RNA–Protein interactions for RNA: ENST00000620882.4

LRRC39-204, Transcript of leucine rich repeat containing 39, humanhuman

TSL 5 BASIC

Gene LRRC39, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC39-204ENST00000620882 SMARCAL1Q9NZC9 954 aa3.5□□□□□ -1.85
LRRC39-204ENST00000620882 IL20RAQ9UHF4 553 aa3.5□□□□□ -1.85
LRRC39-204ENST00000620882 RNF24Q9Y225 148 aa3.5□□□□□ -1.85
LRRC39-204ENST00000620882 GAKO14976 1311 aa3.5□□□□□ -1.85
LRRC39-204ENST00000620882 CLEC18AA5D8T8 446 aa3.49□□□□□ -1.85
LRRC39-204ENST00000620882 C15orf62A8K5M9 175 aa3.49□□□□□ -1.85
LRRC39-204ENST00000620882 MEI4A8MW99 385 aa3.49□□□□□ -1.85
LRRC39-204ENST00000620882 CYR61O00622 381 aa3.49□□□□□ -1.85
LRRC39-204ENST00000620882 MLNRO43193 412 aa3.49□□□□□ -1.85
LRRC39-204ENST00000620882 RNASEH1O60930 286 aaKnown RBP3.49□□□□□ -1.85
LRRC39-204ENST00000620882 RAD51DO75771 328 aa3.49□□□□□ -1.85
LRRC39-204ENST00000620882 YEATS4O95619 227 aa3.49□□□□□ -1.85
LRRC39-204ENST00000620882 PRKACBP22694 351 aa3.49□□□□□ -1.85
LRRC39-204ENST00000620882 EPHA2P29317 976 aa3.49□□□□□ -1.85
LRRC39-204ENST00000620882 CCND2P30279 289 aa3.49□□□□□ -1.85
LRRC39-204ENST00000620882 HOXD3P31249 432 aaPredicted RBP3.49□□□□□ -1.85
LRRC39-204ENST00000620882 RPS18P62269 152 aaKnown RBP3.49□□□□□ -1.85
LRRC39-204ENST00000620882 NOP14P78316 857 aaKnown RBP3.49□□□□□ -1.85
LRRC39-204ENST00000620882 ZXDBP98169 803 aa3.49□□□□□ -1.85
LRRC39-204ENST00000620882 HSPA14Q0VDF9 509 aa3.49□□□□□ -1.85
LRRC39-204ENST00000620882 ABRQ12979 859 aa3.49□□□□□ -1.85
LRRC39-204ENST00000620882 PPIL2Q13356 520 aa3.49□□□□□ -1.85
LRRC39-204ENST00000620882 CDH18Q13634 790 aa3.49□□□□□ -1.85
LRRC39-204ENST00000620882 ACKR1Q16570 336 aa3.49□□□□□ -1.85
LRRC39-204ENST00000620882 SRSF7Q16629 238 aaKnown RBP eCLIP3.49□□□□□ -1.85
LRRC39-204ENST00000620882 DUOXA1Q1HG43 343 aa3.49□□□□□ -1.85
LRRC39-204ENST00000620882 HIKESHIQ53FT3 197 aa3.49□□□□□ -1.85
LRRC39-204ENST00000620882 CFAP157Q5JU67 520 aa3.49□□□□□ -1.85
LRRC39-204ENST00000620882 SPATA46Q5T0L3 261 aa3.49□□□□□ -1.85
LRRC39-204ENST00000620882 LIN9Q5TKA1 542 aa3.49□□□□□ -1.85
LRRC39-204ENST00000620882 AGBL2Q5U5Z8 902 aa3.49□□□□□ -1.85
LRRC39-204ENST00000620882 TTC27Q6P3X3 843 aa3.49□□□□□ -1.85
LRRC39-204ENST00000620882 PSRC1Q6PGN9 363 aaPredicted RBP3.49□□□□□ -1.85
LRRC39-204ENST00000620882 PRIMA1Q86XR5 153 aa3.49□□□□□ -1.85
LRRC39-204ENST00000620882 ERO1BQ86YB8 467 aa3.49□□□□□ -1.85
LRRC39-204ENST00000620882 CLEC18CQ8NCF0 446 aa3.49□□□□□ -1.85
LRRC39-204ENST00000620882 BPIFCQ8NFQ6 507 aa3.49□□□□□ -1.85
LRRC39-204ENST00000620882 KBTBD8Q8NFY9 601 aa3.49□□□□□ -1.85
LRRC39-204ENST00000620882 OR52B4Q8NGK2 314 aa3.49□□□□□ -1.85
LRRC39-204ENST00000620882 OR1J1Q8NGS3 322 aa3.49□□□□□ -1.85
LRRC39-204ENST00000620882 HAS2Q92819 552 aa3.49□□□□□ -1.85
LRRC39-204ENST00000620882 GGHQ92820 318 aa3.49□□□□□ -1.85
LRRC39-204ENST00000620882 TSACCQ96A04 125 aaPredicted RBP3.49□□□□□ -1.85
LRRC39-204ENST00000620882 SGK494Q96LW2 274 aa3.49□□□□□ -1.85
LRRC39-204ENST00000620882 NSMCE2Q96MF7 247 aa3.49□□□□□ -1.85
LRRC39-204ENST00000620882 C17orf77Q96MU5 243 aa3.49□□□□□ -1.85
LRRC39-204ENST00000620882 MAP3K3Q99759 626 aa3.49□□□□□ -1.85
LRRC39-204ENST00000620882 NEURL2Q9BR09 285 aa3.49□□□□□ -1.85
LRRC39-204ENST00000620882 URM1Q9BTM9 101 aaKnown RBP3.49□□□□□ -1.85
LRRC39-204ENST00000620882 OR2B2Q9GZK3 357 aa3.49□□□□□ -1.85
LRRC39-204ENST00000620882 ZMYND12Q9H0C1 365 aa3.49□□□□□ -1.85
LRRC39-204ENST00000620882 MAGT1Q9H0U3 335 aa3.49□□□□□ -1.85
LRRC39-204ENST00000620882 LRRC40Q9H9A6 602 aa3.49□□□□□ -1.85
LRRC39-204ENST00000620882 RAVER2Q9HCJ3 691 aaKnown RBP3.49□□□□□ -1.85
LRRC39-204ENST00000620882 GPN1Q9HCN4 374 aaPredicted RBP3.49□□□□□ -1.85
LRRC39-204ENST00000620882 SDHAF3Q9NRP4 125 aa3.49□□□□□ -1.85
LRRC39-204ENST00000620882 AGPAT5Q9NUQ2 364 aa3.49□□□□□ -1.85
LRRC39-204ENST00000620882 HYPKQ9NX55 129 aa3.49□□□□□ -1.85
LRRC39-204ENST00000620882 ELOVL5Q9NYP7 299 aa3.49□□□□□ -1.85
LRRC39-204ENST00000620882 KCNN3Q9UGI6 736 aa3.49□□□□□ -1.85
LRRC39-204ENST00000620882 MYO6Q9UM54 1294 aa3.49□□□□□ -1.85
LRRC39-204ENST00000620882 PLA2G4CQ9UP65 541 aa3.49□□□□□ -1.85
LRRC39-204ENST00000620882 NPHP3Q7Z494 1330 aa3.49□□□□□ -1.85
LRRC39-204ENST00000620882 PARD3Q8TEW0 1356 aa3.49□□□□□ -1.85
LRRC39-204ENST00000620882 KIF27Q86VH2 1401 aa3.49□□□□□ -1.85
LRRC39-204ENST00000620882 A0A1B0GTQ1 180 aa3.49□□□□□ -1.85
LRRC39-204ENST00000620882 MTMR11A4FU01 709 aa3.49□□□□□ -1.85
LRRC39-204ENST00000620882 SLC28A1O00337 649 aa3.49□□□□□ -1.85
LRRC39-204ENST00000620882 FOXE1O00358 373 aaPredicted RBP3.49□□□□□ -1.85
LRRC39-204ENST00000620882 PRRG2O14669 202 aa3.49□□□□□ -1.85
LRRC39-204ENST00000620882 OGTO15294 1046 aa3.49□□□□□ -1.85
LRRC39-204ENST00000620882 NIPSNAP2O75323 286 aa3.49□□□□□ -1.85
LRRC39-204ENST00000620882 GMNNO75496 209 aa3.49□□□□□ -1.85
LRRC39-204ENST00000620882 CLPXO76031 633 aa3.49□□□□□ -1.85
LRRC39-204ENST00000620882 BAG4O95429 457 aaKnown RBP3.49□□□□□ -1.85
LRRC39-204ENST00000620882 OTCP00480 354 aa3.49□□□□□ -1.85
LRRC39-204ENST00000620882 CXCL10P02778 98 aa3.49□□□□□ -1.85
LRRC39-204ENST00000620882 FHP07954 510 aa3.49□□□□□ -1.85
LRRC39-204ENST00000620882 CPA3P15088 417 aa3.49□□□□□ -1.85
LRRC39-204ENST00000620882 CALB2P22676 271 aa3.49□□□□□ -1.85
LRRC39-204ENST00000620882 CA4P22748 312 aa3.49□□□□□ -1.85
LRRC39-204ENST00000620882 OR1D2P34982 312 aa3.49□□□□□ -1.85
LRRC39-204ENST00000620882 STARP49675 285 aa3.49□□□□□ -1.85
LRRC39-204ENST00000620882 SLC26A2P50443 739 aa3.49□□□□□ -1.85
LRRC39-204ENST00000620882 TNFSF10P50591 281 aa3.49□□□□□ -1.85
LRRC39-204ENST00000620882 MTTPP55157 894 aa3.49□□□□□ -1.85
LRRC39-204ENST00000620882 CNTN2Q02246 1040 aa3.49□□□□□ -1.85
LRRC39-204ENST00000620882 SLC34A1Q06495 639 aa3.49□□□□□ -1.85
LRRC39-204ENST00000620882 FUT7Q11130 342 aa3.49□□□□□ -1.85
LRRC39-204ENST00000620882 EZH2Q15910 746 aaKnown RBP3.49□□□□□ -1.85
LRRC39-204ENST00000620882 AANATQ16613 207 aa3.49□□□□□ -1.85
LRRC39-204ENST00000620882 ZNF260Q3ZCT1 412 aa3.49□□□□□ -1.85
LRRC39-204ENST00000620882 GPAT3Q53EU6 434 aa3.49□□□□□ -1.85
LRRC39-204ENST00000620882 ZNF542PQ5EBM4 170 aa3.49□□□□□ -1.85
LRRC39-204ENST00000620882 TRNP1Q6NT89 227 aa3.49□□□□□ -1.85
LRRC39-204ENST00000620882 B3GLCTQ6Y288 498 aa3.49□□□□□ -1.85
LRRC39-204ENST00000620882 KDM7AQ6ZMT4 941 aa3.49□□□□□ -1.85
LRRC39-204ENST00000620882 GPR141Q7Z602 305 aa3.49□□□□□ -1.85
LRRC39-204ENST00000620882 RNF10Q8N5U6 811 aaKnown RBP3.49□□□□□ -1.85
LRRC39-204ENST00000620882 CSGALNACT2Q8N6G5 542 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms