RNA–Protein interactions for RNA: ENST00000616352.4

ACACA-238, Transcript of acetyl-CoA carboxylase alpha, human

TSL 1 (best)

Gene ACACA, Length 1,626 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ACACA-238	ENST00000616352	CDC26	Q8NHZ8	85 aa		21.7	■■□□□ 1.06
ACACA-238	ENST00000616352	PEX11G	Q96HA9	241 aa		21.7	■■□□□ 1.06
ACACA-238	ENST00000616352	MYLK2	Q9H1R3	596 aa		21.7	■■□□□ 1.06
ACACA-238	ENST00000616352	ZIM2	Q9NZV7	527 aa		21.7	■■□□□ 1.06
ACACA-238	ENST00000616352	TRPC4	Q9UBN4	977 aa		21.7	■■□□□ 1.06
ACACA-238	ENST00000616352	PRMT3	O60678	531 aa		21.69	■■□□□ 1.06
ACACA-238	ENST00000616352	PRKRA	O75569	313 aa	Known RBP	21.69	■■□□□ 1.06
ACACA-238	ENST00000616352	PRPS1L1	P21108	318 aa		21.69	■■□□□ 1.06
ACACA-238	ENST00000616352	CPN2	P22792	545 aa		21.69	■■□□□ 1.06
ACACA-238	ENST00000616352	BUD31	P41223	144 aa	Predicted RBP	21.69	■■□□□ 1.06
ACACA-238	ENST00000616352	XCR1	P46094	333 aa		21.69	■■□□□ 1.06
ACACA-238	ENST00000616352	NME5	P56597	212 aa		21.69	■■□□□ 1.06
ACACA-238	ENST00000616352	STX1B	P61266	288 aa		21.69	■■□□□ 1.06
ACACA-238	ENST00000616352	UFM1	P61960	85 aa		21.69	■■□□□ 1.06
ACACA-238	ENST00000616352	C2orf80	Q0P641	193 aa		21.69	■■□□□ 1.06
ACACA-238	ENST00000616352	MAP7	Q14244	749 aa		21.69	■■□□□ 1.06
ACACA-238	ENST00000616352	HEPACAM	Q14CZ8	416 aa		21.69	■■□□□ 1.06
ACACA-238	ENST00000616352	RPS6KA2	Q15349	733 aa		21.69	■■□□□ 1.06
ACACA-238	ENST00000616352	KRTCAP2	Q8N6L1	136 aa		21.69	■■□□□ 1.06
ACACA-238	ENST00000616352	FAM47B	Q8NA70	645 aa		21.69	■■□□□ 1.06
ACACA-238	ENST00000616352	ADAMTS18	Q8TE60	1221 aa		21.69	■■□□□ 1.06
ACACA-238	ENST00000616352	SCNM1	Q9BWG6	230 aa		21.69	■■□□□ 1.06
ACACA-238	ENST00000616352	PCDHA9	Q9Y5H5	950 aa		21.69	■■□□□ 1.06
ACACA-238	ENST00000616352	SPACA6	W5XKT8	324 aa		21.69	■■□□□ 1.06
ACACA-238	ENST00000616352	FAM227A	F5H4B4	570 aa		21.69	■■□□□ 1.06
ACACA-238	ENST00000616352	FCHO1	O14526	889 aa		21.69	■■□□□ 1.06
ACACA-238	ENST00000616352	CCDC22	O60826	627 aa		21.69	■■□□□ 1.06
ACACA-238	ENST00000616352	LRAT	O95237	230 aa		21.69	■■□□□ 1.06
ACACA-238	ENST00000616352	FURIN	P09958	794 aa		21.69	■■□□□ 1.06
ACACA-238	ENST00000616352	NR2F6	P10588	404 aa		21.69	■■□□□ 1.06
ACACA-238	ENST00000616352	PIM1	P11309	404 aa	Predicted RBP	21.69	■■□□□ 1.06
ACACA-238	ENST00000616352	DRD2	P14416	443 aa		21.69	■■□□□ 1.06
ACACA-238	ENST00000616352	DDC	P20711	480 aa		21.69	■■□□□ 1.06
ACACA-238	ENST00000616352	AGXT	P21549	392 aa		21.69	■■□□□ 1.06
ACACA-238	ENST00000616352	HNRNPF	P52597	415 aa	Known RBP	21.69	■■□□□ 1.06
ACACA-238	ENST00000616352	PDE7A	Q13946	482 aa		21.69	■■□□□ 1.06
ACACA-238	ENST00000616352	UBAP2L	Q14157	1087 aa	Known RBP	21.69	■■□□□ 1.06
ACACA-238	ENST00000616352	FAM198B	Q6UWH4	519 aa		21.69	■■□□□ 1.06
ACACA-238	ENST00000616352	C6orf15	Q6UXA7	325 aa	Predicted RBP	21.69	■■□□□ 1.06
ACACA-238	ENST00000616352	OVCH1	Q7RTY7	1134 aa		21.69	■■□□□ 1.06
ACACA-238	ENST00000616352	TMEM52	Q8NDY8	209 aa		21.69	■■□□□ 1.06
ACACA-238	ENST00000616352	OR9I1	Q8NGQ6	314 aa		21.69	■■□□□ 1.06
ACACA-238	ENST00000616352	NUDT8	Q8WV74	236 aa		21.69	■■□□□ 1.06
ACACA-238	ENST00000616352	UCN3	Q969E3	161 aa		21.69	■■□□□ 1.06
ACACA-238	ENST00000616352	GFM2	Q969S9	779 aa	Known RBP	21.69	■■□□□ 1.06
ACACA-238	ENST00000616352	TBC1D20	Q96BZ9	403 aa		21.69	■■□□□ 1.06
ACACA-238	ENST00000616352	OR1F2P	Q96R84	312 aa		21.69	■■□□□ 1.06
ACACA-238	ENST00000616352	FAIM2	Q9BWQ8	316 aa		21.69	■■□□□ 1.06
ACACA-238	ENST00000616352	DPY30	Q9C005	99 aa		21.69	■■□□□ 1.06
ACACA-238	ENST00000616352	TGIF2	Q9GZN2	237 aa		21.69	■■□□□ 1.06
ACACA-238	ENST00000616352	MKKS	Q9NPJ1	570 aa	Predicted RBP	21.69	■■□□□ 1.06
ACACA-238	ENST00000616352	PRDM9	Q9NQV7	894 aa		21.69	■■□□□ 1.06
ACACA-238	ENST00000616352	MRGBP	Q9NV56	204 aa		21.69	■■□□□ 1.06
ACACA-238	ENST00000616352	CTSF	Q9UBX1	484 aa		21.69	■■□□□ 1.06
ACACA-238	ENST00000616352	ACSL6	Q9UKU0	697 aa		21.69	■■□□□ 1.06
ACACA-238	ENST00000616352	FREM2	Q5SZK8	3169 aa		21.68	■■□□□ 1.06
ACACA-238	ENST00000616352	CEP295	Q9C0D2	2601 aa		21.68	■■□□□ 1.06
ACACA-238	ENST00000616352	C1orf226	A1L170	272 aa		21.68	■■□□□ 1.06
ACACA-238	ENST00000616352	IQCJ-SCHIP1	C9J366	451 aa	Predicted RBP	21.68	■■□□□ 1.06
ACACA-238	ENST00000616352	SLC22A3	O75751	556 aa		21.68	■■□□□ 1.06
ACACA-238	ENST00000616352	IL10	P22301	178 aa		21.68	■■□□□ 1.06
ACACA-238	ENST00000616352	CD82	P27701	267 aa		21.68	■■□□□ 1.06
ACACA-238	ENST00000616352	IL12A	P29459	219 aa		21.68	■■□□□ 1.06
ACACA-238	ENST00000616352	ZFP36L2	P47974	494 aa	Known RBP	21.68	■■□□□ 1.06
ACACA-238	ENST00000616352	MRPL14	Q6P1L8	145 aa	Known RBP	21.68	■■□□□ 1.06
ACACA-238	ENST00000616352	PAOX	Q6QHF9	649 aa		21.68	■■□□□ 1.06
ACACA-238	ENST00000616352	ZC3H7A	Q8IWR0	971 aa	Known RBP	21.68	■■□□□ 1.06
ACACA-238	ENST00000616352	MR1	Q95460	341 aa		21.68	■■□□□ 1.06
ACACA-238	ENST00000616352	FKBP10	Q96AY3	582 aa		21.68	■■□□□ 1.06
ACACA-238	ENST00000616352	RBCK1	Q9BYM8	510 aa		21.68	■■□□□ 1.06
ACACA-238	ENST00000616352	CHST8	Q9H2A9	424 aa		21.68	■■□□□ 1.06
ACACA-238	ENST00000616352	SLC26A1	Q9H2B4	701 aa		21.68	■■□□□ 1.06
ACACA-238	ENST00000616352	REEP4	Q9H6H4	257 aa		21.68	■■□□□ 1.06
ACACA-238	ENST00000616352	IFT80	Q9P2H3	777 aa	Predicted RBP	21.68	■■□□□ 1.06
ACACA-238	ENST00000616352	ZNF282	Q9UDV7	671 aa	Predicted RBP	21.68	■■□□□ 1.06
ACACA-238	ENST00000616352	TRABD2B	A6NFA1	517 aa		21.67	■■□□□ 1.06
ACACA-238	ENST00000616352	PSMD12	O00232	456 aa	Predicted RBP	21.67	■■□□□ 1.06
ACACA-238	ENST00000616352	SCAMP2	O15127	329 aa	Known RBP	21.67	■■□□□ 1.06
ACACA-238	ENST00000616352	PGRMC2	O15173	223 aa		21.67	■■□□□ 1.06
ACACA-238	ENST00000616352	AKAP10	O43572	662 aa		21.67	■■□□□ 1.06
ACACA-238	ENST00000616352	BRINP1	O60477	761 aa		21.67	■■□□□ 1.06
ACACA-238	ENST00000616352	BMP10	O95393	424 aa		21.67	■■□□□ 1.06
ACACA-238	ENST00000616352	ALB	P02768	609 aa		21.67	■■□□□ 1.06
ACACA-238	ENST00000616352	FH	P07954	510 aa		21.67	■■□□□ 1.06
ACACA-238	ENST00000616352	ATXN8OS	P0DMR3	200 aa		21.67	■■□□□ 1.06
ACACA-238	ENST00000616352	TLX1	P31314	330 aa	Predicted RBP	21.67	■■□□□ 1.06
ACACA-238	ENST00000616352	UGT8	Q16880	541 aa		21.67	■■□□□ 1.06
ACACA-238	ENST00000616352	FAM199X	Q6PEV8	388 aa	Predicted RBP	21.67	■■□□□ 1.06
ACACA-238	ENST00000616352	MTERF3	Q96E29	417 aa		21.67	■■□□□ 1.06
ACACA-238	ENST00000616352	ZNF764	Q96H86	408 aa	Predicted RBP	21.67	■■□□□ 1.06
ACACA-238	ENST00000616352	CLMP	Q9H6B4	373 aa		21.67	■■□□□ 1.06
ACACA-238	ENST00000616352	RPF2	Q9H7B2	306 aa	Known RBP	21.67	■■□□□ 1.06
ACACA-238	ENST00000616352	LANCL2	Q9NS86	450 aa		21.67	■■□□□ 1.06
ACACA-238	ENST00000616352	TMEM45A	Q9NWC5	275 aa		21.67	■■□□□ 1.06
ACACA-238	ENST00000616352	EHD3	Q9NZN3	535 aa		21.67	■■□□□ 1.06
ACACA-238	ENST00000616352	ATP6V1H	Q9UI12	483 aa		21.67	■■□□□ 1.06
ACACA-238	ENST00000616352	CES1P1	Q9UKY3	287 aa		21.67	■■□□□ 1.06
ACACA-238	ENST00000616352	PADI1	Q9ULC6	663 aa		21.67	■■□□□ 1.06
ACACA-238	ENST00000616352	MAPRE3	Q9UPY8	281 aa		21.67	■■□□□ 1.06
ACACA-238	ENST00000616352	GLOD5	A6NK44	160 aa		21.66	■■□□□ 1.06

Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms