RNA–Protein interactions for RNA: ENST00000620787.4

PDLIM3-212, Transcript of PDZ and LIM domain 3, humanhuman

TSL 4 BASIC

Gene PDLIM3, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-212ENST00000620787 FURINP09958 794 aa18.69■□□□□ 0.58
PDLIM3-212ENST00000620787 CTSOP43234 321 aaPredicted RBP18.69■□□□□ 0.58
PDLIM3-212ENST00000620787 LIM2P55344 173 aa18.69■□□□□ 0.58
PDLIM3-212ENST00000620787 GALK2Q01415 458 aa18.69■□□□□ 0.58
PDLIM3-212ENST00000620787 NCF4Q15080 339 aa18.69■□□□□ 0.58
PDLIM3-212ENST00000620787 YIF1BQ5BJH7 314 aa18.69■□□□□ 0.58
PDLIM3-212ENST00000620787 NANOGP1Q8N7R0 232 aa18.69■□□□□ 0.58
PDLIM3-212ENST00000620787 ANGPT4Q9Y264 503 aa18.69■□□□□ 0.58
PDLIM3-212ENST00000620787 SNX11Q9Y5W9 270 aa18.69■□□□□ 0.58
PDLIM3-212ENST00000620787 A0A0B4J293 547 aa18.68■□□□□ 0.58
PDLIM3-212ENST00000620787 ADAP00813 363 aa18.68■□□□□ 0.58
PDLIM3-212ENST00000620787 YES1P07947 543 aa18.68■□□□□ 0.58
PDLIM3-212ENST00000620787 CSF3P09919 207 aa18.68■□□□□ 0.58
PDLIM3-212ENST00000620787 OSMP13725 252 aa18.68■□□□□ 0.58
PDLIM3-212ENST00000620787 CHI3L1P36222 383 aaPredicted RBP18.68■□□□□ 0.58
PDLIM3-212ENST00000620787 PDE7AQ13946 482 aa18.68■□□□□ 0.58
PDLIM3-212ENST00000620787 PUM1Q14671 1186 aaKnown RBP eCLIP18.68■□□□□ 0.58
PDLIM3-212ENST00000620787 DUSP7Q16829 419 aa18.68■□□□□ 0.58
PDLIM3-212ENST00000620787 PRSS53Q2L4Q9 553 aa18.68■□□□□ 0.58
PDLIM3-212ENST00000620787 FAM131AQ6UXB0 335 aa18.68■□□□□ 0.58
PDLIM3-212ENST00000620787 CCDC149Q6ZUS6 474 aa18.68■□□□□ 0.58
PDLIM3-212ENST00000620787 PCSK9Q8NBP7 692 aaKnown RBP18.68■□□□□ 0.58
PDLIM3-212ENST00000620787 APOBEC4Q8WW27 367 aaKnown RBP18.68■□□□□ 0.58
PDLIM3-212ENST00000620787 SLC25A46Q96AG3 418 aa18.68■□□□□ 0.58
PDLIM3-212ENST00000620787 RNF31Q96EP0 1072 aa18.68■□□□□ 0.58
PDLIM3-212ENST00000620787 C11orf54Q9H0W9 315 aaPredicted RBP18.68■□□□□ 0.58
PDLIM3-212ENST00000620787 ABCB9Q9NP78 766 aa18.68■□□□□ 0.58
PDLIM3-212ENST00000620787 B4GALT6Q9UBX8 382 aa18.68■□□□□ 0.58
PDLIM3-212ENST00000620787 YIPF1Q9Y548 306 aa18.68■□□□□ 0.58
PDLIM3-212ENST00000620787 CCDC182A6NF36 153 aa18.68■□□□□ 0.58
PDLIM3-212ENST00000620787 B4DXG7 233 aa18.68■□□□□ 0.58
PDLIM3-212ENST00000620787 SOX14O95416 240 aa18.68■□□□□ 0.58
PDLIM3-212ENST00000620787 IMPA1P29218 277 aa18.68■□□□□ 0.58
PDLIM3-212ENST00000620787 BDKRB1P46663 353 aa18.68■□□□□ 0.58
PDLIM3-212ENST00000620787 SNRPD1P62314 119 aaKnown RBP18.68■□□□□ 0.58
PDLIM3-212ENST00000620787 MXD1Q05195 221 aa18.68■□□□□ 0.58
PDLIM3-212ENST00000620787 ZNF91Q05481 1191 aa18.68■□□□□ 0.58
PDLIM3-212ENST00000620787 ZDHHC20Q5W0Z9 365 aa18.68■□□□□ 0.58
PDLIM3-212ENST00000620787 C12orf73Q69YU5 71 aa18.68■□□□□ 0.58
PDLIM3-212ENST00000620787 PAQR6Q6TCH4 344 aa18.68■□□□□ 0.58
PDLIM3-212ENST00000620787 PHC2Q8IXK0 858 aa18.68■□□□□ 0.58
PDLIM3-212ENST00000620787 HS6ST3Q8IZP7 471 aa18.68■□□□□ 0.58
PDLIM3-212ENST00000620787 VWA5B2Q8N398 1253 aa18.68■□□□□ 0.58
PDLIM3-212ENST00000620787 ARL14EPQ8N8R7 260 aaPredicted RBP18.68■□□□□ 0.58
PDLIM3-212ENST00000620787 OR56A3Q8NH54 315 aa18.68■□□□□ 0.58
PDLIM3-212ENST00000620787 BTN2A2Q8WVV5 523 aa18.68■□□□□ 0.58
PDLIM3-212ENST00000620787 PKP4Q99569 1192 aa18.68■□□□□ 0.58
PDLIM3-212ENST00000620787 UCK2Q9BZX2 261 aa18.68■□□□□ 0.58
PDLIM3-212ENST00000620787 POLR2J2Q9GZM3 115 aaKnown RBP18.68■□□□□ 0.58
PDLIM3-212ENST00000620787 SSR3Q9UNL2 185 aa18.68■□□□□ 0.58
PDLIM3-212ENST00000620787 PLXNA2O75051 1894 aa18.68■□□□□ 0.58
PDLIM3-212ENST00000620787 SEC14L5O43304 696 aa18.67■□□□□ 0.58
PDLIM3-212ENST00000620787 CDRT1O95170 752 aa18.67■□□□□ 0.58
PDLIM3-212ENST00000620787 CHRNB1P11230 501 aa18.67■□□□□ 0.58
PDLIM3-212ENST00000620787 MLLT11Q13015 90 aaPredicted RBP18.67■□□□□ 0.58
PDLIM3-212ENST00000620787 ERAP2Q6P179 960 aa18.67■□□□□ 0.58
PDLIM3-212ENST00000620787 XKRXQ6PP77 449 aa18.67■□□□□ 0.58
PDLIM3-212ENST00000620787 ARMCX6Q7L4S7 300 aa18.67■□□□□ 0.58
PDLIM3-212ENST00000620787 COMMD6Q7Z4G1 85 aa18.67■□□□□ 0.58
PDLIM3-212ENST00000620787 PPCDCQ96CD2 204 aa18.67■□□□□ 0.58
PDLIM3-212ENST00000620787 MSLNLQ96KJ4 702 aa18.67■□□□□ 0.58
PDLIM3-212ENST00000620787 MCOLN1Q9GZU1 580 aa18.67■□□□□ 0.58
PDLIM3-212ENST00000620787 KIF26AQ9ULI4 1882 aaPredicted RBP18.67■□□□□ 0.58
PDLIM3-212ENST00000620787 OR2AG2A6NM03 316 aa18.67■□□□□ 0.58
PDLIM3-212ENST00000620787 PLD2O14939 933 aa18.67■□□□□ 0.58
PDLIM3-212ENST00000620787 KLHL18O94889 574 aa18.67■□□□□ 0.58
PDLIM3-212ENST00000620787 SLC16A8O95907 504 aa18.67■□□□□ 0.58
PDLIM3-212ENST00000620787 ALPPP05187 535 aa18.67■□□□□ 0.58
PDLIM3-212ENST00000620787 SRPRAP08240 638 aaKnown RBP18.67■□□□□ 0.58
PDLIM3-212ENST00000620787 DAB2P98082 770 aa18.67■□□□□ 0.58
PDLIM3-212ENST00000620787 ILKQ13418 452 aa18.67■□□□□ 0.58
PDLIM3-212ENST00000620787 E2F2Q14209 437 aa18.67■□□□□ 0.58
PDLIM3-212ENST00000620787 SEC23BQ15437 767 aa18.67■□□□□ 0.58
PDLIM3-212ENST00000620787 LIPKQ5VXJ0 399 aa18.67■□□□□ 0.58
PDLIM3-212ENST00000620787 RNLSQ5VYX0 342 aa18.67■□□□□ 0.58
PDLIM3-212ENST00000620787 SLCO4C1Q6ZQN7 724 aa18.67■□□□□ 0.58
PDLIM3-212ENST00000620787 BCDIN3DQ7Z5W3 292 aaKnown RBP18.67■□□□□ 0.58
PDLIM3-212ENST00000620787 METTL3Q86U44 580 aaKnown RBP18.67■□□□□ 0.58
PDLIM3-212ENST00000620787 RASSF5Q8WWW0 418 aa18.67■□□□□ 0.58
PDLIM3-212ENST00000620787 NEIL2Q969S2 332 aa18.67■□□□□ 0.58
PDLIM3-212ENST00000620787 ZFYVE19Q96K21 471 aa18.67■□□□□ 0.58
PDLIM3-212ENST00000620787 RIPOR3Q96MK2 946 aa18.67■□□□□ 0.58
PDLIM3-212ENST00000620787 TMEM175Q9BSA9 504 aa18.67■□□□□ 0.58
PDLIM3-212ENST00000620787 MANSC4A6NHS7 340 aaPredicted RBP18.66■□□□□ 0.58
PDLIM3-212ENST00000620787 MYL9P24844 172 aa18.66■□□□□ 0.58
PDLIM3-212ENST00000620787 CCDC58Q4VC31 144 aa18.66■□□□□ 0.58
PDLIM3-212ENST00000620787 SLC35F1Q5T1Q4 408 aa18.66■□□□□ 0.58
PDLIM3-212ENST00000620787 MED27Q6P2C8 311 aa18.66■□□□□ 0.58
PDLIM3-212ENST00000620787 PROKR2Q8NFJ6 384 aa18.66■□□□□ 0.58
PDLIM3-212ENST00000620787 WDR48Q8TAF3 677 aa18.66■□□□□ 0.58
PDLIM3-212ENST00000620787 CREB3L4Q8TEY5 395 aa18.66■□□□□ 0.58
PDLIM3-212ENST00000620787 SCAMP4Q969E2 229 aa18.66■□□□□ 0.58
PDLIM3-212ENST00000620787 TSSK6Q9BXA6 273 aa18.66■□□□□ 0.58
PDLIM3-212ENST00000620787 VN1R3Q9BXE9 311 aa18.66■□□□□ 0.58
PDLIM3-212ENST00000620787 BEX2Q9BXY8 128 aa18.66■□□□□ 0.58
PDLIM3-212ENST00000620787 TXNL4BQ9NX01 149 aaKnown RBP18.66■□□□□ 0.58
PDLIM3-212ENST00000620787 PLEKHB1Q9UF11 243 aaPredicted RBP18.66■□□□□ 0.58
PDLIM3-212ENST00000620787 RPL36Q9Y3U8 105 aaKnown RBP18.66■□□□□ 0.58
PDLIM3-212ENST00000620787 BACE2Q9Y5Z0 518 aa18.66■□□□□ 0.58
PDLIM3-212ENST00000620787 THSD7BQ9C0I4 1608 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms