RNA–Protein interactions for RNA: ENST00000617641.4

PCDHGC3-205, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGC3, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-205ENST00000617641 RAD21L1Q9H4I0 556 aa16.46■□□□□ 0.23
PCDHGC3-205ENST00000617641 SIRT3Q9NTG7 399 aaPredicted RBP16.46■□□□□ 0.23
PCDHGC3-205ENST00000617641 DMTF1Q9Y222 760 aa16.46■□□□□ 0.23
PCDHGC3-205ENST00000617641 SPTY2D1-AS1A0A0U1RR47 76 aa16.46■□□□□ 0.23
PCDHGC3-205ENST00000617641 GSAPA4D1B5 854 aa16.46■□□□□ 0.23
PCDHGC3-205ENST00000617641 MYO1GB0I1T2 1018 aa16.46■□□□□ 0.23
PCDHGC3-205ENST00000617641 SOX1O00570 391 aaPredicted RBP16.46■□□□□ 0.23
PCDHGC3-205ENST00000617641 VIPP01282 170 aa16.46■□□□□ 0.23
PCDHGC3-205ENST00000617641 UGT2B7P16662 529 aa16.46■□□□□ 0.23
PCDHGC3-205ENST00000617641 MAGP20916 626 aa16.46■□□□□ 0.23
PCDHGC3-205ENST00000617641 CERS1P27544 350 aa16.46■□□□□ 0.23
PCDHGC3-205ENST00000617641 KCNJ10P78508 379 aa16.46■□□□□ 0.23
PCDHGC3-205ENST00000617641 RBBP4Q09028 425 aa16.46■□□□□ 0.23
PCDHGC3-205ENST00000617641 FZD2Q14332 565 aa16.46■□□□□ 0.23
PCDHGC3-205ENST00000617641 KIR2DS3Q14952 304 aa16.46■□□□□ 0.23
PCDHGC3-205ENST00000617641 SAXO2Q658L1 398 aa16.46■□□□□ 0.23
PCDHGC3-205ENST00000617641 TTC33Q6PID6 262 aaPredicted RBP16.46■□□□□ 0.23
PCDHGC3-205ENST00000617641 USP51Q70EK9 711 aa16.46■□□□□ 0.23
PCDHGC3-205ENST00000617641 VN1R4Q7Z5H5 301 aa16.46■□□□□ 0.23
PCDHGC3-205ENST00000617641 TSPAN14Q8NG11 270 aa16.46■□□□□ 0.23
PCDHGC3-205ENST00000617641 SLC22A18Q96BI1 424 aa16.46■□□□□ 0.23
PCDHGC3-205ENST00000617641 ZBED6CLQ96FA7 236 aaPredicted RBP16.46■□□□□ 0.23
PCDHGC3-205ENST00000617641 ZNF764Q96H86 408 aaPredicted RBP16.46■□□□□ 0.23
PCDHGC3-205ENST00000617641 RBM4BQ9BQ04 359 aaKnown RBP16.46■□□□□ 0.23
PCDHGC3-205ENST00000617641 RBM4Q9BWF3 364 aaKnown RBP16.46■□□□□ 0.23
PCDHGC3-205ENST00000617641 FAM192AQ9GZU8 254 aa16.46■□□□□ 0.23
PCDHGC3-205ENST00000617641 TM9SF3Q9HD45 589 aa16.46■□□□□ 0.23
PCDHGC3-205ENST00000617641 USE1Q9NZ43 259 aa16.46■□□□□ 0.23
PCDHGC3-205ENST00000617641 DUSP12Q9UNI6 340 aa16.46■□□□□ 0.23
PCDHGC3-205ENST00000617641 ATG4BQ9Y4P1 393 aa16.46■□□□□ 0.23
PCDHGC3-205ENST00000617641 ASB4Q9Y574 426 aa16.46■□□□□ 0.23
PCDHGC3-205ENST00000617641 H0YAE9 185 aa16.45■□□□□ 0.22
PCDHGC3-205ENST00000617641 HS6ST1O60243 411 aa16.45■□□□□ 0.22
PCDHGC3-205ENST00000617641 B4GALT2O60909 372 aa16.45■□□□□ 0.22
PCDHGC3-205ENST00000617641 ARAFP10398 606 aa16.45■□□□□ 0.22
PCDHGC3-205ENST00000617641 DRD2P14416 443 aa16.45■□□□□ 0.22
PCDHGC3-205ENST00000617641 DDX5P17844 614 aaKnown RBP16.45■□□□□ 0.22
PCDHGC3-205ENST00000617641 CDK6Q00534 326 aa16.45■□□□□ 0.22
PCDHGC3-205ENST00000617641 MRM1Q6IN84 353 aaKnown RBP16.45■□□□□ 0.22
PCDHGC3-205ENST00000617641 CEP68Q76N32 757 aa16.45■□□□□ 0.22
PCDHGC3-205ENST00000617641 KCT2Q8NC54 265 aa16.45■□□□□ 0.22
PCDHGC3-205ENST00000617641 NEURL3Q96EH8 262 aa16.45■□□□□ 0.22
PCDHGC3-205ENST00000617641 C7orf34Q96L11 122 aa16.45■□□□□ 0.22
PCDHGC3-205ENST00000617641 MBOAT4Q96T53 435 aa16.45■□□□□ 0.22
PCDHGC3-205ENST00000617641 DOHHQ9BU89 302 aa16.45■□□□□ 0.22
PCDHGC3-205ENST00000617641 GSDMCQ9BYG8 508 aa16.45■□□□□ 0.22
PCDHGC3-205ENST00000617641 KLHL25Q9H0H3 589 aa16.45■□□□□ 0.22
PCDHGC3-205ENST00000617641 NEUROD4Q9HD90 331 aa16.45■□□□□ 0.22
PCDHGC3-205ENST00000617641 ACTR10Q9NZ32 417 aa16.45■□□□□ 0.22
PCDHGC3-205ENST00000617641 CPNE7Q9UBL6 633 aa16.45■□□□□ 0.22
PCDHGC3-205ENST00000617641 FBXW2Q9UKT8 454 aa16.45■□□□□ 0.22
PCDHGC3-205ENST00000617641 BAG5Q9UL15 447 aa16.45■□□□□ 0.22
PCDHGC3-205ENST00000617641 PADI4Q9UM07 663 aa16.45■□□□□ 0.22
PCDHGC3-205ENST00000617641 A0A1W2PPC4 97 aa16.45■□□□□ 0.22
PCDHGC3-205ENST00000617641 A0A1W2PR48 441 aa16.45■□□□□ 0.22
PCDHGC3-205ENST00000617641 DSTNP60981 165 aa16.45■□□□□ 0.22
PCDHGC3-205ENST00000617641 RPS15AP62244 130 aaKnown RBP16.45■□□□□ 0.22
PCDHGC3-205ENST00000617641 C1orf61Q13536 156 aa16.45■□□□□ 0.22
PCDHGC3-205ENST00000617641 UBXN2BQ14CS0 331 aa16.45■□□□□ 0.22
PCDHGC3-205ENST00000617641 ZNF630Q2M218 657 aaPredicted RBP16.45■□□□□ 0.22
PCDHGC3-205ENST00000617641 SPDYE7PQ495Y7 208 aa16.45■□□□□ 0.22
PCDHGC3-205ENST00000617641 TNFAIP8L2Q6P589 184 aaPredicted RBP16.45■□□□□ 0.22
PCDHGC3-205ENST00000617641 SHQ1Q6PI26 577 aaKnown RBP16.45■□□□□ 0.22
PCDHGC3-205ENST00000617641 TAF8Q7Z7C8 310 aa16.45■□□□□ 0.22
PCDHGC3-205ENST00000617641 PATL1Q86TB9 770 aaKnown RBP16.45■□□□□ 0.22
PCDHGC3-205ENST00000617641 HIPK1Q86Z02 1210 aa16.45■□□□□ 0.22
PCDHGC3-205ENST00000617641 DEFB119Q8N690 84 aa16.45■□□□□ 0.22
PCDHGC3-205ENST00000617641 METTL25Q8N6Q8 603 aa16.45■□□□□ 0.22
PCDHGC3-205ENST00000617641 HORMAD2Q8N7B1 307 aa16.45■□□□□ 0.22
PCDHGC3-205ENST00000617641 TAMM41Q96BW9 452 aa16.45■□□□□ 0.22
PCDHGC3-205ENST00000617641 SLC6A18Q96N87 628 aa16.45■□□□□ 0.22
PCDHGC3-205ENST00000617641 ORAI3Q9BRQ5 295 aa16.45■□□□□ 0.22
PCDHGC3-205ENST00000617641 FAIM2Q9BWQ8 316 aa16.45■□□□□ 0.22
PCDHGC3-205ENST00000617641 GRIP2Q9C0E4 1043 aa16.45■□□□□ 0.22
PCDHGC3-205ENST00000617641 YIPF3Q9GZM5 350 aa16.45■□□□□ 0.22
PCDHGC3-205ENST00000617641 CLK4Q9HAZ1 481 aaKnown RBP16.45■□□□□ 0.22
PCDHGC3-205ENST00000617641 LTB4R2Q9NPC1 389 aa16.45■□□□□ 0.22
PCDHGC3-205ENST00000617641 TAS2R7Q9NYW3 318 aa16.45■□□□□ 0.22
PCDHGC3-205ENST00000617641 PGRMC2O15173 223 aa16.44■□□□□ 0.22
PCDHGC3-205ENST00000617641 TNFRSF1BP20333 461 aa16.44■□□□□ 0.22
PCDHGC3-205ENST00000617641 RPL5P46777 297 aaKnown RBP16.44■□□□□ 0.22
PCDHGC3-205ENST00000617641 PXNP49023 591 aaPredicted RBP16.44■□□□□ 0.22
PCDHGC3-205ENST00000617641 STXBP1P61764 594 aaKnown RBP16.44■□□□□ 0.22
PCDHGC3-205ENST00000617641 SNRPNP63162 240 aaKnown RBP16.44■□□□□ 0.22
PCDHGC3-205ENST00000617641 SELENOWP63302 87 aa16.44■□□□□ 0.22
PCDHGC3-205ENST00000617641 IQCCQ4KMZ1 466 aa16.44■□□□□ 0.22
PCDHGC3-205ENST00000617641 FBXO42Q6P3S6 717 aa16.44■□□□□ 0.22
PCDHGC3-205ENST00000617641 CEACAM20Q6UY09 585 aa16.44■□□□□ 0.22
PCDHGC3-205ENST00000617641 TMEM26Q6ZUK4 368 aa16.44■□□□□ 0.22
PCDHGC3-205ENST00000617641 TRAPPC9Q96Q05 1148 aa16.44■□□□□ 0.22
PCDHGC3-205ENST00000617641 TWSG1Q9GZX9 223 aa16.44■□□□□ 0.22
PCDHGC3-205ENST00000617641 GLIPR2Q9H4G4 154 aa16.44■□□□□ 0.22
PCDHGC3-205ENST00000617641 SLC35C2Q9NQQ7 365 aa16.44■□□□□ 0.22
PCDHGC3-205ENST00000617641 GPR27Q9NS67 375 aa16.44■□□□□ 0.22
PCDHGC3-205ENST00000617641 ACSS1Q9NUB1 689 aaPredicted RBP16.44■□□□□ 0.22
PCDHGC3-205ENST00000617641 IGHV1OR15-9A0A0B4J2B8 117 aa16.44■□□□□ 0.22
PCDHGC3-205ENST00000617641 OR2A25A4D2G3 310 aa16.44■□□□□ 0.22
PCDHGC3-205ENST00000617641 CTSVO60911 334 aa16.44■□□□□ 0.22
PCDHGC3-205ENST00000617641 PTGER1P34995 402 aa16.44■□□□□ 0.22
PCDHGC3-205ENST00000617641 CDH15P55291 814 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms