RNA–Protein interactions for RNA: ENST00000636843.1

CTSD-208, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 1,512 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-208ENST00000636843 ICAM2P13598 275 aa11.91□□□□□ -0.5
CTSD-208ENST00000636843 GFAPP14136 432 aa11.91□□□□□ -0.5
CTSD-208ENST00000636843 CHRM3P20309 590 aa11.91□□□□□ -0.5
CTSD-208ENST00000636843 PRDX1Q06830 199 aaKnown RBP11.91□□□□□ -0.5
CTSD-208ENST00000636843 KPNB1Q14974 876 aaKnown RBP11.91□□□□□ -0.5
CTSD-208ENST00000636843 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.91□□□□□ -0.5
CTSD-208ENST00000636843 SP5Q6BEB4 398 aaPredicted RBP11.91□□□□□ -0.5
CTSD-208ENST00000636843 ZNF425Q6IV72 752 aa11.91□□□□□ -0.5
CTSD-208ENST00000636843 SUSD1Q6UWL2 747 aa11.91□□□□□ -0.5
CTSD-208ENST00000636843 FJX1Q86VR8 437 aa11.91□□□□□ -0.5
CTSD-208ENST00000636843 CLYBLQ8N0X4 340 aa11.91□□□□□ -0.5
CTSD-208ENST00000636843 CD200R1Q8TD46 325 aa11.91□□□□□ -0.5
CTSD-208ENST00000636843 STMN2Q93045 179 aa11.91□□□□□ -0.5
CTSD-208ENST00000636843 EXT2Q93063 718 aa11.91□□□□□ -0.5
CTSD-208ENST00000636843 RERGQ96A58 199 aaPredicted RBP11.91□□□□□ -0.5
CTSD-208ENST00000636843 MMABQ96EY8 250 aaPredicted RBP11.91□□□□□ -0.5
CTSD-208ENST00000636843 PDLIM5Q96HC4 596 aaKnown RBP11.91□□□□□ -0.5
CTSD-208ENST00000636843 ANKRD27Q96NW4 1050 aa11.91□□□□□ -0.5
CTSD-208ENST00000636843 OR2A5Q96R48 311 aa11.91□□□□□ -0.5
CTSD-208ENST00000636843 C1QTNF3Q9BXJ4 246 aa11.91□□□□□ -0.5
CTSD-208ENST00000636843 RNF32Q9H0A6 362 aa11.91□□□□□ -0.5
CTSD-208ENST00000636843 NDE1Q9NXR1 346 aa11.91□□□□□ -0.5
CTSD-208ENST00000636843 TSR3Q9UJK0 312 aaKnown RBP11.91□□□□□ -0.5
CTSD-208ENST00000636843 DHRS7Q9Y394 339 aa11.91□□□□□ -0.5
CTSD-208ENST00000636843 L3MBTL1Q9Y468 752 aa11.91□□□□□ -0.5
CTSD-208ENST00000636843 ABCA12Q86UK0 2595 aa11.91□□□□□ -0.5
CTSD-208ENST00000636843 LOC102723996A0A087X1L8 192 aa11.91□□□□□ -0.5
CTSD-208ENST00000636843 IGKV1-8A0A0C4DH67 115 aa11.91□□□□□ -0.5
CTSD-208ENST00000636843 TMEM233B4DJY2 109 aa11.91□□□□□ -0.5
CTSD-208ENST00000636843 ENTPD5O75356 428 aa11.91□□□□□ -0.5
CTSD-208ENST00000636843 JUNP05412 331 aaKnown RBP11.91□□□□□ -0.5
CTSD-208ENST00000636843 TDGF1P3P51864 188 aa11.91□□□□□ -0.5
CTSD-208ENST00000636843 CCNG1P51959 295 aa11.91□□□□□ -0.5
CTSD-208ENST00000636843 PNLIPRP1P54315 467 aa11.91□□□□□ -0.5
CTSD-208ENST00000636843 ABATP80404 500 aa11.91□□□□□ -0.5
CTSD-208ENST00000636843 SLC25A3Q00325 362 aa11.91□□□□□ -0.5
CTSD-208ENST00000636843 EEF1A2Q05639 463 aaKnown RBP11.91□□□□□ -0.5
CTSD-208ENST00000636843 CUL3Q13618 768 aa11.91□□□□□ -0.5
CTSD-208ENST00000636843 TSTA3Q13630 321 aaPredicted RBP11.91□□□□□ -0.5
CTSD-208ENST00000636843 CYLC2Q14093 348 aaPredicted RBP11.91□□□□□ -0.5
CTSD-208ENST00000636843 FAM53BQ14153 422 aa11.91□□□□□ -0.5
CTSD-208ENST00000636843 MAPRE2Q15555 327 aa11.91□□□□□ -0.5
CTSD-208ENST00000636843 PFKFB4Q16877 469 aa11.91□□□□□ -0.5
CTSD-208ENST00000636843 ACSBG2Q5FVE4 666 aa11.91□□□□□ -0.5
CTSD-208ENST00000636843 ICE2Q659A1 982 aa11.91□□□□□ -0.5
CTSD-208ENST00000636843 TMEM205Q6UW68 189 aa11.91□□□□□ -0.5
CTSD-208ENST00000636843 C16orf89Q6UX73 402 aa11.91□□□□□ -0.5
CTSD-208ENST00000636843 NEK10Q6ZWH5 1172 aa11.91□□□□□ -0.5
CTSD-208ENST00000636843 CHSY3Q70JA7 882 aa11.91□□□□□ -0.5
CTSD-208ENST00000636843 SPNS2Q8IVW8 549 aa11.91□□□□□ -0.5
CTSD-208ENST00000636843 SIRT6Q8N6T7 355 aa11.91□□□□□ -0.5
CTSD-208ENST00000636843 AMER3Q8N944 861 aa11.91□□□□□ -0.5
CTSD-208ENST00000636843 FBXO15Q8NCQ5 510 aaPredicted RBP11.91□□□□□ -0.5
CTSD-208ENST00000636843 DNAJB8Q8NHS0 232 aa11.91□□□□□ -0.5
CTSD-208ENST00000636843 MARVELD3Q96A59 401 aa11.91□□□□□ -0.5
CTSD-208ENST00000636843 PPP1R36Q96LQ0 422 aa11.91□□□□□ -0.5
CTSD-208ENST00000636843 TAAR6Q96RI8 345 aa11.91□□□□□ -0.5
CTSD-208ENST00000636843 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.91□□□□□ -0.56e-7■■■■□ 20.5
CTSD-208ENST00000636843 ZNF700Q9H0M5 742 aa11.91□□□□□ -0.5
CTSD-208ENST00000636843 RUBCNLQ9H714 662 aa11.91□□□□□ -0.5
CTSD-208ENST00000636843 ZBTB26Q9HCK0 441 aa11.91□□□□□ -0.5
CTSD-208ENST00000636843 PLA2G3Q9NZ20 509 aa11.91□□□□□ -0.5
CTSD-208ENST00000636843 KLHL42Q9P2K6 505 aa11.91□□□□□ -0.5
CTSD-208ENST00000636843 TAC3Q9UHF0 121 aa11.91□□□□□ -0.5
CTSD-208ENST00000636843 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.91□□□□□ -0.5
CTSD-208ENST00000636843 CROCCQ5TZA2 2017 aa11.9□□□□□ -0.5
CTSD-208ENST00000636843 A0A088AWK7 358 aa11.9□□□□□ -0.5
CTSD-208ENST00000636843 LOC100653049A0A140TA62 436 aa11.9□□□□□ -0.5
CTSD-208ENST00000636843 UBFD1O14562 309 aaKnown RBP11.9□□□□□ -0.5
CTSD-208ENST00000636843 FOXS1O43638 330 aa11.9□□□□□ -0.5
CTSD-208ENST00000636843 CCNT2O60583 730 aaKnown RBP11.9□□□□□ -0.5
CTSD-208ENST00000636843 SKAP2O75563 359 aaPredicted RBP11.9□□□□□ -0.5
CTSD-208ENST00000636843 KRT34O76011 436 aa11.9□□□□□ -0.5
CTSD-208ENST00000636843 ANP32DO95626 131 aa11.9□□□□□ -0.5
CTSD-208ENST00000636843 TSPAN12O95859 305 aa11.9□□□□□ -0.5
CTSD-208ENST00000636843 ATP4BP51164 291 aa11.9□□□□□ -0.5
CTSD-208ENST00000636843 CLCN7P51798 805 aa11.9□□□□□ -0.5
CTSD-208ENST00000636843 KCNK10P57789 538 aa11.9□□□□□ -0.5
CTSD-208ENST00000636843 IRX1P78414 480 aaPredicted RBP11.9□□□□□ -0.5
CTSD-208ENST00000636843 ART3Q13508 389 aa11.9□□□□□ -0.5
CTSD-208ENST00000636843 SQLEQ14534 574 aa11.9□□□□□ -0.5
CTSD-208ENST00000636843 TSNQ15631 228 aaKnown RBP11.9□□□□□ -0.5
CTSD-208ENST00000636843 NDUFA9Q16795 377 aa11.9□□□□□ -0.5
CTSD-208ENST00000636843 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.9□□□□□ -0.5
CTSD-208ENST00000636843 HKDC1Q2TB90 917 aa11.9□□□□□ -0.5
CTSD-208ENST00000636843 TTLL9Q3SXZ7 439 aa11.9□□□□□ -0.5
CTSD-208ENST00000636843 FAAH2Q6GMR7 532 aa11.9□□□□□ -0.5
CTSD-208ENST00000636843 GFRALQ6UXV0 394 aa11.9□□□□□ -0.5
CTSD-208ENST00000636843 ARHGEF39Q8N4T4 335 aa11.9□□□□□ -0.5
CTSD-208ENST00000636843 SUN3Q8TAQ9 357 aa11.9□□□□□ -0.5
CTSD-208ENST00000636843 FAM136AQ96C01 138 aa11.9□□□□□ -0.5
CTSD-208ENST00000636843 LINGO1Q96FE5 620 aa11.9□□□□□ -0.5
CTSD-208ENST00000636843 PKP4Q99569 1192 aa11.9□□□□□ -0.5
CTSD-208ENST00000636843 ABI3Q9P2A4 366 aa11.9□□□□□ -0.5
CTSD-208ENST00000636843 GALPQ9UBC7 116 aa11.9□□□□□ -0.5
CTSD-208ENST00000636843 SLC7A8Q9UHI5 535 aa11.9□□□□□ -0.5
CTSD-208ENST00000636843 PRPF19Q9UMS4 504 aaKnown RBP11.9□□□□□ -0.5
CTSD-208ENST00000636843 LRBAP50851 2863 aa11.89□□□□□ -0.51
CTSD-208ENST00000636843 A0A0A6YYC8 382 aaPredicted RBP11.89□□□□□ -0.51
CTSD-208ENST00000636843 ARHGAP10A1A4S6 786 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms