RNA–Protein interactions for RNA: ENST00000613856.4

SLIRP-212, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SLIRP, Length 420 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-212ENST00000613856 CCNYL2Q5T2Q4 361 aa10.83□□□□□ -0.68
SLIRP-212ENST00000613856 GARNL3Q5VVW2 1013 aa10.83□□□□□ -0.68
SLIRP-212ENST00000613856 MRM1Q6IN84 353 aaKnown RBP10.83□□□□□ -0.68
SLIRP-212ENST00000613856 FAM71E1Q6IPT2 247 aa10.83□□□□□ -0.68
SLIRP-212ENST00000613856 CCDC81Q6ZN84 652 aa10.83□□□□□ -0.68
SLIRP-212ENST00000613856 MSANTD1Q6ZTZ1 278 aa10.83□□□□□ -0.68
SLIRP-212ENST00000613856 CAMKMTQ7Z624 323 aa10.83□□□□□ -0.68
SLIRP-212ENST00000613856 POU5F2Q8N7G0 328 aa10.83□□□□□ -0.68
SLIRP-212ENST00000613856 CLHC1Q8NHS4 586 aa10.83□□□□□ -0.68
SLIRP-212ENST00000613856 C16orf78Q8WTQ4 265 aa10.83□□□□□ -0.68
SLIRP-212ENST00000613856 MTERF3Q96E29 417 aa10.83□□□□□ -0.68
SLIRP-212ENST00000613856 SPDL1Q96EA4 605 aa10.83□□□□□ -0.68
SLIRP-212ENST00000613856 MACROD1Q9BQ69 325 aa10.83□□□□□ -0.68
SLIRP-212ENST00000613856 SORBS1Q9BX66 1292 aaKnown RBP10.83□□□□□ -0.68
SLIRP-212ENST00000613856 COPS7BQ9H9Q2 264 aaPredicted RBP10.83□□□□□ -0.68
SLIRP-212ENST00000613856 LYARQ9NX58 379 aaKnown RBP10.83□□□□□ -0.68
SLIRP-212ENST00000613856 BAIAP2L1Q9UHR4 511 aa10.83□□□□□ -0.68
SLIRP-212ENST00000613856 SCN3AQ9NY46 2000 aa10.83□□□□□ -0.68
SLIRP-212ENST00000613856 NBPF19A0A087WUL8 3843 aa10.83□□□□□ -0.68
SLIRP-212ENST00000613856 A0A1W2PP18 115 aa10.82□□□□□ -0.68
SLIRP-212ENST00000613856 H3BMH7 237 aa10.82□□□□□ -0.68
SLIRP-212ENST00000613856 SCAMP2O15127 329 aaKnown RBP10.82□□□□□ -0.68
SLIRP-212ENST00000613856 CFLARO15519 480 aa10.82□□□□□ -0.68
SLIRP-212ENST00000613856 TMPRSS11DO60235 418 aa10.82□□□□□ -0.68
SLIRP-212ENST00000613856 GUCY1B2O75343 617 aa10.82□□□□□ -0.68
SLIRP-212ENST00000613856 EIF2S1P05198 315 aaKnown RBP10.82□□□□□ -0.68
SLIRP-212ENST00000613856 IL6P05231 212 aa10.82□□□□□ -0.68
SLIRP-212ENST00000613856 CD1EP15812 388 aa10.82□□□□□ -0.68
SLIRP-212ENST00000613856 CAPN3P20807 821 aa10.82□□□□□ -0.68
SLIRP-212ENST00000613856 GCGRP47871 477 aa10.82□□□□□ -0.68
SLIRP-212ENST00000613856 SEPHS1P49903 392 aa10.82□□□□□ -0.68
SLIRP-212ENST00000613856 NCALDP61601 193 aa10.82□□□□□ -0.68
SLIRP-212ENST00000613856 SKP1P63208 163 aa10.82□□□□□ -0.68
SLIRP-212ENST00000613856 ACY1Q03154 408 aa10.82□□□□□ -0.68
SLIRP-212ENST00000613856 ZFP36L1Q07352 338 aaKnown RBP10.82□□□□□ -0.68
SLIRP-212ENST00000613856 KLC1Q07866 573 aa10.82□□□□□ -0.68
SLIRP-212ENST00000613856 FAM53BQ14153 422 aa10.82□□□□□ -0.68
SLIRP-212ENST00000613856 SPIDRQ14159 915 aa10.82□□□□□ -0.68
SLIRP-212ENST00000613856 NDUFA9Q16795 377 aa10.82□□□□□ -0.68
SLIRP-212ENST00000613856 SNAP47Q5SQN1 464 aa10.82□□□□□ -0.68
SLIRP-212ENST00000613856 WASHC2DQ5SRD0 308 aa10.82□□□□□ -0.68
SLIRP-212ENST00000613856 R3HCC1LQ7Z5L2 792 aaKnown RBP10.82□□□□□ -0.68
SLIRP-212ENST00000613856 TMEM132CQ8N3T6 1108 aa10.82□□□□□ -0.68
SLIRP-212ENST00000613856 KRTCAP2Q8N6L1 136 aa10.82□□□□□ -0.68
SLIRP-212ENST00000613856 ACOT4Q8N9L9 421 aa10.82□□□□□ -0.68
SLIRP-212ENST00000613856 OR8K5Q8NH50 307 aa10.82□□□□□ -0.68
SLIRP-212ENST00000613856 ZCCHC10Q8TBK6 192 aa10.82□□□□□ -0.68
SLIRP-212ENST00000613856 SLC7A6OSQ96CW6 309 aaPredicted RBP10.82□□□□□ -0.68
SLIRP-212ENST00000613856 SLC45A3Q96JT2 553 aa10.82□□□□□ -0.68
SLIRP-212ENST00000613856 EGLN2Q96KS0 407 aa10.82□□□□□ -0.68
SLIRP-212ENST00000613856 CCDC74BQ96LY2 380 aa10.82□□□□□ -0.68
SLIRP-212ENST00000613856 SERINC2Q96SA4 455 aa10.82□□□□□ -0.68
SLIRP-212ENST00000613856 FAM117AQ9C073 453 aa10.82□□□□□ -0.68
SLIRP-212ENST00000613856 C1orf21Q9H246 121 aa10.82□□□□□ -0.68
SLIRP-212ENST00000613856 REEP4Q9H6H4 257 aa10.82□□□□□ -0.68
SLIRP-212ENST00000613856 SYNDIG1Q9H7V2 258 aa10.82□□□□□ -0.68
SLIRP-212ENST00000613856 ACTR5Q9H9F9 607 aaPredicted RBP10.82□□□□□ -0.68
SLIRP-212ENST00000613856 FANCEQ9HB96 536 aa10.82□□□□□ -0.68
SLIRP-212ENST00000613856 PRDM9Q9NQV7 894 aa10.82□□□□□ -0.68
SLIRP-212ENST00000613856 STARD5Q9NSY2 213 aa10.82□□□□□ -0.68
SLIRP-212ENST00000613856 SIDT1Q9NXL6 827 aaKnown RBP10.82□□□□□ -0.68
SLIRP-212ENST00000613856 ATP6V1HQ9UI12 483 aa10.82□□□□□ -0.68
SLIRP-212ENST00000613856 NDUFAF1Q9Y375 327 aa10.82□□□□□ -0.68
SLIRP-212ENST00000613856 FLNCQ14315 2725 aa10.82□□□□□ -0.68
SLIRP-212ENST00000613856 TEX15Q9BXT5 2789 aa10.82□□□□□ -0.68
SLIRP-212ENST00000613856 A0A0G2JN53 185 aa10.81□□□□□ -0.68
SLIRP-212ENST00000613856 LOC100653049A0A140TA62 436 aa10.81□□□□□ -0.68
SLIRP-212ENST00000613856 CCDC154A6NI56 674 aa10.81□□□□□ -0.68
SLIRP-212ENST00000613856 AGRPO00253 132 aa10.81□□□□□ -0.68
SLIRP-212ENST00000613856 FBP2O00757 339 aa10.81□□□□□ -0.68
SLIRP-212ENST00000613856 ANGPT2O15123 496 aa10.81□□□□□ -0.68
SLIRP-212ENST00000613856 GALR3O60755 368 aaPredicted RBP10.81□□□□□ -0.68
SLIRP-212ENST00000613856 KRT34O76011 436 aa10.81□□□□□ -0.68
SLIRP-212ENST00000613856 TNFSF15O95150 251 aa10.81□□□□□ -0.68
SLIRP-212ENST00000613856 GBAP04062 536 aa10.81□□□□□ -0.68
SLIRP-212ENST00000613856 PGRP06401 933 aa10.81□□□□□ -0.68
SLIRP-212ENST00000613856 IL3P08700 152 aa10.81□□□□□ -0.68
SLIRP-212ENST00000613856 FURINP09958 794 aa10.81□□□□□ -0.68
SLIRP-212ENST00000613856 FAM58BPP0C7Q3 252 aa10.81□□□□□ -0.68
SLIRP-212ENST00000613856 DDX5P17844 614 aaKnown RBP10.81□□□□□ -0.68
SLIRP-212ENST00000613856 WT1P19544 449 aaPredicted RBP10.81□□□□□ -0.68
SLIRP-212ENST00000613856 CERS1P27544 350 aa10.81□□□□□ -0.68
SLIRP-212ENST00000613856 TAS2R50P59544 299 aa10.81□□□□□ -0.68
SLIRP-212ENST00000613856 RAB8AP61006 207 aa10.81□□□□□ -0.68
SLIRP-212ENST00000613856 BTN3A2P78410 334 aa10.81□□□□□ -0.68
SLIRP-212ENST00000613856 SRSF11Q05519 484 aaKnown RBP10.81□□□□□ -0.68
SLIRP-212ENST00000613856 KCNAB1Q14722 419 aa10.81□□□□□ -0.68
SLIRP-212ENST00000613856 GRM7Q14831 915 aa10.81□□□□□ -0.68
SLIRP-212ENST00000613856 SLC9A5Q14940 896 aa10.81□□□□□ -0.68
SLIRP-212ENST00000613856 HEPACAMQ14CZ8 416 aa10.81□□□□□ -0.68
SLIRP-212ENST00000613856 UGT8Q16880 541 aa10.81□□□□□ -0.68
SLIRP-212ENST00000613856 FAM174BQ3ZCQ3 159 aa10.81□□□□□ -0.68
SLIRP-212ENST00000613856 TIGD2Q4W5G0 525 aa10.81□□□□□ -0.68
SLIRP-212ENST00000613856 SPANXN4Q5MJ08 99 aa10.81□□□□□ -0.68
SLIRP-212ENST00000613856 YOD1Q5VVQ6 348 aaPredicted RBP10.81□□□□□ -0.68
SLIRP-212ENST00000613856 REP15Q6BDI9 236 aa10.81□□□□□ -0.68
SLIRP-212ENST00000613856 HIST2H2BCQ6DN03 193 aa10.81□□□□□ -0.68
SLIRP-212ENST00000613856 IGF2-ASQ6U949 168 aa10.81□□□□□ -0.68
SLIRP-212ENST00000613856 HACD2Q6Y1H2 254 aa10.81□□□□□ -0.68
SLIRP-212ENST00000613856 DPP10Q8N608 796 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms