RNA–Protein interactions for RNA: ENST00000615671.1

GABPB1-212, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

Gene GABPB1, Length 6,266 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-212ENST00000615671 HSPA12BQ96MM6 686 aa17.98■□□□□ 0.47
GABPB1-212ENST00000615671 TMEM185BQ9H7F4 350 aa17.98■□□□□ 0.47
GABPB1-212ENST00000615671 FBRSL1Q9HCM7 1045 aaKnown RBP17.98■□□□□ 0.47
GABPB1-212ENST00000615671 STARD5Q9NSY2 213 aa17.98■□□□□ 0.47
GABPB1-212ENST00000615671 NUDT15Q9NV35 164 aa17.98■□□□□ 0.47
GABPB1-212ENST00000615671 STC1P52823 247 aa17.98■□□□□ 0.47
GABPB1-212ENST00000615671 FOXR2Q6PJQ5 311 aa17.98■□□□□ 0.47
GABPB1-212ENST00000615671 F2RL3Q96RI0 385 aa17.98■□□□□ 0.47
GABPB1-212ENST00000615671 TMEM109Q9BVC6 243 aa17.98■□□□□ 0.47
GABPB1-212ENST00000615671 PCDHGA10Q9Y5H3 936 aa17.98■□□□□ 0.47
GABPB1-212ENST00000615671 IQCF3P0C7M6 154 aa17.98■□□□□ 0.47
GABPB1-212ENST00000615671 DEFB133Q30KQ1 61 aa17.98■□□□□ 0.47
GABPB1-212ENST00000615671 TAMM41Q96BW9 452 aa17.98■□□□□ 0.47
GABPB1-212ENST00000615671 TMEM80Q96HE8 168 aa17.98■□□□□ 0.47
GABPB1-212ENST00000615671 ITPAQ9BY32 194 aa17.98■□□□□ 0.47
GABPB1-212ENST00000615671 SLC7A11Q9UPY5 501 aa17.98■□□□□ 0.47
GABPB1-212ENST00000615671 PTGDR2Q9Y5Y4 395 aa17.98■□□□□ 0.47
GABPB1-212ENST00000615671 P04436 131 aa17.97■□□□□ 0.47
GABPB1-212ENST00000615671 POU3F4P49335 361 aa17.97■□□□□ 0.47
GABPB1-212ENST00000615671 RPL19P84098 196 aaKnown RBP17.97■□□□□ 0.47
GABPB1-212ENST00000615671 DLX2Q07687 328 aaPredicted RBP17.97■□□□□ 0.47
GABPB1-212ENST00000615671 ZNF763Q0D2J5 394 aa17.97■□□□□ 0.47
GABPB1-212ENST00000615671 ATAD3CQ5T2N8 411 aa17.97■□□□□ 0.47
GABPB1-212ENST00000615671 GPRIN1Q7Z2K8 1008 aa17.97■□□□□ 0.47
GABPB1-212ENST00000615671 SLC44A3Q8N4M1 653 aa17.97■□□□□ 0.47
GABPB1-212ENST00000615671 CPNE2Q96FN4 548 aaPredicted RBP17.97■□□□□ 0.47
GABPB1-212ENST00000615671 NSUN5Q96P11 429 aaKnown RBP17.97■□□□□ 0.47
GABPB1-212ENST00000615671 TIGARQ9NQ88 270 aa17.97■□□□□ 0.47
GABPB1-212ENST00000615671 MS4A12Q9NXJ0 267 aa17.97■□□□□ 0.47
GABPB1-212ENST00000615671 ACSL5Q9ULC5 683 aa17.97■□□□□ 0.47
GABPB1-212ENST00000615671 CCDC163A0A0D9SF12 145 aa17.97■□□□□ 0.47
GABPB1-212ENST00000615671 ATE1O95260 518 aa17.97■□□□□ 0.47
GABPB1-212ENST00000615671 SRPRAP08240 638 aaKnown RBP17.97■□□□□ 0.47
GABPB1-212ENST00000615671 ACRV1P26436 265 aa17.97■□□□□ 0.47
GABPB1-212ENST00000615671 PHLPP1O60346 1717 aa17.97■□□□□ 0.47
GABPB1-212ENST00000615671 CKMT1AP12532 417 aa17.97■□□□□ 0.47
GABPB1-212ENST00000615671 CD72P21854 359 aa17.97■□□□□ 0.47
GABPB1-212ENST00000615671 ADAM15Q13444 863 aa17.97■□□□□ 0.47
GABPB1-212ENST00000615671 ANKDD1AQ495B1 522 aa17.97■□□□□ 0.47
GABPB1-212ENST00000615671 TRIM73Q86UV7 250 aa17.97■□□□□ 0.47
GABPB1-212ENST00000615671 RPLP0P6Q8NHW5 317 aa17.97■□□□□ 0.47
GABPB1-212ENST00000615671 CD300LFQ8TDQ1 290 aa17.97■□□□□ 0.47
GABPB1-212ENST00000615671 MAP3K3Q99759 626 aa17.97■□□□□ 0.47
GABPB1-212ENST00000615671 SLC29A3Q9BZD2 475 aa17.97■□□□□ 0.47
GABPB1-212ENST00000615671 ZIM2Q9NZV7 527 aa17.97■□□□□ 0.47
GABPB1-212ENST00000615671 M0R129 80 aa17.97■□□□□ 0.47
GABPB1-212ENST00000615671 EBLN1P0CF75 366 aa17.97■□□□□ 0.47
GABPB1-212ENST00000615671 RBM34P42696 430 aaKnown RBP17.97■□□□□ 0.47
GABPB1-212ENST00000615671 DHCR24Q15392 516 aa17.97■□□□□ 0.47
GABPB1-212ENST00000615671 SLC39A5Q6ZMH5 540 aa17.97■□□□□ 0.47
GABPB1-212ENST00000615671 ZNF709Q8N972 641 aa17.97■□□□□ 0.47
GABPB1-212ENST00000615671 FAM3CQ92520 227 aa17.97■□□□□ 0.47
GABPB1-212ENST00000615671 CPEB1Q9BZB8 566 aaKnown RBP17.97■□□□□ 0.47
GABPB1-212ENST00000615671 MLXQ9UH92 298 aa17.97■□□□□ 0.47
GABPB1-212ENST00000615671 TMED5Q9Y3A6 229 aa17.97■□□□□ 0.47
GABPB1-212ENST00000615671 MRC1P22897 1456 aa17.97■□□□□ 0.47
GABPB1-212ENST00000615671 XPNPEP2O43895 674 aa17.97■□□□□ 0.47
GABPB1-212ENST00000615671 PEPDP12955 493 aa17.97■□□□□ 0.47
GABPB1-212ENST00000615671 TMCO6Q96DC7 493 aa17.97■□□□□ 0.47
GABPB1-212ENST00000615671 AURKBQ96GD4 344 aaPredicted RBP17.97■□□□□ 0.47
GABPB1-212ENST00000615671 TSGA13Q96PP4 275 aa17.97■□□□□ 0.47
GABPB1-212ENST00000615671 SLC22A4Q9H015 551 aa17.97■□□□□ 0.47
GABPB1-212ENST00000615671 MRM3Q9HC36 420 aaKnown RBP17.97■□□□□ 0.47
GABPB1-212ENST00000615671 RARRES3Q9UL19 164 aa17.97■□□□□ 0.47
GABPB1-212ENST00000615671 DISC1C4P0D8 188 aa17.96■□□□□ 0.47
GABPB1-212ENST00000615671 RTCAO00442 366 aaKnown RBP17.96■□□□□ 0.47
GABPB1-212ENST00000615671 TPTEP56180 551 aa17.96■□□□□ 0.47
GABPB1-212ENST00000615671 TBPL1P62380 186 aa17.96■□□□□ 0.47
GABPB1-212ENST00000615671 ROR2Q01974 943 aaKnown RBP17.96■□□□□ 0.47
GABPB1-212ENST00000615671 TDRPQ86YL5 185 aa17.96■□□□□ 0.47
GABPB1-212ENST00000615671 GLIS1Q8NBF1 620 aa17.96■□□□□ 0.47
GABPB1-212ENST00000615671 FBXL20Q96IG2 436 aa17.96■□□□□ 0.47
GABPB1-212ENST00000615671 G6PC3Q9BUM1 346 aa17.96■□□□□ 0.47
GABPB1-212ENST00000615671 REEP4Q9H6H4 257 aa17.96■□□□□ 0.47
GABPB1-212ENST00000615671 KCNE1P15382 129 aa17.96■□□□□ 0.47
GABPB1-212ENST00000615671 HHEXQ03014 270 aa17.96■□□□□ 0.47
GABPB1-212ENST00000615671 IER5LQ5T953 404 aa17.96■□□□□ 0.47
GABPB1-212ENST00000615671 ASB15Q8WXK1 588 aa17.96■□□□□ 0.47
GABPB1-212ENST00000615671 TMEM234Q8WY98 164 aa17.96■□□□□ 0.47
GABPB1-212ENST00000615671 FCGR1BQ92637 280 aa17.96■□□□□ 0.47
GABPB1-212ENST00000615671 GLYATL1Q969I3 302 aa17.96■□□□□ 0.47
GABPB1-212ENST00000615671 NTPCRQ9BSD7 190 aaKnown RBP17.96■□□□□ 0.47
GABPB1-212ENST00000615671 DPH7Q9BTV6 452 aa17.96■□□□□ 0.47
GABPB1-212ENST00000615671 KCNK12Q9HB15 430 aa17.96■□□□□ 0.47
GABPB1-212ENST00000615671 GGT3PA6NGU5 568 aa17.96■□□□□ 0.47
GABPB1-212ENST00000615671 UBE2NP61088 152 aaKnown RBP17.96■□□□□ 0.47
GABPB1-212ENST00000615671 ZNF852Q6ZMS4 543 aa17.96■□□□□ 0.47
GABPB1-212ENST00000615671 OR5J2Q8NH18 312 aa17.96■□□□□ 0.47
GABPB1-212ENST00000615671 PRODH2Q9UF12 536 aa17.96■□□□□ 0.47
GABPB1-212ENST00000615671 UQCRC2P22695 453 aa17.96■□□□□ 0.47
GABPB1-212ENST00000615671 NSDHLQ15738 373 aa17.96■□□□□ 0.47
GABPB1-212ENST00000615671 STK11Q15831 433 aa17.96■□□□□ 0.47
GABPB1-212ENST00000615671 PRR22Q8IZ63 422 aa17.96■□□□□ 0.47
GABPB1-212ENST00000615671 DKK3Q9UBP4 350 aa17.96■□□□□ 0.47
GABPB1-212ENST00000615671 TGM5O43548 720 aa17.96■□□□□ 0.46
GABPB1-212ENST00000615671 GSK3BP49841 420 aa17.96■□□□□ 0.46
GABPB1-212ENST00000615671 C18orf21Q32NC0 220 aaPredicted RBP17.96■□□□□ 0.46
GABPB1-212ENST00000615671 SH3D19Q5HYK7 790 aa17.96■□□□□ 0.46
GABPB1-212ENST00000615671 GTF2IRD2BQ6EKJ0 949 aa17.96■□□□□ 0.46
GABPB1-212ENST00000615671 GTF2IRD2Q86UP8 949 aa17.96■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms