RNA–Protein interactions for RNA: ENST00000628509.1

FOXCUT-201, FOXC1 upstream transcript, humanhuman

TSL 3 BASIC

Gene FOXCUT, Length 333 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXCUT-201ENST00000628509 LRIF1Q5T3J3 769 aa9.61□□□□□ -0.87
FOXCUT-201ENST00000628509 TMEM164Q5U3C3 297 aa9.61□□□□□ -0.87
FOXCUT-201ENST00000628509 DMRTA1Q5VZB9 504 aa9.61□□□□□ -0.87
FOXCUT-201ENST00000628509 OR4F3Q6IEY1 312 aa9.61□□□□□ -0.87
FOXCUT-201ENST00000628509 SLC48A1Q6P1K1 146 aa9.61□□□□□ -0.87
FOXCUT-201ENST00000628509 ERICH5Q6P6B1 374 aa9.61□□□□□ -0.87
FOXCUT-201ENST00000628509 ARHGAP22Q7Z5H3 698 aa9.61□□□□□ -0.87
FOXCUT-201ENST00000628509 NET1Q7Z628 596 aaPredicted RBP9.61□□□□□ -0.87
FOXCUT-201ENST00000628509 TICAM1Q8IUC6 712 aa9.61□□□□□ -0.87
FOXCUT-201ENST00000628509 SLC30A8Q8IWU4 369 aa9.61□□□□□ -0.87
FOXCUT-201ENST00000628509 ZNF595Q8IYB9 648 aa9.61□□□□□ -0.87
FOXCUT-201ENST00000628509 OR4N4Q8N0Y3 316 aa9.61□□□□□ -0.87
FOXCUT-201ENST00000628509 FBXW8Q8N3Y1 598 aa9.61□□□□□ -0.87
FOXCUT-201ENST00000628509 KRTCAP2Q8N6L1 136 aa9.61□□□□□ -0.87
FOXCUT-201ENST00000628509 FAM47BQ8NA70 645 aa9.61□□□□□ -0.87
FOXCUT-201ENST00000628509 OR4K14Q8NGD5 310 aa9.61□□□□□ -0.87
FOXCUT-201ENST00000628509 OR4A15Q8NGL6 344 aa9.61□□□□□ -0.87
FOXCUT-201ENST00000628509 GFM2Q969S9 779 aaKnown RBP9.61□□□□□ -0.87
FOXCUT-201ENST00000628509 VPS33AQ96AX1 596 aa9.61□□□□□ -0.87
FOXCUT-201ENST00000628509 TEFMQ96QE5 360 aaKnown RBP9.61□□□□□ -0.87
FOXCUT-201ENST00000628509 OR1F2PQ96R84 312 aa9.61□□□□□ -0.87
FOXCUT-201ENST00000628509 CDRT15Q96T59 188 aa9.61□□□□□ -0.87
FOXCUT-201ENST00000628509 CGREF1Q99674 301 aa9.61□□□□□ -0.87
FOXCUT-201ENST00000628509 NRTNQ99748 197 aa9.61□□□□□ -0.87
FOXCUT-201ENST00000628509 DPH2Q9BQC3 489 aaPredicted RBP9.61□□□□□ -0.87
FOXCUT-201ENST00000628509 THUMPD3Q9BV44 507 aaKnown RBP9.61□□□□□ -0.87
FOXCUT-201ENST00000628509 ACTL8Q9H568 366 aa9.61□□□□□ -0.87
FOXCUT-201ENST00000628509 RPF2Q9H7B2 306 aaKnown RBP9.61□□□□□ -0.87
FOXCUT-201ENST00000628509 SLC35C2Q9NQQ7 365 aa9.61□□□□□ -0.87
FOXCUT-201ENST00000628509 CUTCQ9NTM9 273 aa9.61□□□□□ -0.87
FOXCUT-201ENST00000628509 TAS2R9Q9NYW1 312 aa9.61□□□□□ -0.87
FOXCUT-201ENST00000628509 NDOR1Q9UHB4 597 aa9.61□□□□□ -0.87
FOXCUT-201ENST00000628509 FBXW2Q9UKT8 454 aa9.61□□□□□ -0.87
FOXCUT-201ENST00000628509 NAALAD2Q9Y3Q0 740 aa9.61□□□□□ -0.87
FOXCUT-201ENST00000628509 CABIN1Q9Y6J0 2220 aa9.6□□□□□ -0.87
FOXCUT-201ENST00000628509 KNL1Q8NG31 2342 aa9.6□□□□□ -0.87
FOXCUT-201ENST00000628509 LY6G6EA0A0G2JKS1 128 aa9.6□□□□□ -0.87
FOXCUT-201ENST00000628509 IGHV5-10-1A0A0J9YXX1 117 aa9.6□□□□□ -0.87
FOXCUT-201ENST00000628509 A0A1B0GX78 115 aa9.6□□□□□ -0.87
FOXCUT-201ENST00000628509 RTCAO00442 366 aaKnown RBP9.6□□□□□ -0.87
FOXCUT-201ENST00000628509 FBP2O00757 339 aa9.6□□□□□ -0.87
FOXCUT-201ENST00000628509 DSCR3O14972 297 aa9.6□□□□□ -0.87
FOXCUT-201ENST00000628509 KIF1CO43896 1103 aaKnown RBP9.6□□□□□ -0.87
FOXCUT-201ENST00000628509 BCAS2O75934 225 aaPredicted RBP9.6□□□□□ -0.87
FOXCUT-201ENST00000628509 GBAP04062 536 aa9.6□□□□□ -0.87
FOXCUT-201ENST00000628509 KLK3P07288 261 aaPredicted RBP9.6□□□□□ -0.87
FOXCUT-201ENST00000628509 CYC1P08574 325 aa9.6□□□□□ -0.87
FOXCUT-201ENST00000628509 AGXTP21549 392 aa9.6□□□□□ -0.87
FOXCUT-201ENST00000628509 UQCRC2P22695 453 aa9.6□□□□□ -0.87
FOXCUT-201ENST00000628509 CERS1P27544 350 aa9.6□□□□□ -0.87
FOXCUT-201ENST00000628509 IL12AP29459 219 aa9.6□□□□□ -0.87
FOXCUT-201ENST00000628509 CSF2RBP32927 897 aa9.6□□□□□ -0.87
FOXCUT-201ENST00000628509 CHI3L1P36222 383 aaPredicted RBP9.6□□□□□ -0.87
FOXCUT-201ENST00000628509 CPOXP36551 454 aa9.6□□□□□ -0.87
FOXCUT-201ENST00000628509 DGKQP52824 942 aa9.6□□□□□ -0.87
FOXCUT-201ENST00000628509 LIMK1P53667 647 aa9.6□□□□□ -0.87
FOXCUT-201ENST00000628509 LIM2P55344 173 aa9.6□□□□□ -0.87
FOXCUT-201ENST00000628509 PPP1CAP62136 330 aa9.6□□□□□ -0.87
FOXCUT-201ENST00000628509 TCF15Q12870 199 aa9.6□□□□□ -0.87
FOXCUT-201ENST00000628509 TRAP1Q12931 704 aaKnown RBP9.6□□□□□ -0.87
FOXCUT-201ENST00000628509 FADDQ13158 208 aa9.6□□□□□ -0.87
FOXCUT-201ENST00000628509 SF3A2Q15428 464 aaKnown RBP9.6□□□□□ -0.87
FOXCUT-201ENST00000628509 SPDYE7PQ495Y7 208 aa9.6□□□□□ -0.87
FOXCUT-201ENST00000628509 MTX3Q5HYI7 312 aa9.6□□□□□ -0.87
FOXCUT-201ENST00000628509 C1orf146Q5VVC0 180 aa9.6□□□□□ -0.87
FOXCUT-201ENST00000628509 TCEAL6Q6IPX3 200 aa9.6□□□□□ -0.87
FOXCUT-201ENST00000628509 ZNF621Q6ZSS3 439 aa9.6□□□□□ -0.87
FOXCUT-201ENST00000628509 UBE3DQ7Z6J8 389 aa9.6□□□□□ -0.87
FOXCUT-201ENST00000628509 PROSER1Q86XN7 944 aa9.6□□□□□ -0.87
FOXCUT-201ENST00000628509 TMEM126BQ8IUX1 230 aa9.6□□□□□ -0.87
FOXCUT-201ENST00000628509 ULK2Q8IYT8 1036 aa9.6□□□□□ -0.87
FOXCUT-201ENST00000628509 LRRC25Q8N386 305 aaPredicted RBP9.6□□□□□ -0.87
FOXCUT-201ENST00000628509 OR7A2PQ8NGA2 310 aa9.6□□□□□ -0.87
FOXCUT-201ENST00000628509 OR2I1PQ8NGU4 316 aa9.6□□□□□ -0.87
FOXCUT-201ENST00000628509 GOT1L1Q8NHS2 421 aaPredicted RBP9.6□□□□□ -0.87
FOXCUT-201ENST00000628509 GTF2H4Q92759 462 aa9.6□□□□□ -0.87
FOXCUT-201ENST00000628509 TCEAL3Q969E4 200 aa9.6□□□□□ -0.87
FOXCUT-201ENST00000628509 ASB9Q96DX5 294 aa9.6□□□□□ -0.87
FOXCUT-201ENST00000628509 MMABQ96EY8 250 aaPredicted RBP9.6□□□□□ -0.87
FOXCUT-201ENST00000628509 EGLN2Q96KS0 407 aa9.6□□□□□ -0.87
FOXCUT-201ENST00000628509 TEX37Q96LM6 180 aa9.6□□□□□ -0.87
FOXCUT-201ENST00000628509 CCDC74BQ96LY2 380 aa9.6□□□□□ -0.87
FOXCUT-201ENST00000628509 ZNF578Q96N58 590 aaPredicted RBP9.6□□□□□ -0.87
FOXCUT-201ENST00000628509 ANKRD27Q96NW4 1050 aa9.6□□□□□ -0.87
FOXCUT-201ENST00000628509 DEPDC7Q96QD5 511 aa9.6□□□□□ -0.87
FOXCUT-201ENST00000628509 NUDT22Q9BRQ3 303 aa9.6□□□□□ -0.87
FOXCUT-201ENST00000628509 ZNF717Q9BY31 904 aaPredicted RBP9.6□□□□□ -0.87
FOXCUT-201ENST00000628509 CADM1Q9BY67 442 aaKnown RBP9.6□□□□□ -0.87
FOXCUT-201ENST00000628509 KLHL31Q9H511 634 aa9.6□□□□□ -0.87
FOXCUT-201ENST00000628509 FAM60AQ9NP50 221 aa9.6□□□□□ -0.87
FOXCUT-201ENST00000628509 SUCOQ9UBS9 1254 aaKnown RBP9.6□□□□□ -0.87
FOXCUT-201ENST00000628509 ASB4Q9Y574 426 aa9.6□□□□□ -0.87
FOXCUT-201ENST00000628509 PCDHB3Q9Y5E6 796 aa9.6□□□□□ -0.87
FOXCUT-201ENST00000628509 U3KQA8 63 aa9.6□□□□□ -0.87
FOXCUT-201ENST00000628509 SDK1Q7Z5N4 2213 aa9.6□□□□□ -0.87
FOXCUT-201ENST00000628509 SNRNP200O75643 2136 aaKnown RBP9.59□□□□□ -0.87
FOXCUT-201ENST00000628509 A0A1W2PQM1 296 aa9.59□□□□□ -0.87
FOXCUT-201ENST00000628509 CDX4O14627 284 aaPredicted RBP9.59□□□□□ -0.87
FOXCUT-201ENST00000628509 PCDH17O14917 1159 aa9.59□□□□□ -0.87
FOXCUT-201ENST00000628509 POLR1CO15160 346 aaPredicted RBP9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms