RNA–Protein interactions for RNA: ENST00000638142.2

SYNGAP1-227, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 2,499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-227ENST00000638142 RECKO95980 971 aa19.2■□□□□ 0.66
SYNGAP1-227ENST00000638142 DSTNP60981 165 aa19.2■□□□□ 0.66
SYNGAP1-227ENST00000638142 SNRPGP62308 76 aaKnown RBP19.2■□□□□ 0.66
SYNGAP1-227ENST00000638142 IKBIPQ70UQ0 350 aa19.2■□□□□ 0.66
SYNGAP1-227ENST00000638142 CELF2-AS1Q8N7Q2 184 aa19.2■□□□□ 0.66
SYNGAP1-227ENST00000638142 SETD6Q8TBK2 473 aa19.2■□□□□ 0.66
SYNGAP1-227ENST00000638142 TMCO6Q96DC7 493 aa19.2■□□□□ 0.66
SYNGAP1-227ENST00000638142 KCNS3Q9BQ31 491 aa19.2■□□□□ 0.66
SYNGAP1-227ENST00000638142 OR51B5Q9H339 312 aa19.2■□□□□ 0.66
SYNGAP1-227ENST00000638142 SMURF1Q9HCE7 757 aa19.2■□□□□ 0.66
SYNGAP1-227ENST00000638142 FAM172BPA6NC97 362 aa19.19■□□□□ 0.66
SYNGAP1-227ENST00000638142 SAP18O00422 153 aaKnown RBP19.19■□□□□ 0.66
SYNGAP1-227ENST00000638142 TEX28O15482 410 aa19.19■□□□□ 0.66
SYNGAP1-227ENST00000638142 LEFTY1O75610 366 aa19.19■□□□□ 0.66
SYNGAP1-227ENST00000638142 KLHL18O94889 574 aa19.19■□□□□ 0.66
SYNGAP1-227ENST00000638142 SLITRK5O94991 958 aa19.19■□□□□ 0.66
SYNGAP1-227ENST00000638142 INHAP05111 366 aa19.19■□□□□ 0.66
SYNGAP1-227ENST00000638142 TIMP2P16035 220 aa19.19■□□□□ 0.66
SYNGAP1-227ENST00000638142 ENDOUP21128 410 aaKnown RBP19.19■□□□□ 0.66
SYNGAP1-227ENST00000638142 CCL23P55773 120 aa19.19■□□□□ 0.66
SYNGAP1-227ENST00000638142 MEDAGQ5VYS4 303 aa19.19■□□□□ 0.66
SYNGAP1-227ENST00000638142 REEP3Q6NUK4 255 aa19.19■□□□□ 0.66
SYNGAP1-227ENST00000638142 ZNF544Q6NX49 715 aa19.19■□□□□ 0.66
SYNGAP1-227ENST00000638142 TMEM220Q6QAJ8 160 aa19.19■□□□□ 0.66
SYNGAP1-227ENST00000638142 PRR23CQ6ZRP0 262 aa19.19■□□□□ 0.66
SYNGAP1-227ENST00000638142 TECPR1Q7Z6L1 1165 aa19.19■□□□□ 0.66
SYNGAP1-227ENST00000638142 TMEM25Q86YD3 366 aa19.19■□□□□ 0.66
SYNGAP1-227ENST00000638142 SGPP1Q9BX95 441 aa19.19■□□□□ 0.66
SYNGAP1-227ENST00000638142 TMEM121BQ9BXQ6 578 aaPredicted RBP19.19■□□□□ 0.66
SYNGAP1-227ENST00000638142 ITM2CQ9NQX7 267 aa19.19■□□□□ 0.66
SYNGAP1-227ENST00000638142 A0A1W2PRU2 124 aa19.19■□□□□ 0.66
SYNGAP1-227ENST00000638142 GJA1P17302 382 aa19.19■□□□□ 0.66
SYNGAP1-227ENST00000638142 UQCRC2P22695 453 aa19.19■□□□□ 0.66
SYNGAP1-227ENST00000638142 POU1F1P28069 291 aa19.19■□□□□ 0.66
SYNGAP1-227ENST00000638142 TNFSF8P32971 234 aa19.19■□□□□ 0.66
SYNGAP1-227ENST00000638142 CSTF2P33240 577 aaKnown RBP eCLIP19.19■□□□□ 0.66
SYNGAP1-227ENST00000638142 TP53BP2Q13625 1128 aa19.19■□□□□ 0.66
SYNGAP1-227ENST00000638142 TMC5Q6UXY8 1006 aa19.19■□□□□ 0.66
SYNGAP1-227ENST00000638142 DEFB128Q7Z7B8 93 aa19.19■□□□□ 0.66
SYNGAP1-227ENST00000638142 TRIM69Q86WT6 500 aa19.19■□□□□ 0.66
SYNGAP1-227ENST00000638142 GALNT6Q8NCL4 622 aa19.19■□□□□ 0.66
SYNGAP1-227ENST00000638142 SMG9Q9H0W8 520 aaKnown RBP19.19■□□□□ 0.66
SYNGAP1-227ENST00000638142 HHATLQ9HCP6 504 aa19.19■□□□□ 0.66
SYNGAP1-227ENST00000638142 RHCGQ9UBD6 479 aa19.19■□□□□ 0.66
SYNGAP1-227ENST00000638142 NDOR1Q9UHB4 597 aa19.19■□□□□ 0.66
SYNGAP1-227ENST00000638142 ZNF221Q9UK13 617 aa19.19■□□□□ 0.66
SYNGAP1-227ENST00000638142 SH2B3Q9UQQ2 575 aa19.19■□□□□ 0.66
SYNGAP1-227ENST00000638142 LSM2Q9Y333 95 aaKnown RBP19.19■□□□□ 0.66
SYNGAP1-227ENST00000638142 DOCK6Q96HP0 2047 aa19.19■□□□□ 0.66
SYNGAP1-227ENST00000638142 TLR4O00206 839 aa19.18■□□□□ 0.66
SYNGAP1-227ENST00000638142 IDH3BO43837 385 aa19.18■□□□□ 0.66
SYNGAP1-227ENST00000638142 ENTPD6O75354 484 aa19.18■□□□□ 0.66
SYNGAP1-227ENST00000638142 OSMP13725 252 aa19.18■□□□□ 0.66
SYNGAP1-227ENST00000638142 PBLDP30039 288 aaPredicted RBP19.18■□□□□ 0.66
SYNGAP1-227ENST00000638142 DUSP7Q16829 419 aa19.18■□□□□ 0.66
SYNGAP1-227ENST00000638142 TMEM201Q5SNT2 666 aa19.18■□□□□ 0.66
SYNGAP1-227ENST00000638142 DDX53Q86TM3 631 aaKnown RBP19.18■□□□□ 0.66
SYNGAP1-227ENST00000638142 OR6F1Q8NGZ6 308 aa19.18■□□□□ 0.66
SYNGAP1-227ENST00000638142 LILRB4Q8NHJ6 448 aa19.18■□□□□ 0.66
SYNGAP1-227ENST00000638142 APOBEC4Q8WW27 367 aaKnown RBP19.18■□□□□ 0.66
SYNGAP1-227ENST00000638142 PDXPQ96GD0 296 aa19.18■□□□□ 0.66
SYNGAP1-227ENST00000638142 SNX18Q96RF0 628 aa19.18■□□□□ 0.66
SYNGAP1-227ENST00000638142 ASPNQ9BXN1 380 aa19.18■□□□□ 0.66
SYNGAP1-227ENST00000638142 NLNQ9BYT8 704 aa19.18■□□□□ 0.66
SYNGAP1-227ENST00000638142 ICKQ9UPZ9 632 aa19.18■□□□□ 0.66
SYNGAP1-227ENST00000638142 WBP11Q9Y2W2 641 aaKnown RBP19.18■□□□□ 0.66
SYNGAP1-227ENST00000638142 NEDD8-MDP1E9PL57 170 aa19.18■□□□□ 0.66
SYNGAP1-227ENST00000638142 KLK1P06870 262 aa19.18■□□□□ 0.66
SYNGAP1-227ENST00000638142 HELZP42694 1942 aaKnown RBP19.18■□□□□ 0.66
SYNGAP1-227ENST00000638142 ATN1P54259 1190 aaPredicted RBP19.18■□□□□ 0.66
SYNGAP1-227ENST00000638142 TSTA3Q13630 321 aaPredicted RBP19.18■□□□□ 0.66
SYNGAP1-227ENST00000638142 PUM1Q14671 1186 aaKnown RBP eCLIP19.18■□□□□ 0.66
SYNGAP1-227ENST00000638142 SPATC1Q76KD6 591 aa19.18■□□□□ 0.66
SYNGAP1-227ENST00000638142 DPPA4Q7L190 304 aa19.18■□□□□ 0.66
SYNGAP1-227ENST00000638142 NANOGNBQ7Z5D8 188 aa19.18■□□□□ 0.66
SYNGAP1-227ENST00000638142 KLHL6Q8WZ60 621 aa19.18■□□□□ 0.66
SYNGAP1-227ENST00000638142 SLC46A2Q9BY10 475 aa19.18■□□□□ 0.66
SYNGAP1-227ENST00000638142 UCK2Q9BZX2 261 aa19.18■□□□□ 0.66
SYNGAP1-227ENST00000638142 CCDC177Q9NQR7 707 aaPredicted RBP19.18■□□□□ 0.66
SYNGAP1-227ENST00000638142 C14orf119Q9NWQ9 140 aa19.18■□□□□ 0.66
SYNGAP1-227ENST00000638142 ERVK13-1Q9NX77 482 aa19.18■□□□□ 0.66
SYNGAP1-227ENST00000638142 TMCC3Q9ULS5 477 aa19.18■□□□□ 0.66
SYNGAP1-227ENST00000638142 GRIP1Q9Y3R0 1128 aa19.18■□□□□ 0.66
SYNGAP1-227ENST00000638142 H3BQ06 376 aaPredicted RBP19.17■□□□□ 0.66
SYNGAP1-227ENST00000638142 NRG2O14511 850 aaPredicted RBP19.17■□□□□ 0.66
SYNGAP1-227ENST00000638142 FFAR1O14842 300 aa19.17■□□□□ 0.66
SYNGAP1-227ENST00000638142 LRG1P02750 347 aa19.17■□□□□ 0.66
SYNGAP1-227ENST00000638142 XPAP23025 273 aaPredicted RBP19.17■□□□□ 0.66
SYNGAP1-227ENST00000638142 HTR3AP46098 478 aa19.17■□□□□ 0.66
SYNGAP1-227ENST00000638142 OR2B6P58173 313 aa19.17■□□□□ 0.66
SYNGAP1-227ENST00000638142 ILKQ13418 452 aa19.17■□□□□ 0.66
SYNGAP1-227ENST00000638142 DOC2BQ14184 412 aa19.17■□□□□ 0.66
SYNGAP1-227ENST00000638142 LRRC26Q2I0M4 334 aa19.17■□□□□ 0.66
SYNGAP1-227ENST00000638142 PRSS53Q2L4Q9 553 aa19.17■□□□□ 0.66
SYNGAP1-227ENST00000638142 ZNF658BQ4V348 819 aaPredicted RBP19.17■□□□□ 0.66
SYNGAP1-227ENST00000638142 ARSIQ5FYB1 569 aa19.17■□□□□ 0.66
SYNGAP1-227ENST00000638142 ADIPOR2Q86V24 386 aa19.17■□□□□ 0.66
SYNGAP1-227ENST00000638142 UBQLNLQ8IYU4 475 aa19.17■□□□□ 0.66
SYNGAP1-227ENST00000638142 SLC5A11Q8WWX8 675 aa19.17■□□□□ 0.66
SYNGAP1-227ENST00000638142 SLC6A16Q9GZN6 736 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms