RNA–Protein interactions for RNA: ENST00000616973.4

NR1H3-235, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1H3, Length 1,919 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-235ENST00000616973 KRT84Q9NSB2 600 aa14.95□□□□□ -0.02
NR1H3-235ENST00000616973 SIRT3Q9NTG7 399 aaPredicted RBP14.95□□□□□ -0.02
NR1H3-235ENST00000616973 TEX10Q9NXF1 929 aaPredicted RBP14.95□□□□□ -0.02
NR1H3-235ENST00000616973 SCHIP1Q9P0W5 487 aaPredicted RBP14.95□□□□□ -0.02
NR1H3-235ENST00000616973 KIF17Q9P2E2 1029 aa14.95□□□□□ -0.02
NR1H3-235ENST00000616973 PCOLCE2Q9UKZ9 415 aa14.95□□□□□ -0.02
NR1H3-235ENST00000616973 NDRG4Q9ULP0 352 aaKnown RBP14.95□□□□□ -0.02
NR1H3-235ENST00000616973 NAALAD2Q9Y3Q0 740 aa14.95□□□□□ -0.02
NR1H3-235ENST00000616973 LYVE1Q9Y5Y7 322 aa14.95□□□□□ -0.02
NR1H3-235ENST00000616973 PIAS3Q9Y6X2 628 aa14.95□□□□□ -0.02
NR1H3-235ENST00000616973 FANCMQ8IYD8 2048 aa14.95□□□□□ -0.02
NR1H3-235ENST00000616973 C5orf42Q9H799 3197 aa14.94□□□□□ -0.02
NR1H3-235ENST00000616973 SLC1A7O00341 560 aa14.94□□□□□ -0.02
NR1H3-235ENST00000616973 CMPK1P30085 196 aa14.94□□□□□ -0.02
NR1H3-235ENST00000616973 RRM2P31350 389 aa14.94□□□□□ -0.02
NR1H3-235ENST00000616973 SSR2P43308 183 aa14.94□□□□□ -0.02
NR1H3-235ENST00000616973 CXCR4P61073 352 aa14.94□□□□□ -0.02
NR1H3-235ENST00000616973 HYAL2Q12891 473 aa14.94□□□□□ -0.02
NR1H3-235ENST00000616973 REEP3Q6NUK4 255 aa14.94□□□□□ -0.02
NR1H3-235ENST00000616973 TTC29Q8NA56 475 aaPredicted RBP14.94□□□□□ -0.02
NR1H3-235ENST00000616973 ATG16L2Q8NAA4 619 aa14.94□□□□□ -0.02
NR1H3-235ENST00000616973 GEMIN6Q8WXD5 167 aaKnown RBP14.94□□□□□ -0.02
NR1H3-235ENST00000616973 OR1E3Q8WZA6 343 aa14.94□□□□□ -0.02
NR1H3-235ENST00000616973 PITX2Q99697 317 aa14.94□□□□□ -0.02
NR1H3-235ENST00000616973 FAIM2Q9BWQ8 316 aa14.94□□□□□ -0.02
NR1H3-235ENST00000616973 OR6C2Q9NZP2 312 aa14.94□□□□□ -0.02
NR1H3-235ENST00000616973 SNX8Q9Y5X2 465 aa14.94□□□□□ -0.02
NR1H3-235ENST00000616973 A8MVJ9 347 aa14.94□□□□□ -0.02
NR1H3-235ENST00000616973 TNFRSF10CO14798 259 aa14.94□□□□□ -0.02
NR1H3-235ENST00000616973 DNAJB5O75953 348 aa14.94□□□□□ -0.02
NR1H3-235ENST00000616973 OPN1SWP03999 348 aa14.94□□□□□ -0.02
NR1H3-235ENST00000616973 ACADMP11310 421 aa14.94□□□□□ -0.02
NR1H3-235ENST00000616973 XAF1Q6GPH4 301 aa14.94□□□□□ -0.02
NR1H3-235ENST00000616973 MRM1Q6IN84 353 aaKnown RBP14.94□□□□□ -0.02
NR1H3-235ENST00000616973 ZNF425Q6IV72 752 aa14.94□□□□□ -0.02
NR1H3-235ENST00000616973 CEACAM20Q6UY09 585 aa14.94□□□□□ -0.02
NR1H3-235ENST00000616973 TSPYL5Q86VY4 417 aaPredicted RBP14.94□□□□□ -0.02
NR1H3-235ENST00000616973 SPARTQ8N0X7 666 aa14.94□□□□□ -0.02
NR1H3-235ENST00000616973 MFSD9Q8NBP5 474 aa14.94□□□□□ -0.02
NR1H3-235ENST00000616973 SMRP1Q8NCR6 262 aa14.94□□□□□ -0.02
NR1H3-235ENST00000616973 OR4C15Q8NGM1 316 aa14.94□□□□□ -0.02
NR1H3-235ENST00000616973 OR13F1Q8NGS4 319 aa14.94□□□□□ -0.02
NR1H3-235ENST00000616973 GIPC3Q8TF64 312 aa14.94□□□□□ -0.02
NR1H3-235ENST00000616973 EXOSC8Q96B26 276 aaKnown RBP14.94□□□□□ -0.02
NR1H3-235ENST00000616973 MS4A6EQ96DS6 147 aa14.94□□□□□ -0.02
NR1H3-235ENST00000616973 MAGED4Q96JG8 741 aa14.94□□□□□ -0.02
NR1H3-235ENST00000616973 APOL4Q9BPW4 351 aa14.94□□□□□ -0.02
NR1H3-235ENST00000616973 C17orf62Q9BQA9 187 aa14.94□□□□□ -0.02
NR1H3-235ENST00000616973 DPH7Q9BTV6 452 aa14.94□□□□□ -0.02
NR1H3-235ENST00000616973 TMEM121BQ9BXQ6 578 aaPredicted RBP14.94□□□□□ -0.02
NR1H3-235ENST00000616973 GABARAPL3Q9BY60 117 aa14.94□□□□□ -0.02
NR1H3-235ENST00000616973 ZSCAN32Q9NX65 697 aa14.94□□□□□ -0.02
NR1H3-235ENST00000616973 TMEM9Q9P0T7 183 aa14.94□□□□□ -0.02
NR1H3-235ENST00000616973 TBC1D29Q9UFV1 150 aa14.94□□□□□ -0.02
NR1H3-235ENST00000616973 SNX7Q9UNH6 387 aa14.94□□□□□ -0.02
NR1H3-235ENST00000616973 TNFRSF11BO00300 401 aa14.93□□□□□ -0.02
NR1H3-235ENST00000616973 HAT1O14929 419 aa14.93□□□□□ -0.02
NR1H3-235ENST00000616973 SEC14L2O76054 403 aa14.93□□□□□ -0.02
NR1H3-235ENST00000616973 SERPIND1P05546 499 aa14.93□□□□□ -0.02
NR1H3-235ENST00000616973 JUNDP17535 347 aa14.93□□□□□ -0.02
NR1H3-235ENST00000616973 AGXTP21549 392 aa14.93□□□□□ -0.02
NR1H3-235ENST00000616973 HNRNPA2B1P22626 353 aaKnown RBP14.93□□□□□ -0.02
NR1H3-235ENST00000616973 MAGEA8P43361 318 aa14.93□□□□□ -0.02
NR1H3-235ENST00000616973 TSFMP43897 325 aaKnown RBP14.93□□□□□ -0.02
NR1H3-235ENST00000616973 PLA2G16P53816 162 aa14.93□□□□□ -0.02
NR1H3-235ENST00000616973 CLDN2P57739 230 aa14.93□□□□□ -0.02
NR1H3-235ENST00000616973 IL5RAQ01344 420 aa14.93□□□□□ -0.02
NR1H3-235ENST00000616973 LRRC32Q14392 662 aa14.93□□□□□ -0.02
NR1H3-235ENST00000616973 SLC9A5Q14940 896 aa14.93□□□□□ -0.02
NR1H3-235ENST00000616973 NEDD8Q15843 81 aa14.93□□□□□ -0.02
NR1H3-235ENST00000616973 EOGTQ5NDL2 527 aa14.93□□□□□ -0.02
NR1H3-235ENST00000616973 KIAA1614Q5VZ46 1190 aa14.93□□□□□ -0.02
NR1H3-235ENST00000616973 ENPP7Q6UWV6 458 aa14.93□□□□□ -0.02
NR1H3-235ENST00000616973 ZNF793Q6ZN11 406 aa14.93□□□□□ -0.02
NR1H3-235ENST00000616973 EP400NLQ6ZTU2 488 aa14.93□□□□□ -0.02
NR1H3-235ENST00000616973 C6orf120Q7Z4R8 191 aa14.93□□□□□ -0.02
NR1H3-235ENST00000616973 FBXL6Q8N531 539 aa14.93□□□□□ -0.02
NR1H3-235ENST00000616973 HORMAD2Q8N7B1 307 aa14.93□□□□□ -0.02
NR1H3-235ENST00000616973 AMER3Q8N944 861 aa14.93□□□□□ -0.02
NR1H3-235ENST00000616973 SRFBP1Q8NEF9 429 aaKnown RBP14.93□□□□□ -0.02
NR1H3-235ENST00000616973 BMFQ96LC9 184 aa14.93□□□□□ -0.02
NR1H3-235ENST00000616973 PRDM7Q9NQW5 492 aa14.93□□□□□ -0.02
NR1H3-235ENST00000616973 SPHK1Q9NYA1 384 aa14.93□□□□□ -0.02
NR1H3-235ENST00000616973 ZNF451Q9Y4E5 1061 aa14.93□□□□□ -0.02
NR1H3-235ENST00000616973 PCDHGA4Q9Y5G9 962 aa14.93□□□□□ -0.02
NR1H3-235ENST00000616973 GMPPBQ9Y5P6 360 aa14.93□□□□□ -0.02
NR1H3-235ENST00000616973 PRAMEF33A0A0G2JMD5 474 aa14.92□□□□□ -0.02
NR1H3-235ENST00000616973 PRAMEF25A6NGN4 478 aa14.92□□□□□ -0.02
NR1H3-235ENST00000616973 GUCY1B2O75343 617 aa14.92□□□□□ -0.02
NR1H3-235ENST00000616973 HTR1AP08908 422 aa14.92□□□□□ -0.02
NR1H3-235ENST00000616973 ANXA8P13928 327 aa14.92□□□□□ -0.02
NR1H3-235ENST00000616973 PXNP49023 591 aaPredicted RBP14.92□□□□□ -0.02
NR1H3-235ENST00000616973 NPRL3Q12980 569 aa14.92□□□□□ -0.02
NR1H3-235ENST00000616973 SIM2Q14190 667 aaPredicted RBP14.92□□□□□ -0.02
NR1H3-235ENST00000616973 COL19A1Q14993 1142 aa14.92□□□□□ -0.02
NR1H3-235ENST00000616973 NDUFAF5Q5TEU4 345 aa14.92□□□□□ -0.02
NR1H3-235ENST00000616973 FAM180BQ6P0A1 224 aa14.92□□□□□ -0.02
NR1H3-235ENST00000616973 ABHD17CQ6PCB6 329 aa14.92□□□□□ -0.02
NR1H3-235ENST00000616973 AMIGO1Q86WK6 493 aa14.92□□□□□ -0.02
NR1H3-235ENST00000616973 OR2L5Q8NG80 312 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms