RNA–Protein interactions for RNA: ENST00000636916.1

SMARCA2-255, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 111 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-255ENST00000636916 HAUS8Q9BT25 410 aa11.32□□□□□ -0.6
SMARCA2-255ENST00000636916 ACKR4Q9NPB9 350 aa11.32□□□□□ -0.6
SMARCA2-255ENST00000636916 PRTFDC1Q9NRG1 225 aa11.32□□□□□ -0.6
SMARCA2-255ENST00000636916 SAMD15Q9P1V8 674 aa11.32□□□□□ -0.6
SMARCA2-255ENST00000636916 MTRF1LQ9UGC7 380 aaKnown RBP11.32□□□□□ -0.6
SMARCA2-255ENST00000636916 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.32□□□□□ -0.6
SMARCA2-255ENST00000636916 MIF4GDA9UHW6 222 aaKnown RBP11.31□□□□□ -0.6
SMARCA2-255ENST00000636916 AHRRA9YTQ3 701 aa11.31□□□□□ -0.6
SMARCA2-255ENST00000636916 EIF3FO00303 357 aaPredicted RBP11.31□□□□□ -0.6
SMARCA2-255ENST00000636916 CYR61O00622 381 aa11.31□□□□□ -0.6
SMARCA2-255ENST00000636916 PFDN6O15212 129 aa11.31□□□□□ -0.6
SMARCA2-255ENST00000636916 ARHGEF9O43307 516 aa11.31□□□□□ -0.6
SMARCA2-255ENST00000636916 GOSR1O95249 250 aa11.31□□□□□ -0.6
SMARCA2-255ENST00000636916 P04436 131 aa11.31□□□□□ -0.6
SMARCA2-255ENST00000636916 HNRNPH1P31943 449 aaKnown RBP11.31□□□□□ -0.6
SMARCA2-255ENST00000636916 SLC1A2P43004 574 aa11.31□□□□□ -0.6
SMARCA2-255ENST00000636916 TRPC1P48995 793 aa11.31□□□□□ -0.6
SMARCA2-255ENST00000636916 PGGT1BP53609 377 aa11.31□□□□□ -0.6
SMARCA2-255ENST00000636916 BTN3A2P78410 334 aa11.31□□□□□ -0.6
SMARCA2-255ENST00000636916 ELAVL1Q15717 326 aaKnown RBP11.31□□□□□ -0.6
SMARCA2-255ENST00000636916 PIGGQ5H8A4 983 aa11.31□□□□□ -0.6
SMARCA2-255ENST00000636916 TOR1AIP1Q5JTV8 583 aa11.31□□□□□ -0.6
SMARCA2-255ENST00000636916 DUPD1Q68J44 220 aa11.31□□□□□ -0.6
SMARCA2-255ENST00000636916 PRSS57Q6UWY2 283 aa11.31□□□□□ -0.6
SMARCA2-255ENST00000636916 RAD9BQ6WBX8 426 aa11.31□□□□□ -0.6
SMARCA2-255ENST00000636916 CAPN12Q6ZSI9 719 aa11.31□□□□□ -0.6
SMARCA2-255ENST00000636916 CAND1Q86VP6 1230 aaKnown RBP11.31□□□□□ -0.6
SMARCA2-255ENST00000636916 AGGF1Q8N302 714 aaeCLIP11.31□□□□□ -0.6
SMARCA2-255ENST00000636916 UBL4BQ8N7F7 174 aa11.31□□□□□ -0.6
SMARCA2-255ENST00000636916 PPP1R14CQ8TAE6 165 aa11.31□□□□□ -0.6
SMARCA2-255ENST00000636916 QRFPRQ96P65 431 aa11.31□□□□□ -0.6
SMARCA2-255ENST00000636916 CSF3RQ99062 836 aa11.31□□□□□ -0.6
SMARCA2-255ENST00000636916 TIMP4Q99727 224 aa11.31□□□□□ -0.6
SMARCA2-255ENST00000636916 PIP5K1AQ99755 562 aa11.31□□□□□ -0.6
SMARCA2-255ENST00000636916 EXO5Q9H790 373 aa11.31□□□□□ -0.6
SMARCA2-255ENST00000636916 VTI1BQ9UEU0 232 aa11.31□□□□□ -0.6
SMARCA2-255ENST00000636916 NPFFR2Q9Y5X5 522 aa11.31□□□□□ -0.6
SMARCA2-255ENST00000636916 CTAGE9A4FU28 777 aa11.3□□□□□ -0.6
SMARCA2-255ENST00000636916 CRLF1O75462 422 aa11.3□□□□□ -0.6
SMARCA2-255ENST00000636916 ETHE1O95571 254 aa11.3□□□□□ -0.6
SMARCA2-255ENST00000636916 C8GP07360 202 aa11.3□□□□□ -0.6
SMARCA2-255ENST00000636916 SERPINA6P08185 405 aa11.3□□□□□ -0.6
SMARCA2-255ENST00000636916 SOX18P35713 384 aa11.3□□□□□ -0.6
SMARCA2-255ENST00000636916 BASP1P80723 227 aaKnown RBP11.3□□□□□ -0.6
SMARCA2-255ENST00000636916 CCZ1BP86790 482 aa11.3□□□□□ -0.6
SMARCA2-255ENST00000636916 CCZ1P86791 482 aaPredicted RBP11.3□□□□□ -0.6
SMARCA2-255ENST00000636916 DUSP8Q13202 625 aa11.3□□□□□ -0.6
SMARCA2-255ENST00000636916 BMPR2Q13873 1038 aa11.3□□□□□ -0.6
SMARCA2-255ENST00000636916 PRAMEF20Q5VT98 475 aa11.3□□□□□ -0.6
SMARCA2-255ENST00000636916 NSUN5P2Q63ZY6 315 aa11.3□□□□□ -0.6
SMARCA2-255ENST00000636916 PAQR3Q6TCH7 311 aa11.3□□□□□ -0.6
SMARCA2-255ENST00000636916 YTHDF3Q7Z739 585 aaKnown RBP11.3□□□□□ -0.6
SMARCA2-255ENST00000636916 KIF18BQ86Y91 864 aa11.3□□□□□ -0.6
SMARCA2-255ENST00000636916 LACC1Q8IV20 430 aa11.3□□□□□ -0.6
SMARCA2-255ENST00000636916 P3H2Q8IVL5 708 aa11.3□□□□□ -0.6
SMARCA2-255ENST00000636916 TMEM132CQ8N3T6 1108 aa11.3□□□□□ -0.6
SMARCA2-255ENST00000636916 CCDC89Q8N998 374 aa11.3□□□□□ -0.6
SMARCA2-255ENST00000636916 FAM47BQ8NA70 645 aa11.3□□□□□ -0.6
SMARCA2-255ENST00000636916 MORN4Q8NDC4 146 aa11.3□□□□□ -0.6
SMARCA2-255ENST00000636916 TRPV3Q8NET8 790 aa11.3□□□□□ -0.6
SMARCA2-255ENST00000636916 OR8K3Q8NH51 312 aa11.3□□□□□ -0.6
SMARCA2-255ENST00000636916 PAQR8Q8TEZ7 354 aa11.3□□□□□ -0.6
SMARCA2-255ENST00000636916 ZNF721Q8TF20 911 aa11.3□□□□□ -0.6
SMARCA2-255ENST00000636916 SLC5A11Q8WWX8 675 aa11.3□□□□□ -0.6
SMARCA2-255ENST00000636916 SMPDL3BQ92485 455 aa11.3□□□□□ -0.6
SMARCA2-255ENST00000636916 TSNARE1Q96NA8 513 aa11.3□□□□□ -0.6
SMARCA2-255ENST00000636916 DACH2Q96NX9 599 aa11.3□□□□□ -0.6
SMARCA2-255ENST00000636916 YIPF4Q9BSR8 244 aa11.3□□□□□ -0.6
SMARCA2-255ENST00000636916 BDH2Q9BUT1 245 aa11.3□□□□□ -0.6
SMARCA2-255ENST00000636916 FRMD8P1Q9BZ68 369 aaPredicted RBP11.3□□□□□ -0.6
SMARCA2-255ENST00000636916 PRDM14Q9GZV8 571 aa11.3□□□□□ -0.6
SMARCA2-255ENST00000636916 ZFP64Q9NPA5 681 aa11.3□□□□□ -0.6
SMARCA2-255ENST00000636916 IKZF3Q9UKT9 509 aa11.3□□□□□ -0.6
SMARCA2-255ENST00000636916 USF3Q68DE3 2245 aa11.29□□□□□ -0.6
SMARCA2-255ENST00000636916 MBD3L4A6NDZ8 208 aaPredicted RBP11.29□□□□□ -0.6
SMARCA2-255ENST00000636916 MBD3L3A6NE82 208 aaPredicted RBP11.29□□□□□ -0.6
SMARCA2-255ENST00000636916 MBD3L5A6NJ08 208 aaPredicted RBP11.29□□□□□ -0.6
SMARCA2-255ENST00000636916 NRDCO43847 1150 aa11.29□□□□□ -0.6
SMARCA2-255ENST00000636916 TPSB2P20231 275 aa11.29□□□□□ -0.6
SMARCA2-255ENST00000636916 GABRB3P28472 473 aa11.29□□□□□ -0.6
SMARCA2-255ENST00000636916 CDKN2DP55273 166 aa11.29□□□□□ -0.6
SMARCA2-255ENST00000636916 RAB38P57729 211 aa11.29□□□□□ -0.6
SMARCA2-255ENST00000636916 PPP2R2BQ00005 443 aa11.29□□□□□ -0.6
SMARCA2-255ENST00000636916 ASPHQ12797 758 aa11.29□□□□□ -0.6
SMARCA2-255ENST00000636916 FOXF2Q12947 444 aa11.29□□□□□ -0.6
SMARCA2-255ENST00000636916 SLC13A2Q13183 592 aa11.29□□□□□ -0.6
SMARCA2-255ENST00000636916 SP140Q13342 867 aa11.29□□□□□ -0.6
SMARCA2-255ENST00000636916 DHX34Q14147 1143 aaKnown RBP11.29□□□□□ -0.6
SMARCA2-255ENST00000636916 CSHL1Q14406 222 aa11.29□□□□□ -0.6
SMARCA2-255ENST00000636916 CAPRIN1Q14444 709 aaKnown RBP11.29□□□□□ -0.6
SMARCA2-255ENST00000636916 TPSAB1Q15661 275 aa11.29□□□□□ -0.6
SMARCA2-255ENST00000636916 MPEG1Q2M385 716 aa11.29□□□□□ -0.6
SMARCA2-255ENST00000636916 DCST1Q5T197 706 aa11.29□□□□□ -0.6
SMARCA2-255ENST00000636916 ANKRD22Q5VYY1 191 aa11.29□□□□□ -0.6
SMARCA2-255ENST00000636916 SLC22A10Q63ZE4 541 aa11.29□□□□□ -0.6
SMARCA2-255ENST00000636916 OPN5Q6U736 354 aa11.29□□□□□ -0.6
SMARCA2-255ENST00000636916 ZNF595Q8IYB9 648 aa11.29□□□□□ -0.6
SMARCA2-255ENST00000636916 MBD3L2Q8NHZ7 208 aaPredicted RBP11.29□□□□□ -0.6
SMARCA2-255ENST00000636916 SLC2A12Q8TD20 617 aa11.29□□□□□ -0.6
SMARCA2-255ENST00000636916 MS4A6EQ96DS6 147 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms