RNA–Protein interactions for RNA: ENST00000621676.4

VPS11-208, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS11, Length 3,313 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-208ENST00000621676 C5orf58C9J3I9 102 aa9.99□□□□□ -0.81
VPS11-208ENST00000621676 MAN2B1O00754 1011 aa9.99□□□□□ -0.81
VPS11-208ENST00000621676 LMNAP02545 664 aaKnown RBP9.99□□□□□ -0.81
VPS11-208ENST00000621676 PRPS2P11908 318 aa9.99□□□□□ -0.81
VPS11-208ENST00000621676 EPHA2P29317 976 aa9.99□□□□□ -0.81
VPS11-208ENST00000621676 OCA2Q04671 838 aa9.99□□□□□ -0.81
VPS11-208ENST00000621676 SRSF11Q05519 484 aaKnown RBP9.99□□□□□ -0.81
VPS11-208ENST00000621676 SLC13A2Q13183 592 aa9.99□□□□□ -0.81
VPS11-208ENST00000621676 DUOXA1Q1HG43 343 aa9.99□□□□□ -0.81
VPS11-208ENST00000621676 FIGNL1Q6PIW4 674 aa9.99□□□□□ -0.81
VPS11-208ENST00000621676 GHDCQ8N2G8 530 aa9.99□□□□□ -0.81
VPS11-208ENST00000621676 MINDY1Q8N5J2 469 aa9.99□□□□□ -0.81
VPS11-208ENST00000621676 HCAR2Q8TDS4 363 aa9.99□□□□□ -0.81
VPS11-208ENST00000621676 TMBIM1Q969X1 311 aa9.99□□□□□ -0.81
VPS11-208ENST00000621676 GTPBP3Q969Y2 492 aaKnown RBP9.99□□□□□ -0.81
VPS11-208ENST00000621676 ROPN1LQ96C74 230 aa9.99□□□□□ -0.81
VPS11-208ENST00000621676 MMABQ96EY8 250 aaPredicted RBP9.99□□□□□ -0.81
VPS11-208ENST00000621676 GPATCH1Q9BRR8 931 aaKnown RBP9.99□□□□□ -0.81
VPS11-208ENST00000621676 MENTQ9BUN1 341 aa9.99□□□□□ -0.81
VPS11-208ENST00000621676 KAT8Q9H7Z6 458 aaKnown RBP9.99□□□□□ -0.81
VPS11-208ENST00000621676 R4GN57 208 aa9.99□□□□□ -0.81
VPS11-208ENST00000621676 NCOR2Q9Y618 2525 aa9.99□□□□□ -0.81
VPS11-208ENST00000621676 MASP2O00187 686 aa9.99□□□□□ -0.81
VPS11-208ENST00000621676 SLC28A2O43868 658 aa9.99□□□□□ -0.81
VPS11-208ENST00000621676 OR6B1O95007 311 aa9.99□□□□□ -0.81
VPS11-208ENST00000621676 BTG2P78543 158 aa9.99□□□□□ -0.81
VPS11-208ENST00000621676 HERC3Q15034 1050 aa9.99□□□□□ -0.81
VPS11-208ENST00000621676 FGD3Q5JSP0 725 aa9.99□□□□□ -0.81
VPS11-208ENST00000621676 FAM91A1Q658Y4 838 aa9.99□□□□□ -0.81
VPS11-208ENST00000621676 UNC5DQ6UXZ4 953 aa9.99□□□□□ -0.81
VPS11-208ENST00000621676 TMEM179BQ7Z7N9 219 aa9.99□□□□□ -0.81
VPS11-208ENST00000621676 ADGRG5Q8IZF4 528 aa9.99□□□□□ -0.81
VPS11-208ENST00000621676 UBTD2Q8WUN7 234 aa9.99□□□□□ -0.81
VPS11-208ENST00000621676 RGMAQ96B86 450 aa9.99□□□□□ -0.81
VPS11-208ENST00000621676 REPS1Q96D71 796 aa9.99□□□□□ -0.81
VPS11-208ENST00000621676 COL21A1Q96P44 957 aa9.99□□□□□ -0.81
VPS11-208ENST00000621676 RIBC2Q9H4K1 309 aa9.99□□□□□ -0.81
VPS11-208ENST00000621676 LHX9Q9NQ69 397 aa9.99□□□□□ -0.81
VPS11-208ENST00000621676 NTNG1Q9Y2I2 539 aa9.99□□□□□ -0.81
VPS11-208ENST00000621676 POLEQ07864 2286 aa9.99□□□□□ -0.81
VPS11-208ENST00000621676 THADAQ6YHU6 1953 aa9.99□□□□□ -0.81
VPS11-208ENST00000621676 ATG2AQ2TAZ0 1938 aa9.99□□□□□ -0.81
VPS11-208ENST00000621676 IGHV3-20A0A0C4DH32 117 aa9.99□□□□□ -0.81
VPS11-208ENST00000621676 BCAT2O15382 392 aaPredicted RBP9.99□□□□□ -0.81
VPS11-208ENST00000621676 LDLRP01130 860 aa9.99□□□□□ -0.81
VPS11-208ENST00000621676 SLC35G6P0C7Q6 338 aa9.99□□□□□ -0.81
VPS11-208ENST00000621676 NR2F1P10589 423 aa9.99□□□□□ -0.81
VPS11-208ENST00000621676 CPMP14384 443 aa9.99□□□□□ -0.81
VPS11-208ENST00000621676 VLDLRP98155 873 aa9.99□□□□□ -0.81
VPS11-208ENST00000621676 TRMT12Q53H54 448 aaKnown RBP9.99□□□□□ -0.81
VPS11-208ENST00000621676 VN1R4Q7Z5H5 301 aa9.99□□□□□ -0.81
VPS11-208ENST00000621676 HORMAD2Q8N7B1 307 aa9.99□□□□□ -0.81
VPS11-208ENST00000621676 ATG16L2Q8NAA4 619 aa9.99□□□□□ -0.81
VPS11-208ENST00000621676 TMEM52Q8NDY8 209 aa9.99□□□□□ -0.81
VPS11-208ENST00000621676 NUDT22Q9BRQ3 303 aa9.99□□□□□ -0.81
VPS11-208ENST00000621676 MS4A8Q9BY19 250 aa9.99□□□□□ -0.81
VPS11-208ENST00000621676 GSDMCQ9BYG8 508 aa9.99□□□□□ -0.81
VPS11-208ENST00000621676 KIR3DX1Q9H7L2 352 aa9.99□□□□□ -0.81
VPS11-208ENST00000621676 GPATCH2Q9NW75 528 aa9.99□□□□□ -0.81
VPS11-208ENST00000621676 UBAP1Q9NZ09 502 aa9.99□□□□□ -0.81
VPS11-208ENST00000621676 IGHV5-51A0A0C4DH38 117 aa9.98□□□□□ -0.81
VPS11-208ENST00000621676 HRKO00198 91 aa9.98□□□□□ -0.81
VPS11-208ENST00000621676 APBB3O95704 486 aa9.98□□□□□ -0.81
VPS11-208ENST00000621676 AIFM1O95831 613 aa9.98□□□□□ -0.81
VPS11-208ENST00000621676 FURINP09958 794 aa9.98□□□□□ -0.81
VPS11-208ENST00000621676 TNNI3P19429 210 aa9.98□□□□□ -0.81
VPS11-208ENST00000621676 RABIFP47224 123 aa9.98□□□□□ -0.81
VPS11-208ENST00000621676 CCT3P49368 545 aaKnown RBP9.98□□□□□ -0.81
VPS11-208ENST00000621676 GPR68Q15743 365 aa9.98□□□□□ -0.81
VPS11-208ENST00000621676 DUSP7Q16829 419 aa9.98□□□□□ -0.81
VPS11-208ENST00000621676 ZNF658BQ4V348 819 aaPredicted RBP9.98□□□□□ -0.81
VPS11-208ENST00000621676 RUNDC3AQ59EK9 446 aa9.98□□□□□ -0.81
VPS11-208ENST00000621676 DESI1Q6ICB0 168 aa9.98□□□□□ -0.81
VPS11-208ENST00000621676 USP30Q70CQ3 517 aa9.98□□□□□ -0.81
VPS11-208ENST00000621676 NUDT13Q86X67 352 aa9.98□□□□□ -0.81
VPS11-208ENST00000621676 MARCH9Q86YJ5 346 aa9.98□□□□□ -0.81
VPS11-208ENST00000621676 EID2Q8N6I1 236 aa9.98□□□□□ -0.81
VPS11-208ENST00000621676 LINC00615Q96LM1 132 aaPredicted RBP9.98□□□□□ -0.81
VPS11-208ENST00000621676 OR2A14Q96R47 310 aa9.98□□□□□ -0.81
VPS11-208ENST00000621676 GRIP2Q9C0E4 1043 aa9.98□□□□□ -0.81
VPS11-208ENST00000621676 NRSN2Q9GZP1 204 aa9.98□□□□□ -0.81
VPS11-208ENST00000621676 PRO3102Q9H379 93 aa9.98□□□□□ -0.81
VPS11-208ENST00000621676 DDX18Q9NVP1 670 aaKnown RBP9.98□□□□□ -0.81
VPS11-208ENST00000621676 PLXNB3Q9ULL4 1909 aa9.98□□□□□ -0.81
VPS11-208ENST00000621676 SERPINI2O75830 405 aa9.98□□□□□ -0.81
VPS11-208ENST00000621676 KLHL18O94889 574 aa9.98□□□□□ -0.81
VPS11-208ENST00000621676 SOX14O95416 240 aa9.98□□□□□ -0.81
VPS11-208ENST00000621676 POU2F2P09086 479 aa9.98□□□□□ -0.81
VPS11-208ENST00000621676 XKP51811 444 aa9.98□□□□□ -0.81
VPS11-208ENST00000621676 PHEXP78562 749 aa9.98□□□□□ -0.81
VPS11-208ENST00000621676 KCNAB2Q13303 367 aa9.98□□□□□ -0.81
VPS11-208ENST00000621676 NEK10Q6ZWH5 1172 aa9.98□□□□□ -0.81
VPS11-208ENST00000621676 ZDHHC21Q8IVQ6 265 aa9.98□□□□□ -0.81
VPS11-208ENST00000621676 ENDOVQ8N8Q3 282 aaKnown RBP9.98□□□□□ -0.81
VPS11-208ENST00000621676 MS4A6EQ96DS6 147 aa9.98□□□□□ -0.81
VPS11-208ENST00000621676 CNRIP1Q96F85 164 aaPredicted RBP9.98□□□□□ -0.81
VPS11-208ENST00000621676 HSH2DQ96JZ2 352 aa9.98□□□□□ -0.81
VPS11-208ENST00000621676 NLNQ9BYT8 704 aa9.98□□□□□ -0.81
VPS11-208ENST00000621676 SPRTNQ9H040 489 aaPredicted RBP9.98□□□□□ -0.81
VPS11-208ENST00000621676 EPHX3Q9H6B9 360 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms