RNA–Protein interactions for RNA: ENST00000638016.1

PNKP-230, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 109 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-230ENST00000638016 SP1P08047 785 aa16.52■□□□□ 0.24
PNKP-230ENST00000638016 FAM153BP0C7A2 387 aa16.52■□□□□ 0.24
PNKP-230ENST00000638016 RHOXF2BP0C7M4 288 aa16.52■□□□□ 0.24
PNKP-230ENST00000638016 GCAP28676 217 aa16.52■□□□□ 0.24
PNKP-230ENST00000638016 NEK2P51955 445 aa16.52■□□□□ 0.24
PNKP-230ENST00000638016 HNRNPH2P55795 449 aaKnown RBP16.52■□□□□ 0.24
PNKP-230ENST00000638016 FAM153CQ494X1 144 aa16.52■□□□□ 0.24
PNKP-230ENST00000638016 GLE1Q53GS7 698 aaKnown RBP16.52■□□□□ 0.24
PNKP-230ENST00000638016 CCDC91Q7Z6B0 441 aa16.52■□□□□ 0.24
PNKP-230ENST00000638016 PNPLA5Q7Z6Z6 429 aaPredicted RBP16.52■□□□□ 0.24
PNKP-230ENST00000638016 OR52B6Q8NGF0 335 aa16.52■□□□□ 0.24
PNKP-230ENST00000638016 KIF18AQ8NI77 898 aa16.52■□□□□ 0.24
PNKP-230ENST00000638016 ADAMTS18Q8TE60 1221 aa16.52■□□□□ 0.24
PNKP-230ENST00000638016 UBE2E3Q969T4 207 aa16.52■□□□□ 0.24
PNKP-230ENST00000638016 ANKRD9Q96BM1 317 aaPredicted RBP16.52■□□□□ 0.24
PNKP-230ENST00000638016 CMTM7Q96FZ5 175 aa16.52■□□□□ 0.24
PNKP-230ENST00000638016 RHOXF2Q9BQY4 288 aa16.52■□□□□ 0.24
PNKP-230ENST00000638016 TBCDQ9BTW9 1192 aa16.52■□□□□ 0.24
PNKP-230ENST00000638016 ZNF717Q9BY31 904 aaPredicted RBP16.52■□□□□ 0.24
PNKP-230ENST00000638016 ALOXE3Q9BYJ1 711 aa16.52■□□□□ 0.24
PNKP-230ENST00000638016 IPPKQ9H8X2 491 aa16.52■□□□□ 0.24
PNKP-230ENST00000638016 LYRM4Q9HD34 91 aa16.52■□□□□ 0.24
PNKP-230ENST00000638016 ADAP2Q9NPF8 381 aa16.52■□□□□ 0.24
PNKP-230ENST00000638016 MRPS33Q9Y291 106 aaKnown RBP16.52■□□□□ 0.24
PNKP-230ENST00000638016 A0A1B0GTL3 188 aa16.51■□□□□ 0.23
PNKP-230ENST00000638016 TMEM200CA6NKL6 621 aa16.51■□□□□ 0.23
PNKP-230ENST00000638016 FGF17O60258 216 aa16.51■□□□□ 0.23
PNKP-230ENST00000638016 ZG16O60844 167 aa16.51■□□□□ 0.23
PNKP-230ENST00000638016 CTNSO60931 367 aa16.51■□□□□ 0.23
PNKP-230ENST00000638016 SLC25A12O75746 678 aa16.51■□□□□ 0.23
PNKP-230ENST00000638016 CRYABP02511 175 aaKnown RBP16.51■□□□□ 0.23
PNKP-230ENST00000638016 STSP08842 583 aa16.51■□□□□ 0.23
PNKP-230ENST00000638016 SBK3P0C264 359 aa16.51■□□□□ 0.23
PNKP-230ENST00000638016 CD46P15529 392 aa16.51■□□□□ 0.23
PNKP-230ENST00000638016 HPDP32754 393 aaPredicted RBP16.51■□□□□ 0.23
PNKP-230ENST00000638016 CLCN2P51788 898 aa16.51■□□□□ 0.23
PNKP-230ENST00000638016 TGM3Q08188 693 aa16.51■□□□□ 0.23
PNKP-230ENST00000638016 MAPKAPK3Q16644 382 aa16.51■□□□□ 0.23
PNKP-230ENST00000638016 AP5B1Q2VPB7 878 aa16.51■□□□□ 0.23
PNKP-230ENST00000638016 TMEM35AQ53FP2 167 aa16.51■□□□□ 0.23
PNKP-230ENST00000638016 RNFT1Q5M7Z0 435 aa16.51■□□□□ 0.23
PNKP-230ENST00000638016 DEPDC1Q5TB30 811 aa16.51■□□□□ 0.23
PNKP-230ENST00000638016 C18orf63Q68DL7 685 aa16.51■□□□□ 0.23
PNKP-230ENST00000638016 SLC25A25Q6KCM7 469 aa16.51■□□□□ 0.23
PNKP-230ENST00000638016 DGAT2L6Q6ZPD8 337 aa16.51■□□□□ 0.23
PNKP-230ENST00000638016 CEP128Q6ZU80 1094 aa16.51■□□□□ 0.23
PNKP-230ENST00000638016 CPSF7Q8N684 471 aaKnown RBP16.51■□□□□ 0.23
PNKP-230ENST00000638016 PTPMT1Q8WUK0 201 aaPredicted RBP16.51■□□□□ 0.23
PNKP-230ENST00000638016 UCN3Q969E3 161 aa16.51■□□□□ 0.23
PNKP-230ENST00000638016 VMP1Q96GC9 406 aa16.51■□□□□ 0.23
PNKP-230ENST00000638016 NOL11Q9H8H0 719 aaKnown RBP16.51■□□□□ 0.23
PNKP-230ENST00000638016 ZBTB26Q9HCK0 441 aa16.51■□□□□ 0.23
PNKP-230ENST00000638016 SEC14L3Q9UDX4 400 aa16.51■□□□□ 0.23
PNKP-230ENST00000638016 PPIEQ9UNP9 301 aaKnown RBP16.51■□□□□ 0.23
PNKP-230ENST00000638016 EML6Q6ZMW3 1958 aa16.51■□□□□ 0.23
PNKP-230ENST00000638016 CACNA1DQ01668 2161 aa16.5■□□□□ 0.23
PNKP-230ENST00000638016 A0A087WUV0 522 aaPredicted RBP16.5■□□□□ 0.23
PNKP-230ENST00000638016 ASPDHA6ND91 283 aa16.5■□□□□ 0.23
PNKP-230ENST00000638016 NPIPA5E9PKD4 350 aa16.5■□□□□ 0.23
PNKP-230ENST00000638016 PPP6CO00743 305 aa16.5■□□□□ 0.23
PNKP-230ENST00000638016 TMPRSS11DO60235 418 aa16.5■□□□□ 0.23
PNKP-230ENST00000638016 EEDO75530 441 aaKnown RBP16.5■□□□□ 0.23
PNKP-230ENST00000638016 ITGA10O75578 1167 aa16.5■□□□□ 0.23
PNKP-230ENST00000638016 TSPAN8P19075 237 aa16.5■□□□□ 0.23
PNKP-230ENST00000638016 CPN2P22792 545 aa16.5■□□□□ 0.23
PNKP-230ENST00000638016 RFC3P40938 356 aa16.5■□□□□ 0.23
PNKP-230ENST00000638016 CYB561P49447 251 aa16.5■□□□□ 0.23
PNKP-230ENST00000638016 SERPINB9P50453 376 aa16.5■□□□□ 0.23
PNKP-230ENST00000638016 RAP1GDS1P52306 607 aa16.5■□□□□ 0.23
PNKP-230ENST00000638016 HSF1Q00613 529 aa16.5■□□□□ 0.23
PNKP-230ENST00000638016 SLAMF1Q13291 335 aa16.5■□□□□ 0.23
PNKP-230ENST00000638016 ZRSR2Q15696 482 aaKnown RBP16.5■□□□□ 0.23
PNKP-230ENST00000638016 LIPJQ5W064 366 aa16.5■□□□□ 0.23
PNKP-230ENST00000638016 ZNF787Q6DD87 383 aa16.5■□□□□ 0.23
PNKP-230ENST00000638016 OR4C11Q6IEV9 310 aa16.5■□□□□ 0.23
PNKP-230ENST00000638016 CHSY3Q70JA7 882 aa16.5■□□□□ 0.23
PNKP-230ENST00000638016 ARMC10Q8N2F6 343 aa16.5■□□□□ 0.23
PNKP-230ENST00000638016 DNAJB8Q8NHS0 232 aa16.5■□□□□ 0.23
PNKP-230ENST00000638016 WDR20Q8TBZ3 569 aa16.5■□□□□ 0.23
PNKP-230ENST00000638016 MTFMTQ96DP5 389 aaKnown RBP16.5■□□□□ 0.23
PNKP-230ENST00000638016 ZNF180Q9UJW8 692 aa16.5■□□□□ 0.23
PNKP-230ENST00000638016 PCTPQ9UKL6 214 aa16.5■□□□□ 0.23
PNKP-230ENST00000638016 NPIPA1Q9UND3 350 aa16.5■□□□□ 0.23
PNKP-230ENST00000638016 ATG4BQ9Y4P1 393 aa16.5■□□□□ 0.23
PNKP-230ENST00000638016 IKBKGQ9Y6K9 419 aa16.5■□□□□ 0.23
PNKP-230ENST00000638016 UNC79Q9P2D8 2635 aa16.49■□□□□ 0.23
PNKP-230ENST00000638016 GTF3C1Q12789 2109 aa16.49■□□□□ 0.23
PNKP-230ENST00000638016 TRGV8A0A0C4DH27 118 aa16.49■□□□□ 0.23
PNKP-230ENST00000638016 EXOC1LA0A1B0GW35 172 aa16.49■□□□□ 0.23
PNKP-230ENST00000638016 ARHGAP10A1A4S6 786 aa16.49■□□□□ 0.23
PNKP-230ENST00000638016 H0YIV9 168 aa16.49■□□□□ 0.23
PNKP-230ENST00000638016 KIF2AO00139 706 aaPredicted RBP16.49■□□□□ 0.23
PNKP-230ENST00000638016 NME2P1O60361 137 aa16.49■□□□□ 0.23
PNKP-230ENST00000638016 GBAP04062 536 aa16.49■□□□□ 0.23
PNKP-230ENST00000638016 NME2P22392 152 aa16.49■□□□□ 0.23
PNKP-230ENST00000638016 TRHRP34981 398 aaPredicted RBP16.49■□□□□ 0.23
PNKP-230ENST00000638016 ARL1P40616 181 aaPredicted RBP16.49■□□□□ 0.23
PNKP-230ENST00000638016 PIK3CBP42338 1070 aa16.49■□□□□ 0.23
PNKP-230ENST00000638016 HLCSP50747 726 aa16.49■□□□□ 0.23
PNKP-230ENST00000638016 STX4Q12846 297 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms