RNA–Protein interactions for RNA: ENST00000622633.4

LITAF-221, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-221ENST00000622633 GPRC6AQ5T6X5 926 aa11.93□□□□□ -0.5
LITAF-221ENST00000622633 ANKRD46Q86W74 232 aa11.93□□□□□ -0.5
LITAF-221ENST00000622633 OR6S1Q8NH40 331 aa11.93□□□□□ -0.5
LITAF-221ENST00000622633 ZSWIM3Q96MP5 696 aa11.93□□□□□ -0.5
LITAF-221ENST00000622633 FRMD6Q96NE9 622 aa11.93□□□□□ -0.5
LITAF-221ENST00000622633 RBM4BQ9BQ04 359 aaKnown RBP11.93□□□□□ -0.5
LITAF-221ENST00000622633 INPP5KQ9BT40 448 aa11.93□□□□□ -0.5
LITAF-221ENST00000622633 RBM4Q9BWF3 364 aaKnown RBP11.93□□□□□ -0.5
LITAF-221ENST00000622633 ABCG8Q9H221 673 aa11.93□□□□□ -0.5
LITAF-221ENST00000622633 DCAF13Q9NV06 445 aaKnown RBP11.93□□□□□ -0.5
LITAF-221ENST00000622633 RDH8Q9NYR8 311 aa11.93□□□□□ -0.5
LITAF-221ENST00000622633 ACTR10Q9NZ32 417 aa11.93□□□□□ -0.5
LITAF-221ENST00000622633 ERVK-18Q9QC07 812 aa11.93□□□□□ -0.5
LITAF-221ENST00000622633 BAIAP2Q9UQB8 552 aa11.93□□□□□ -0.5
LITAF-221ENST00000622633 PEX16Q9Y5Y5 336 aa11.93□□□□□ -0.5
LITAF-221ENST00000622633 LYVE1Q9Y5Y7 322 aa11.93□□□□□ -0.5
LITAF-221ENST00000622633 LOC100130705A0A1B0GUX0 176 aa11.93□□□□□ -0.5
LITAF-221ENST00000622633 TRABD2BA6NFA1 517 aa11.93□□□□□ -0.5
LITAF-221ENST00000622633 DNASE2O00115 360 aaPredicted RBP11.93□□□□□ -0.5
LITAF-221ENST00000622633 XPNPEP2O43895 674 aa11.93□□□□□ -0.5
LITAF-221ENST00000622633 RFPL3O75679 317 aa11.93□□□□□ -0.5
LITAF-221ENST00000622633 HTR3BO95264 441 aa11.93□□□□□ -0.5
LITAF-221ENST00000622633 SERPINA1P01009 418 aa11.93□□□□□ -0.5
LITAF-221ENST00000622633 SLC10A3P09131 477 aa11.93□□□□□ -0.5
LITAF-221ENST00000622633 ACSM4P0C7M7 580 aa11.93□□□□□ -0.5
LITAF-221ENST00000622633 EPB42P16452 691 aa11.93□□□□□ -0.5
LITAF-221ENST00000622633 CD36P16671 472 aa11.93□□□□□ -0.5
LITAF-221ENST00000622633 BPIP17213 487 aa11.93□□□□□ -0.5
LITAF-221ENST00000622633 PTAFRP25105 342 aa11.93□□□□□ -0.5
LITAF-221ENST00000622633 HYAL2Q12891 473 aa11.93□□□□□ -0.5
LITAF-221ENST00000622633 GPNMBQ14956 572 aa11.93□□□□□ -0.5
LITAF-221ENST00000622633 USP39Q53GS9 565 aaKnown RBP11.93□□□□□ -0.5
LITAF-221ENST00000622633 LRRC8DQ7L1W4 858 aa11.93□□□□□ -0.5
LITAF-221ENST00000622633 GPR149Q86SP6 731 aa11.93□□□□□ -0.5
LITAF-221ENST00000622633 VWA5B2Q8N398 1253 aa11.93□□□□□ -0.5
LITAF-221ENST00000622633 SVOPLQ8N434 492 aa11.93□□□□□ -0.5
LITAF-221ENST00000622633 AMER2Q8N7J2 671 aa11.93□□□□□ -0.5
LITAF-221ENST00000622633 ITCHQ96J02 903 aa11.93□□□□□ -0.5
LITAF-221ENST00000622633 RDH12Q96NR8 316 aa11.93□□□□□ -0.5
LITAF-221ENST00000622633 REG4Q9BYZ8 158 aa11.93□□□□□ -0.5
LITAF-221ENST00000622633 C1orf109Q9NX04 203 aa11.93□□□□□ -0.5
LITAF-221ENST00000622633 RNF186Q9NXI6 227 aa11.93□□□□□ -0.5
LITAF-221ENST00000622633 USE1Q9NZ43 259 aa11.93□□□□□ -0.5
LITAF-221ENST00000622633 CRLS1Q9UJA2 301 aa11.93□□□□□ -0.5
LITAF-221ENST00000622633 DLGAP4Q9Y2H0 992 aa11.93□□□□□ -0.5
LITAF-221ENST00000622633 OR51B4Q9Y5P0 310 aa11.93□□□□□ -0.5
LITAF-221ENST00000622633 TTLL8A6PVC2 850 aa11.92□□□□□ -0.5
LITAF-221ENST00000622633 EFCAB7A8K855 629 aa11.92□□□□□ -0.5
LITAF-221ENST00000622633 SLC30A4O14863 429 aa11.92□□□□□ -0.5
LITAF-221ENST00000622633 PCDHGA12O60330 932 aa11.92□□□□□ -0.5
LITAF-221ENST00000622633 PLATP00750 562 aa11.92□□□□□ -0.5
LITAF-221ENST00000622633 RAF1P04049 648 aa11.92□□□□□ -0.5
LITAF-221ENST00000622633 EBLN1P0CF75 366 aa11.92□□□□□ -0.5
LITAF-221ENST00000622633 ACRV1P26436 265 aa11.92□□□□□ -0.5
LITAF-221ENST00000622633 TCTN1Q2MV58 587 aa11.92□□□□□ -0.5
LITAF-221ENST00000622633 GPR33Q49SQ1 333 aa11.92□□□□□ -0.5
LITAF-221ENST00000622633 HSD17B12Q53GQ0 312 aa11.92□□□□□ -0.5
LITAF-221ENST00000622633 PYHIN1Q6K0P9 492 aa11.92□□□□□ -0.5
LITAF-221ENST00000622633 C17orf107Q6ZR85 190 aa11.92□□□□□ -0.5
LITAF-221ENST00000622633 C12orf40Q86WS4 652 aa11.92□□□□□ -0.5
LITAF-221ENST00000622633 ADHFE1Q8IWW8 467 aa11.92□□□□□ -0.5
LITAF-221ENST00000622633 APCDD1Q8J025 514 aa11.92□□□□□ -0.5
LITAF-221ENST00000622633 EDARADDQ8WWZ3 215 aa11.92□□□□□ -0.5
LITAF-221ENST00000622633 ELP4Q96EB1 424 aa11.92□□□□□ -0.5
LITAF-221ENST00000622633 FAM120BQ96EK7 910 aaKnown RBP11.92□□□□□ -0.5
LITAF-221ENST00000622633 HYLS1Q96M11 299 aa11.92□□□□□ -0.5
LITAF-221ENST00000622633 TOX2Q96NM4 488 aa11.92□□□□□ -0.5
LITAF-221ENST00000622633 ACPTQ9BZG2 426 aa11.92□□□□□ -0.5
LITAF-221ENST00000622633 OSGEPL1Q9H4B0 414 aa11.92□□□□□ -0.5
LITAF-221ENST00000622633 ELAC1Q9H777 363 aaKnown RBP11.92□□□□□ -0.5
LITAF-221ENST00000622633 RNF121Q9H920 327 aa11.92□□□□□ -0.5
LITAF-221ENST00000622633 COPZ2Q9P299 210 aa11.92□□□□□ -0.5
LITAF-221ENST00000622633 MUTYHQ9UIF7 546 aa11.92□□□□□ -0.5
LITAF-221ENST00000622633 RPS6KA6Q9UK32 745 aa11.92□□□□□ -0.5
LITAF-221ENST00000622633 PLCL2Q9UPR0 1127 aa11.92□□□□□ -0.5
LITAF-221ENST00000622633 TRBV5-3A0A0A0MS03 114 aa11.92□□□□□ -0.5
LITAF-221ENST00000622633 MITFO75030 526 aaPredicted RBP11.92□□□□□ -0.5
LITAF-221ENST00000622633 STK16O75716 305 aa11.92□□□□□ -0.5
LITAF-221ENST00000622633 WDR47O94967 919 aa11.92□□□□□ -0.5
LITAF-221ENST00000622633 CD53P19397 219 aa11.92□□□□□ -0.5
LITAF-221ENST00000622633 ISL1P61371 349 aa11.92□□□□□ -0.5
LITAF-221ENST00000622633 SMAD3P84022 425 aaKnown RBP11.92□□□□□ -0.5
LITAF-221ENST00000622633 LAPTM4AQ15012 233 aa11.92□□□□□ -0.5
LITAF-221ENST00000622633 BAK1Q16611 211 aa11.92□□□□□ -0.5
LITAF-221ENST00000622633 SLC8B1Q6J4K2 584 aa11.92□□□□□ -0.5
LITAF-221ENST00000622633 DET1Q7L5Y6 550 aa11.92□□□□□ -0.5
LITAF-221ENST00000622633 GDPD1Q8N9F7 314 aa11.92□□□□□ -0.5
LITAF-221ENST00000622633 NLGN4YQ8NFZ3 816 aaPredicted RBP11.92□□□□□ -0.5
LITAF-221ENST00000622633 OR5K1Q8NHB7 308 aa11.92□□□□□ -0.5
LITAF-221ENST00000622633 OVCA2Q8WZ82 227 aa11.92□□□□□ -0.5
LITAF-221ENST00000622633 RAB7BQ96AH8 199 aa11.92□□□□□ -0.5
LITAF-221ENST00000622633 SLC22A12Q96S37 553 aa11.92□□□□□ -0.5
LITAF-221ENST00000622633 NTMT1Q9BV86 223 aa11.92□□□□□ -0.5
LITAF-221ENST00000622633 SERHLQ9NQF3 203 aa11.92□□□□□ -0.5
LITAF-221ENST00000622633 AFF4Q9UHB7 1163 aaKnown RBP11.92□□□□□ -0.5
LITAF-221ENST00000622633 OGDHLQ9ULD0 1010 aa11.92□□□□□ -0.5
LITAF-221ENST00000622633 ERVK-19Q9WJR5 959 aa11.92□□□□□ -0.5
LITAF-221ENST00000622633 GLYATL1P3A0A0U1RQE8 302 aa11.91□□□□□ -0.5
LITAF-221ENST00000622633 TRIM3O75382 744 aaPredicted RBP11.91□□□□□ -0.5
LITAF-221ENST00000622633 LRATO95237 230 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms