNQ9P202 907 aa15.64■□□□□ 0.09
SMN2-216ENST00000638794 RNF14Q9UBS8 474 aa15.64■□□□□ 0.09
SMN2-216ENST00000638794 FAM166BA8MTA8 275 aa15.63■□□□□ 0.09
SMN2-216ENST00000638794 EIF3HO15372 352 aaKnown RBP eCLIP15.63■□□□□ 0.09
SMN2-216ENST00000638794 SH3BGRLO75368 114 aa15.63■□□□□ 0.09
SMN2-216ENST00000638794 S100BP04271 92 aaPredicted RBP15.63■□□□□ 0.09
SMN2-216ENST00000638794 TNNI3P19429 210 aa15.63■□□□□ 0.09
SMN2-216ENST00000638794 ATP5A1P25705 553 aaKnown RBP15.63■□□□□ 0.09
SMN2-216ENST00000638794 RNF4P78317 190 aa15.63■□□□□ 0.09
SMN2-216ENST00000638794 PLGLB1Q02325 96 aa15.63■□□□□ 0.09
SMN2-216ENST00000638794 ID2Q02363 134 aa15.63■□□□□ 0.09
SMN2-216ENST00000638794 E2F2Q14209 437 aa15.63■□□□□ 0.09
SMN2-216ENST00000638794 ZNF750Q32MQ0 723 aa15.63■□□□□ 0.09
SMN2-216ENST00000638794 TMEM211Q6ICI0 200 aa15.63■□□□□ 0.09
SMN2-216ENST00000638794 C3orf62Q6ZUJ4 267 aa15.63■□□□□ 0.09
SMN2-216ENST00000638794 CYS1Q717R9 158 aa15.63■□□□□ 0.09
SMN2-216ENST00000638794 LRRC70Q7Z2Q7 622 aa15.63■□□□□ 0.09
SMN2-216ENST00000638794 ACOT4Q8N9L9 421 aa15.63■□□□□ 0.09
SMN2-216ENST00000638794 SRFBP1Q8NEF9 429 aaKnown RBP15.63■□□□□ 0.09
SMN2-216ENST00000638794 CHTF18Q8WVB6 975 aa15.63■□□□□ 0.09
SMN2-216ENST00000638794 SCYL1Q96KG9 808 aa15.63■□□□□ 0.09
SMN2-216ENST00000638794 TREX2Q9BQ50 279 aaPredicted RBP15.63■□□□□ 0.09
SMN2-216ENST00000638794 TBCDQ9BTW9 1192 aa15.63■□□□□ 0.09
SMN2-216ENST00000638794 TTTY12Q9BZ98 90 aa15.63■□□□□ 0.09
SMN2-216ENST00000638794 ROGDIQ9GZN7 287 aa15.63■□□□□ 0.09
SMN2-216ENST00000638794 ALG9Q9H6U8 611 aa15.63■□□□□ 0.09
SMN2-216ENST00000638794 ZDHHC11Q9H8X9 412 aa15.63■□□□□ 0.09
SMN2-216ENST00000638794 GRHL1Q9NZI5 618 aa15.63■□□□□ 0.09
SMN2-216ENST00000638794 ITGB1BP2Q9UKP3 347 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms