RNA–Protein interactions for RNA: ENST00000636212.1

CLN6-213, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-213ENST00000636212 HIVEP3Q5T1R4 2406 aa17.68■□□□□ 0.42
CLN6-213ENST00000636212 NPIPA5E9PKD4 350 aa17.68■□□□□ 0.42
CLN6-213ENST00000636212 KIF2AO00139 706 aaPredicted RBP17.68■□□□□ 0.42
CLN6-213ENST00000636212 DYRK3O43781 588 aa17.68■□□□□ 0.42
CLN6-213ENST00000636212 SH3BGRLO75368 114 aa17.68■□□□□ 0.42
CLN6-213ENST00000636212 ITGA10O75578 1167 aa17.68■□□□□ 0.42
CLN6-213ENST00000636212 ACSL3O95573 720 aa17.68■□□□□ 0.42
CLN6-213ENST00000636212 ESRRAP11474 423 aaPredicted RBP17.68■□□□□ 0.42
CLN6-213ENST00000636212 COX7A2P14406 83 aa17.68■□□□□ 0.42
CLN6-213ENST00000636212 ZNF24P17028 368 aa17.68■□□□□ 0.42
CLN6-213ENST00000636212 HIST1H1TP22492 207 aaPredicted RBP17.68■□□□□ 0.42
CLN6-213ENST00000636212 TLX1P31314 330 aaPredicted RBP17.68■□□□□ 0.42
CLN6-213ENST00000636212 ARL1P40616 181 aaPredicted RBP17.68■□□□□ 0.42
CLN6-213ENST00000636212 PIK3CBP42338 1070 aa17.68■□□□□ 0.42
CLN6-213ENST00000636212 HNRNPFP52597 415 aaKnown RBP17.68■□□□□ 0.42
CLN6-213ENST00000636212 ZNF468Q5VIY5 522 aaPredicted RBP17.68■□□□□ 0.42
CLN6-213ENST00000636212 OR4C11Q6IEV9 310 aa17.68■□□□□ 0.42
CLN6-213ENST00000636212 METTL2BQ6P1Q9 378 aaKnown RBP17.68■□□□□ 0.42
CLN6-213ENST00000636212 CYP4Z2PQ8N1L4 340 aa17.68■□□□□ 0.42
CLN6-213ENST00000636212 ARMC10Q8N2F6 343 aa17.68■□□□□ 0.42
CLN6-213ENST00000636212 POGLUT1Q8NBL1 392 aa17.68■□□□□ 0.42
CLN6-213ENST00000636212 MORN4Q8NDC4 146 aa17.68■□□□□ 0.42
CLN6-213ENST00000636212 ATP6V1E2Q96A05 226 aa17.68■□□□□ 0.42
CLN6-213ENST00000636212 FRMD6Q96NE9 622 aa17.68■□□□□ 0.42
CLN6-213ENST00000636212 CSF3RQ99062 836 aa17.68■□□□□ 0.42
CLN6-213ENST00000636212 SH3BGRL2Q9UJC5 107 aa17.68■□□□□ 0.42
CLN6-213ENST00000636212 TMCO1Q9UM00 188 aa17.68■□□□□ 0.42
CLN6-213ENST00000636212 NPIPA1Q9UND3 350 aa17.68■□□□□ 0.42
CLN6-213ENST00000636212 ERVK-11Q9UQG0 969 aa17.68■□□□□ 0.42
CLN6-213ENST00000636212 YARS2Q9Y2Z4 477 aaKnown RBP17.68■□□□□ 0.42
CLN6-213ENST00000636212 ICE1Q9Y2F5 2266 aa17.67■□□□□ 0.42
CLN6-213ENST00000636212 SAP18O00422 153 aaKnown RBP17.67■□□□□ 0.42
CLN6-213ENST00000636212 RTCAO00442 366 aaKnown RBP17.67■□□□□ 0.42
CLN6-213ENST00000636212 UGDHO60701 494 aa17.67■□□□□ 0.42
CLN6-213ENST00000636212 SLC19A2O60779 497 aa17.67■□□□□ 0.42
CLN6-213ENST00000636212 KRT38O76015 456 aa17.67■□□□□ 0.42
CLN6-213ENST00000636212 RBP1P09455 135 aa17.67■□□□□ 0.42
CLN6-213ENST00000636212 MTHFD2P13995 350 aa17.67■□□□□ 0.42
CLN6-213ENST00000636212 COL8A1P27658 744 aa17.67■□□□□ 0.42
CLN6-213ENST00000636212 PPP2R1BP30154 601 aa17.67■□□□□ 0.42
CLN6-213ENST00000636212 CA7P43166 264 aa17.67■□□□□ 0.42
CLN6-213ENST00000636212 BIKQ13323 160 aa17.67■□□□□ 0.42
CLN6-213ENST00000636212 PCBP2Q15366 365 aaKnown RBP eCLIP17.67■□□□□ 0.42
CLN6-213ENST00000636212 DEPDC1Q5TB30 811 aa17.67■□□□□ 0.42
CLN6-213ENST00000636212 HSDL2Q6YN16 418 aa17.67■□□□□ 0.42
CLN6-213ENST00000636212 SLC34A3Q8N130 599 aa17.67■□□□□ 0.42
CLN6-213ENST00000636212 GHDCQ8N2G8 530 aa17.67■□□□□ 0.42
CLN6-213ENST00000636212 HUS1BQ8NHY5 278 aa17.67■□□□□ 0.42
CLN6-213ENST00000636212 SCYL1Q96KG9 808 aa17.67■□□□□ 0.42
CLN6-213ENST00000636212 MAPKAP1Q9BPZ7 522 aa17.67■□□□□ 0.42
CLN6-213ENST00000636212 TSPAN10Q9H1Z9 355 aaPredicted RBP17.67■□□□□ 0.42
CLN6-213ENST00000636212 CDC42EP4Q9H3Q1 356 aaKnown RBP17.67■□□□□ 0.42
CLN6-213ENST00000636212 IPPKQ9H8X2 491 aa17.67■□□□□ 0.42
CLN6-213ENST00000636212 TIMMDC1Q9NPL8 285 aa17.67■□□□□ 0.42
CLN6-213ENST00000636212 KCMF1Q9P0J7 381 aa17.67■□□□□ 0.42
CLN6-213ENST00000636212 COPS7AQ9UBW8 275 aa17.67■□□□□ 0.42
CLN6-213ENST00000636212 VTI1BQ9UEU0 232 aa17.67■□□□□ 0.42
CLN6-213ENST00000636212 PHF11Q9UIL8 331 aa17.67■□□□□ 0.42
CLN6-213ENST00000636212 TGFBR3LH3BV60 316 aa17.66■□□□□ 0.42
CLN6-213ENST00000636212 ASNA1O43681 348 aa17.66■□□□□ 0.42
CLN6-213ENST00000636212 ALDOAP04075 364 aaKnown RBP17.66■□□□□ 0.42
CLN6-213ENST00000636212 ABOP16442 354 aa17.66■□□□□ 0.42
CLN6-213ENST00000636212 PTX3P26022 381 aaPredicted RBP17.66■□□□□ 0.42
CLN6-213ENST00000636212 CNTFP26441 200 aa17.66■□□□□ 0.42
CLN6-213ENST00000636212 DCTP40126 519 aa17.66■□□□□ 0.42
CLN6-213ENST00000636212 ARFIP1P53367 373 aa17.66■□□□□ 0.42
CLN6-213ENST00000636212 SLAMF1Q13291 335 aa17.66■□□□□ 0.42
CLN6-213ENST00000636212 GTF2H2Q13888 395 aa17.66■□□□□ 0.42
CLN6-213ENST00000636212 TSNAXIP1Q2TAA8 658 aa17.66■□□□□ 0.42
CLN6-213ENST00000636212 GTF2H2CQ6P1K8 395 aa17.66■□□□□ 0.42
CLN6-213ENST00000636212 RPTNQ6XPR3 784 aa17.66■□□□□ 0.42
CLN6-213ENST00000636212 ZNF793Q6ZN11 406 aa17.66■□□□□ 0.42
CLN6-213ENST00000636212 UBE3DQ7Z6J8 389 aa17.66■□□□□ 0.42
CLN6-213ENST00000636212 GPALPP1Q8IXQ4 340 aa17.66■□□□□ 0.42
CLN6-213ENST00000636212 SLC44A1Q8WWI5 657 aa17.66■□□□□ 0.42
CLN6-213ENST00000636212 ASB15Q8WXK1 588 aa17.66■□□□□ 0.42
CLN6-213ENST00000636212 TRIM44Q96DX7 344 aaPredicted RBP17.66■□□□□ 0.42
CLN6-213ENST00000636212 MTERF1Q99551 399 aaKnown RBP17.66■□□□□ 0.42
CLN6-213ENST00000636212 FUT8Q9BYC5 575 aa17.66■□□□□ 0.42
CLN6-213ENST00000636212 OR8D2Q9GZM6 311 aa17.66■□□□□ 0.42
CLN6-213ENST00000636212 OR51B5Q9H339 312 aa17.66■□□□□ 0.42
CLN6-213ENST00000636212 DMGDHQ9UI17 866 aaKnown RBP17.66■□□□□ 0.42
CLN6-213ENST00000636212 TSC22D4Q9Y3Q8 395 aa17.66■□□□□ 0.42
CLN6-213ENST00000636212 SPTBN1Q01082 2364 aaKnown RBP17.65■□□□□ 0.42
CLN6-213ENST00000636212 HMX2A2RU54 273 aa17.65■□□□□ 0.42
CLN6-213ENST00000636212 A8MVJ9 347 aa17.65■□□□□ 0.42
CLN6-213ENST00000636212 C17orf105B2RV13 164 aa17.65■□□□□ 0.42
CLN6-213ENST00000636212 POC1B-GALNT4F8VUJ3 575 aa17.65■□□□□ 0.42
CLN6-213ENST00000636212 KLK8O60259 260 aa17.65■□□□□ 0.42
CLN6-213ENST00000636212 LDB3O75112 727 aa17.65■□□□□ 0.42
CLN6-213ENST00000636212 SMIM24O75264 130 aa17.65■□□□□ 0.42
CLN6-213ENST00000636212 SCELO95171 688 aa17.65■□□□□ 0.42
CLN6-213ENST00000636212 BUD31P41223 144 aaPredicted RBP17.65■□□□□ 0.42
CLN6-213ENST00000636212 MEOX1P50221 254 aa17.65■□□□□ 0.42
CLN6-213ENST00000636212 ZNF787Q6DD87 383 aa17.65■□□□□ 0.42
CLN6-213ENST00000636212 GOLGA7Q7Z5G4 137 aa17.65■□□□□ 0.42
CLN6-213ENST00000636212 SPPL2CQ8IUH8 684 aa17.65■□□□□ 0.42
CLN6-213ENST00000636212 EID3Q8N140 333 aa17.65■□□□□ 0.42
CLN6-213ENST00000636212 OR5L2Q8NGL0 311 aa17.65■□□□□ 0.42
CLN6-213ENST00000636212 DGAT2Q96PD7 388 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms