RNA–Protein interactions for RNA: ENST00000618902.1

SHMT1-211, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 5 BASIC

Gene SHMT1, Length 378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-211ENST00000618902 PHF21BQ96EK2 531 aa4.98□□□□□ -1.61
SHMT1-211ENST00000618902 WDR34Q96EX3 536 aa4.98□□□□□ -1.61
SHMT1-211ENST00000618902 CRELD1Q96HD1 420 aa4.98□□□□□ -1.61
SHMT1-211ENST00000618902 LRGUKQ96M69 825 aa4.98□□□□□ -1.61
SHMT1-211ENST00000618902 SORT1Q99523 831 aa4.98□□□□□ -1.61
SHMT1-211ENST00000618902 HOPXQ9BPY8 73 aaPredicted RBP4.98□□□□□ -1.61
SHMT1-211ENST00000618902 ZFYVE21Q9BQ24 234 aa4.98□□□□□ -1.61
SHMT1-211ENST00000618902 CHST8Q9H2A9 424 aa4.98□□□□□ -1.61
SHMT1-211ENST00000618902 MRPL46Q9H2W6 279 aaKnown RBP4.98□□□□□ -1.61
SHMT1-211ENST00000618902 MUC13Q9H3R2 512 aa4.98□□□□□ -1.61
SHMT1-211ENST00000618902 KLHL31Q9H511 634 aa4.98□□□□□ -1.61
SHMT1-211ENST00000618902 PELI2Q9HAT8 420 aa4.98□□□□□ -1.61
SHMT1-211ENST00000618902 CPNE5Q9HCH3 593 aa4.98□□□□□ -1.61
SHMT1-211ENST00000618902 TNFRSF12AQ9NP84 129 aa4.98□□□□□ -1.61
SHMT1-211ENST00000618902 TMEM184CQ9NVA4 438 aa4.98□□□□□ -1.61
SHMT1-211ENST00000618902 DNAJC11Q9NVH1 559 aa4.98□□□□□ -1.61
SHMT1-211ENST00000618902 C5AR2Q9P296 337 aa4.98□□□□□ -1.61
SHMT1-211ENST00000618902 DHCR7Q9UBM7 475 aaKnown RBP4.98□□□□□ -1.61
SHMT1-211ENST00000618902 IL17BQ9UHF5 180 aa4.98□□□□□ -1.61
SHMT1-211ENST00000618902 PCTPQ9UKL6 214 aa4.98□□□□□ -1.61
SHMT1-211ENST00000618902 ZNF490Q9ULM2 529 aaPredicted RBP4.98□□□□□ -1.61
SHMT1-211ENST00000618902 POMPQ9Y244 141 aa4.98□□□□□ -1.61
SHMT1-211ENST00000618902 RUVBL1Q9Y265 456 aaKnown RBP4.98□□□□□ -1.61
SHMT1-211ENST00000618902 RNF11Q9Y3C5 154 aa4.98□□□□□ -1.61
SHMT1-211ENST00000618902 SEC23IPQ9Y6Y8 1000 aaKnown RBP4.98□□□□□ -1.61
SHMT1-211ENST00000618902 PCSK5Q92824 1860 aa4.98□□□□□ -1.61
SHMT1-211ENST00000618902 NAV2Q8IVL1 2488 aa4.97□□□□□ -1.61
SHMT1-211ENST00000618902 A0A1B0GX78 115 aa4.97□□□□□ -1.61
SHMT1-211ENST00000618902 A0A1W2PQ72 361 aa4.97□□□□□ -1.61
SHMT1-211ENST00000618902 TRBC2A0A5B9 178 aa4.97□□□□□ -1.61
SHMT1-211ENST00000618902 URADA6NGE7 173 aa4.97□□□□□ -1.61
SHMT1-211ENST00000618902 SYCE1LA8MT33 242 aa4.97□□□□□ -1.61
SHMT1-211ENST00000618902 BBIP1A8MTZ0 92 aa4.97□□□□□ -1.61
SHMT1-211ENST00000618902 H0YIG0 161 aa4.97□□□□□ -1.61
SHMT1-211ENST00000618902 STX16-NPEPL1H3BU86 382 aa4.97□□□□□ -1.61
SHMT1-211ENST00000618902 K7EPI3 171 aa4.97□□□□□ -1.61
SHMT1-211ENST00000618902 UBFD1O14562 309 aaKnown RBP4.97□□□□□ -1.61
SHMT1-211ENST00000618902 STX16O14662 325 aa4.97□□□□□ -1.61
SHMT1-211ENST00000618902 FFAR3O14843 346 aa4.97□□□□□ -1.61
SHMT1-211ENST00000618902 GPR42O15529 346 aa4.97□□□□□ -1.61
SHMT1-211ENST00000618902 FOXS1O43638 330 aa4.97□□□□□ -1.61
SHMT1-211ENST00000618902 OR1F1O43749 312 aa4.97□□□□□ -1.61
SHMT1-211ENST00000618902 BCAS2O75934 225 aaPredicted RBP4.97□□□□□ -1.61
SHMT1-211ENST00000618902 TNFAIP8O95379 198 aa4.97□□□□□ -1.61
SHMT1-211ENST00000618902 ALPPP05187 535 aa4.97□□□□□ -1.61
SHMT1-211ENST00000618902 EIF2S1P05198 315 aaKnown RBP4.97□□□□□ -1.61
SHMT1-211ENST00000618902 FGF4P08620 206 aa4.97□□□□□ -1.61
SHMT1-211ENST00000618902 C1GALT1C1LP0DN25 315 aa4.97□□□□□ -1.61
SHMT1-211ENST00000618902 KITP10721 976 aa4.97□□□□□ -1.61
SHMT1-211ENST00000618902 ICAM2P13598 275 aa4.97□□□□□ -1.61
SHMT1-211ENST00000618902 GFAPP14136 432 aa4.97□□□□□ -1.61
SHMT1-211ENST00000618902 PAX7P23759 505 aa4.97□□□□□ -1.61
SHMT1-211ENST00000618902 ATP5F1P24539 256 aaPredicted RBP4.97□□□□□ -1.61
SHMT1-211ENST00000618902 CXCR2P25025 360 aa4.97□□□□□ -1.61
SHMT1-211ENST00000618902 EEF1DP29692 281 aaKnown RBP4.97□□□□□ -1.61
SHMT1-211ENST00000618902 CASP2P42575 452 aa4.97□□□□□ -1.61
SHMT1-211ENST00000618902 PIK3CGP48736 1102 aa4.97□□□□□ -1.61
SHMT1-211ENST00000618902 CCR8P51685 355 aa4.97□□□□□ -1.61
SHMT1-211ENST00000618902 CHN2P52757 468 aa4.97□□□□□ -1.61
SHMT1-211ENST00000618902 EFNA3P52797 238 aa4.97□□□□□ -1.61
SHMT1-211ENST00000618902 CDH13P55290 713 aa4.97□□□□□ -1.61
SHMT1-211ENST00000618902 RPS15AP62244 130 aaKnown RBP4.97□□□□□ -1.61
SHMT1-211ENST00000618902 TUBA4AP68366 448 aa4.97□□□□□ -1.61
SHMT1-211ENST00000618902 CYP4F2P78329 520 aa4.97□□□□□ -1.61
SHMT1-211ENST00000618902 TBL3Q12788 808 aaKnown RBP4.97□□□□□ -1.61
SHMT1-211ENST00000618902 CHIT1Q13231 466 aa4.97□□□□□ -1.61
SHMT1-211ENST00000618902 KCNAB2Q13303 367 aa4.97□□□□□ -1.61
SHMT1-211ENST00000618902 GTF2H2Q13888 395 aa4.97□□□□□ -1.61
SHMT1-211ENST00000618902 SLC9A5Q14940 896 aa4.97□□□□□ -1.61
SHMT1-211ENST00000618902 NCF4Q15080 339 aa4.97□□□□□ -1.61
SHMT1-211ENST00000618902 PDCD2Q16342 344 aaPredicted RBP4.97□□□□□ -1.61
SHMT1-211ENST00000618902 TBR1Q16650 682 aa4.97□□□□□ -1.61
SHMT1-211ENST00000618902 NDUFA9Q16795 377 aa4.97□□□□□ -1.61
SHMT1-211ENST00000618902 C11orf91Q3C1V1 193 aa4.97□□□□□ -1.61
SHMT1-211ENST00000618902 LIN52Q52LA3 116 aa4.97□□□□□ -1.61
SHMT1-211ENST00000618902 COQ5Q5HYK3 327 aa4.97□□□□□ -1.61
SHMT1-211ENST00000618902 TCHHL1Q5QJ38 904 aaPredicted RBP4.97□□□□□ -1.61
SHMT1-211ENST00000618902 C10orf62Q5T681 223 aaPredicted RBP4.97□□□□□ -1.61
SHMT1-211ENST00000618902 OGFRL1Q5TC84 451 aaPredicted RBP4.97□□□□□ -1.61
SHMT1-211ENST00000618902 C1orf189Q5VU69 101 aa4.97□□□□□ -1.61
SHMT1-211ENST00000618902 AP1ARQ63HQ0 302 aa4.97□□□□□ -1.61
SHMT1-211ENST00000618902 GTF2H2CQ6P1K8 395 aa4.97□□□□□ -1.61
SHMT1-211ENST00000618902 LETMD1Q6P1Q0 360 aa4.97□□□□□ -1.61
SHMT1-211ENST00000618902 IZUMO2Q6UXV1 221 aa4.97□□□□□ -1.61
SHMT1-211ENST00000618902 OVCH1Q7RTY7 1134 aa4.97□□□□□ -1.61
SHMT1-211ENST00000618902 LRRC70Q7Z2Q7 622 aa4.97□□□□□ -1.61
SHMT1-211ENST00000618902 ADCK2Q7Z695 626 aa4.97□□□□□ -1.61
SHMT1-211ENST00000618902 UBE3DQ7Z6J8 389 aa4.97□□□□□ -1.61
SHMT1-211ENST00000618902 ZNF605Q86T29 641 aa4.97□□□□□ -1.61
SHMT1-211ENST00000618902 DEFB107AQ8IZN7 70 aa4.97□□□□□ -1.61
SHMT1-211ENST00000618902 PQLC1Q8N2U9 271 aa4.97□□□□□ -1.61
SHMT1-211ENST00000618902 CSNK1A1LQ8N752 337 aa4.97□□□□□ -1.61
SHMT1-211ENST00000618902 PACRGLQ8N7B6 248 aa4.97□□□□□ -1.61
SHMT1-211ENST00000618902 SNX31Q8N9S9 440 aa4.97□□□□□ -1.61
SHMT1-211ENST00000618902 TTC29Q8NA56 475 aaPredicted RBP4.97□□□□□ -1.61
SHMT1-211ENST00000618902 PCYOX1LQ8NBM8 494 aa4.97□□□□□ -1.61
SHMT1-211ENST00000618902 MFSD9Q8NBP5 474 aa4.97□□□□□ -1.61
SHMT1-211ENST00000618902 KCT2Q8NC54 265 aa4.97□□□□□ -1.61
SHMT1-211ENST00000618902 OR2Y1Q8NGV0 311 aa4.97□□□□□ -1.61
SHMT1-211ENST00000618902 SLC26A7Q8TE54 656 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms