RNA–Protein interactions for RNA: ENST00000629380.2

SYNGAP1-208, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SYNGAP1, Length 9,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-208ENST00000629380 PHOSPHO1Q8TCT1 267 aa12.72□□□□□ -0.37
SYNGAP1-208ENST00000629380 CGREF1Q99674 301 aa12.72□□□□□ -0.37
SYNGAP1-208ENST00000629380 PELOQ9BRX2 385 aaKnown RBP12.72□□□□□ -0.37
SYNGAP1-208ENST00000629380 ATG5Q9H1Y0 275 aa12.72□□□□□ -0.37
SYNGAP1-208ENST00000629380 HIPK2Q9H2X6 1198 aa12.72□□□□□ -0.37
SYNGAP1-208ENST00000629380 TOR1BO14657 336 aa12.72□□□□□ -0.37
SYNGAP1-208ENST00000629380 CYCSP99999 105 aaKnown RBP12.72□□□□□ -0.37
SYNGAP1-208ENST00000629380 DPY19L3Q6ZPD9 716 aa12.72□□□□□ -0.37
SYNGAP1-208ENST00000629380 NFKBIDQ8NI38 313 aa12.72□□□□□ -0.37
SYNGAP1-208ENST00000629380 NEIL3Q8TAT5 605 aa12.72□□□□□ -0.37
SYNGAP1-208ENST00000629380 FZD10Q9ULW2 581 aa12.72□□□□□ -0.37
SYNGAP1-208ENST00000629380 MGAT4BQ9UQ53 548 aa12.72□□□□□ -0.37
SYNGAP1-208ENST00000629380 ERVK-19Q9WJR5 959 aa12.72□□□□□ -0.37
SYNGAP1-208ENST00000629380 CIB4A0PJX0 185 aa12.72□□□□□ -0.37
SYNGAP1-208ENST00000629380 TSTD3H0UI37 97 aa12.72□□□□□ -0.37
SYNGAP1-208ENST00000629380 ATP6V1G1O75348 118 aa12.72□□□□□ -0.37
SYNGAP1-208ENST00000629380 ARRB1P49407 418 aaPredicted RBP12.72□□□□□ -0.37
SYNGAP1-208ENST00000629380 CCNHP51946 323 aaPredicted RBP12.72□□□□□ -0.37
SYNGAP1-208ENST00000629380 PIGGQ5H8A4 983 aa12.72□□□□□ -0.37
SYNGAP1-208ENST00000629380 SSX3Q99909 188 aa12.72□□□□□ -0.37
SYNGAP1-208ENST00000629380 MMP27Q9H306 513 aa12.72□□□□□ -0.37
SYNGAP1-208ENST00000629380 PCTPQ9UKL6 214 aa12.72□□□□□ -0.37
SYNGAP1-208ENST00000629380 FCF1Q9Y324 198 aaKnown RBP12.72□□□□□ -0.37
SYNGAP1-208ENST00000629380 MAFBQ9Y5Q3 323 aaPredicted RBP12.72□□□□□ -0.37
SYNGAP1-208ENST00000629380 SLX4Q8IY92 1834 aa12.72□□□□□ -0.37
SYNGAP1-208ENST00000629380 A0A1W2PPM1 405 aa12.72□□□□□ -0.37
SYNGAP1-208ENST00000629380 XPNPEP2O43895 674 aa12.72□□□□□ -0.37
SYNGAP1-208ENST00000629380 KLK1P06870 262 aa12.72□□□□□ -0.37
SYNGAP1-208ENST00000629380 ATP1B2P14415 290 aaPredicted RBP12.72□□□□□ -0.37
SYNGAP1-208ENST00000629380 FPR1P21462 350 aa12.72□□□□□ -0.37
SYNGAP1-208ENST00000629380 JAM2P57087 298 aa12.72□□□□□ -0.37
SYNGAP1-208ENST00000629380 HNRNPDQ14103 355 aaKnown RBP12.72□□□□□ -0.37
SYNGAP1-208ENST00000629380 VARS2Q5ST30 1063 aaKnown RBP12.72□□□□□ -0.37
SYNGAP1-208ENST00000629380 C12orf45Q8N5I9 185 aaPredicted RBP12.72□□□□□ -0.37
SYNGAP1-208ENST00000629380 SMG8Q8ND04 991 aaKnown RBP12.72□□□□□ -0.37
SYNGAP1-208ENST00000629380 WDR77Q9BQA1 342 aaPredicted RBP12.72□□□□□ -0.37
SYNGAP1-208ENST00000629380 RLIMQ9NVW2 624 aa12.72□□□□□ -0.37
SYNGAP1-208ENST00000629380 ATRNL1Q5VV63 1379 aa12.72□□□□□ -0.37
SYNGAP1-208ENST00000629380 SLC38A8A6NNN8 435 aa12.72□□□□□ -0.37
SYNGAP1-208ENST00000629380 M0R2N6 131 aa12.72□□□□□ -0.37
SYNGAP1-208ENST00000629380 DNM1LO00429 736 aa12.72□□□□□ -0.37
SYNGAP1-208ENST00000629380 BCAS1O75363 584 aaPredicted RBP12.72□□□□□ -0.37
SYNGAP1-208ENST00000629380 SLC22A16Q86VW1 577 aa12.72□□□□□ -0.37
SYNGAP1-208ENST00000629380 CMTM1Q8IZ96 169 aa12.72□□□□□ -0.37
SYNGAP1-208ENST00000629380 PYURFQ96I23 114 aa12.72□□□□□ -0.37
SYNGAP1-208ENST00000629380 HNRNPABQ99729 332 aaKnown RBP12.72□□□□□ -0.37
SYNGAP1-208ENST00000629380 ZNF763Q0D2J5 394 aa12.71□□□□□ -0.37
SYNGAP1-208ENST00000629380 NFATC2Q13469 925 aa12.71□□□□□ -0.37
SYNGAP1-208ENST00000629380 CCINQ13939 588 aa12.71□□□□□ -0.37
SYNGAP1-208ENST00000629380 SMIM15Q7Z3B0 74 aa12.71□□□□□ -0.37
SYNGAP1-208ENST00000629380 BBS10Q8TAM1 723 aa12.71□□□□□ -0.37
SYNGAP1-208ENST00000629380 TGM7Q96PF1 710 aa12.71□□□□□ -0.37
SYNGAP1-208ENST00000629380 CPQQ9Y646 472 aa12.71□□□□□ -0.37
SYNGAP1-208ENST00000629380 ZNF440Q8IYI8 595 aa12.71□□□□□ -0.37
SYNGAP1-208ENST00000629380 ZNF283Q8N7M2 679 aa12.71□□□□□ -0.37
SYNGAP1-208ENST00000629380 NIPA2Q8N8Q9 360 aa12.71□□□□□ -0.37
SYNGAP1-208ENST00000629380 IL17RCQ8NAC3 791 aa12.71□□□□□ -0.37
SYNGAP1-208ENST00000629380 GNPDA2Q8TDQ7 276 aa12.71□□□□□ -0.37
SYNGAP1-208ENST00000629380 CPT1BQ92523 772 aa12.71□□□□□ -0.37
SYNGAP1-208ENST00000629380 UPK3BL1B0FP48 263 aa12.71□□□□□ -0.37
SYNGAP1-208ENST00000629380 UPK3BL2E5RIL1 263 aa12.71□□□□□ -0.37
SYNGAP1-208ENST00000629380 JUNP05412 331 aaKnown RBP12.71□□□□□ -0.37
SYNGAP1-208ENST00000629380 UQCRC2P22695 453 aa12.71□□□□□ -0.37
SYNGAP1-208ENST00000629380 HNRNPA0Q13151 305 aaKnown RBP12.71□□□□□ -0.37
SYNGAP1-208ENST00000629380 ZNF267Q14586 743 aaPredicted RBP12.71□□□□□ -0.37
SYNGAP1-208ENST00000629380 CARD16Q5EG05 197 aa12.71□□□□□ -0.37
SYNGAP1-208ENST00000629380 SPRYD4Q8WW59 207 aaPredicted RBP12.71□□□□□ -0.37
SYNGAP1-208ENST00000629380 UBE2J1Q9Y385 318 aaPredicted RBP12.71□□□□□ -0.37
SYNGAP1-208ENST00000629380 FAAHO00519 579 aa12.71□□□□□ -0.37
SYNGAP1-208ENST00000629380 C1orf94Q6P1W5 598 aa12.71□□□□□ -0.37
SYNGAP1-208ENST00000629380 BEST3Q8N1M1 668 aa12.71□□□□□ -0.37
SYNGAP1-208ENST00000629380 KREMEN2Q8NCW0 462 aa12.71□□□□□ -0.37
SYNGAP1-208ENST00000629380 OR56B2PQ8NGI1 322 aa12.71□□□□□ -0.37
SYNGAP1-208ENST00000629380 RPLP0P6Q8NHW5 317 aa12.71□□□□□ -0.37
SYNGAP1-208ENST00000629380 ADAMTSL3P82987 1691 aa12.71□□□□□ -0.37
SYNGAP1-208ENST00000629380 TMBIM1Q969X1 311 aa12.71□□□□□ -0.37
SYNGAP1-208ENST00000629380 SRA1Q9HD15 236 aaKnown RBP12.71□□□□□ -0.37
SYNGAP1-208ENST00000629380 SMIM28A0A1B0GU29 152 aa12.71□□□□□ -0.38
SYNGAP1-208ENST00000629380 ZNF850A8MQ14 1090 aa12.71□□□□□ -0.38
SYNGAP1-208ENST00000629380 CDRT1O95170 752 aa12.71□□□□□ -0.38
SYNGAP1-208ENST00000629380 SNHG28P0DPA3 235 aa12.71□□□□□ -0.38
SYNGAP1-208ENST00000629380 ITGB5P18084 799 aa12.71□□□□□ -0.38
SYNGAP1-208ENST00000629380 SH3D19Q5HYK7 790 aa12.71□□□□□ -0.38
SYNGAP1-208ENST00000629380 AKR1C8PQ5T2L2 129 aa12.71□□□□□ -0.38
SYNGAP1-208ENST00000629380 LILRB2Q8N423 598 aa12.71□□□□□ -0.38
SYNGAP1-208ENST00000629380 OR9A4Q8NGU2 314 aa12.71□□□□□ -0.38
SYNGAP1-208ENST00000629380 DNAJC19Q96DA6 116 aa12.71□□□□□ -0.38
SYNGAP1-208ENST00000629380 FAM83CQ9BQN1 747 aa12.71□□□□□ -0.38
SYNGAP1-208ENST00000629380 POLDIP3Q9BY77 421 aaKnown RBP12.71□□□□□ -0.38
SYNGAP1-208ENST00000629380 HCN4Q9Y3Q4 1203 aa12.71□□□□□ -0.38
SYNGAP1-208ENST00000629380 PDLIM1O00151 329 aa12.71□□□□□ -0.38
SYNGAP1-208ENST00000629380 THEGLP0DJG4 465 aa12.71□□□□□ -0.38
SYNGAP1-208ENST00000629380 CDKN2CP42773 168 aa12.71□□□□□ -0.38
SYNGAP1-208ENST00000629380 NTRK2Q16620 822 aa12.71□□□□□ -0.38
SYNGAP1-208ENST00000629380 ARHGAP11AQ6P4F7 1023 aa12.71□□□□□ -0.38
SYNGAP1-208ENST00000629380 PIAS4Q8N2W9 510 aaPredicted RBP12.71□□□□□ -0.38
SYNGAP1-208ENST00000629380 CASTOR1Q8WTX7 329 aa12.71□□□□□ -0.38
SYNGAP1-208ENST00000629380 HSD17B14Q9BPX1 270 aa12.71□□□□□ -0.38
SYNGAP1-208ENST00000629380 ACP6Q9NPH0 428 aa12.71□□□□□ -0.38
SYNGAP1-208ENST00000629380 SLC7A8Q9UHI5 535 aa12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms