RNA–Protein interactions for RNA: ENST00000611963.4

TARDBP-213, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 739 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-213ENST00000611963 RABL3Q5HYI8 236 aa7.67□□□□□ -1.18
TARDBP-213ENST00000611963 SAMD4BQ5PRF9 694 aaKnown RBP7.67□□□□□ -1.18
TARDBP-213ENST00000611963 C1orf146Q5VVC0 180 aa7.67□□□□□ -1.18
TARDBP-213ENST00000611963 MRM1Q6IN84 353 aaKnown RBP7.67□□□□□ -1.18
TARDBP-213ENST00000611963 FAM180BQ6P0A1 224 aa7.67□□□□□ -1.18
TARDBP-213ENST00000611963 CYB5D1Q6P9G0 228 aa7.67□□□□□ -1.18
TARDBP-213ENST00000611963 MSANTD1Q6ZTZ1 278 aa7.67□□□□□ -1.18
TARDBP-213ENST00000611963 PRSS41Q7RTY9 318 aa7.67□□□□□ -1.18
TARDBP-213ENST00000611963 CAMKMTQ7Z624 323 aa7.67□□□□□ -1.18
TARDBP-213ENST00000611963 GPR180Q86V85 440 aa7.67□□□□□ -1.18
TARDBP-213ENST00000611963 TICAM1Q8IUC6 712 aa7.67□□□□□ -1.18
TARDBP-213ENST00000611963 MSRB3Q8IXL7 192 aa7.67□□□□□ -1.18
TARDBP-213ENST00000611963 SLC15A3Q8IY34 581 aa7.67□□□□□ -1.18
TARDBP-213ENST00000611963 C10orf67Q8IYJ2 551 aa7.67□□□□□ -1.18
TARDBP-213ENST00000611963 SHISA5Q8N114 240 aa7.67□□□□□ -1.18
TARDBP-213ENST00000611963 DNAJC22Q8N4W6 341 aa7.67□□□□□ -1.18
TARDBP-213ENST00000611963 DTWD1Q8N5C7 304 aa7.67□□□□□ -1.18
TARDBP-213ENST00000611963 ACOT4Q8N9L9 421 aa7.67□□□□□ -1.18
TARDBP-213ENST00000611963 FAM47BQ8NA70 645 aa7.67□□□□□ -1.18
TARDBP-213ENST00000611963 OR8J2Q8NGG1 315 aa7.67□□□□□ -1.18
TARDBP-213ENST00000611963 STARD8Q92502 1023 aa7.67□□□□□ -1.18
TARDBP-213ENST00000611963 PPCDCQ96CD2 204 aa7.67□□□□□ -1.18
TARDBP-213ENST00000611963 COQ8BQ96D53 544 aa7.67□□□□□ -1.18
TARDBP-213ENST00000611963 AURKBQ96GD4 344 aaPredicted RBP7.67□□□□□ -1.18
TARDBP-213ENST00000611963 ZDHHC12Q96GR4 267 aa7.67□□□□□ -1.18
TARDBP-213ENST00000611963 ITCHQ96J02 903 aa7.67□□□□□ -1.18
TARDBP-213ENST00000611963 CNTNAP3BQ96NU0 1288 aa7.67□□□□□ -1.18
TARDBP-213ENST00000611963 HOPXQ9BPY8 73 aaPredicted RBP7.67□□□□□ -1.18
TARDBP-213ENST00000611963 MAPKAP1Q9BPZ7 522 aa7.67□□□□□ -1.18
TARDBP-213ENST00000611963 TBCDQ9BTW9 1192 aa7.67□□□□□ -1.18
TARDBP-213ENST00000611963 CNTNAP3Q9BZ76 1288 aa7.67□□□□□ -1.18
TARDBP-213ENST00000611963 PAIP1Q9H074 479 aaKnown RBP7.67□□□□□ -1.18
TARDBP-213ENST00000611963 SYNDIG1Q9H7V2 258 aa7.67□□□□□ -1.18
TARDBP-213ENST00000611963 RMND5AQ9H871 391 aa7.67□□□□□ -1.18
TARDBP-213ENST00000611963 COPS7BQ9H9Q2 264 aaPredicted RBP7.67□□□□□ -1.18
TARDBP-213ENST00000611963 SPAG4Q9NPE6 437 aa7.67□□□□□ -1.18
TARDBP-213ENST00000611963 FAM120CQ9NX05 1096 aaKnown RBP7.67□□□□□ -1.18
TARDBP-213ENST00000611963 SLC25A37Q9NYZ2 338 aa7.67□□□□□ -1.18
TARDBP-213ENST00000611963 VAPAQ9P0L0 249 aa7.67□□□□□ -1.18
TARDBP-213ENST00000611963 EPHA6Q9UF33 1036 aa7.67□□□□□ -1.18
TARDBP-213ENST00000611963 FBXW2Q9UKT8 454 aa7.67□□□□□ -1.18
TARDBP-213ENST00000611963 ATXN7L1Q9ULK2 861 aaPredicted RBP7.67□□□□□ -1.18
TARDBP-213ENST00000611963 USP22Q9UPT9 525 aa7.67□□□□□ -1.18
TARDBP-213ENST00000611963 MAPRE3Q9UPY8 281 aa7.67□□□□□ -1.18
TARDBP-213ENST00000611963 MAN2B2Q9Y2E5 1009 aa7.67□□□□□ -1.18
TARDBP-213ENST00000611963 PCDHA9Q9Y5H5 950 aa7.67□□□□□ -1.18
TARDBP-213ENST00000611963 TRBV5-3A0A0A0MS03 114 aa7.66□□□□□ -1.18
TARDBP-213ENST00000611963 SPAARA0A1B0GVQ0 90 aa7.66□□□□□ -1.18
TARDBP-213ENST00000611963 A0A1W2PR48 441 aa7.66□□□□□ -1.18
TARDBP-213ENST00000611963 PRORSD1PA6NEY8 169 aa7.66□□□□□ -1.18
TARDBP-213ENST00000611963 GLOD5A6NK44 160 aa7.66□□□□□ -1.18
TARDBP-213ENST00000611963 WASHC1A8K0Z3 465 aa7.66□□□□□ -1.18
TARDBP-213ENST00000611963 A8MU76 341 aa7.66□□□□□ -1.18
TARDBP-213ENST00000611963 RFXANKO14593 260 aa7.66□□□□□ -1.18
TARDBP-213ENST00000611963 DNAJA2O60884 412 aa7.66□□□□□ -1.18
TARDBP-213ENST00000611963 SCN2BO60939 215 aa7.66□□□□□ -1.18
TARDBP-213ENST00000611963 DNAJB6O75190 326 aa7.66□□□□□ -1.18
TARDBP-213ENST00000611963 ENTPD5O75356 428 aa7.66□□□□□ -1.18
TARDBP-213ENST00000611963 MED26O95402 600 aa7.66□□□□□ -1.18
TARDBP-213ENST00000611963 AIFM1O95831 613 aa7.66□□□□□ -1.18
TARDBP-213ENST00000611963 C1QCP02747 245 aa7.66□□□□□ -1.18
TARDBP-213ENST00000611963 SMIM10L1P0DMW3 83 aa7.66□□□□□ -1.18
TARDBP-213ENST00000611963 HOXB9P17482 250 aaPredicted RBP7.66□□□□□ -1.18
TARDBP-213ENST00000611963 ALOX12P18054 663 aa7.66□□□□□ -1.18
TARDBP-213ENST00000611963 IL1RNP18510 177 aa7.66□□□□□ -1.18
TARDBP-213ENST00000611963 DDCP20711 480 aa7.66□□□□□ -1.18
TARDBP-213ENST00000611963 ME2P23368 584 aa7.66□□□□□ -1.18
TARDBP-213ENST00000611963 PTPN6P29350 595 aa7.66□□□□□ -1.18
TARDBP-213ENST00000611963 SOX11P35716 441 aa7.66□□□□□ -1.18
TARDBP-213ENST00000611963 GABRA4P48169 554 aa7.66□□□□□ -1.18
TARDBP-213ENST00000611963 TRA2BP62995 288 aaKnown RBP7.66□□□□□ -1.18
TARDBP-213ENST00000611963 OLR1P78380 273 aa7.66□□□□□ -1.18
TARDBP-213ENST00000611963 GPLD1P80108 840 aa7.66□□□□□ -1.18
TARDBP-213ENST00000611963 SLC9A5Q14940 896 aa7.66□□□□□ -1.18
TARDBP-213ENST00000611963 MPEG1Q2M385 716 aa7.66□□□□□ -1.18
TARDBP-213ENST00000611963 PRTGQ2VWP7 1150 aa7.66□□□□□ -1.18
TARDBP-213ENST00000611963 GLIPR1L2Q4G1C9 344 aa7.66□□□□□ -1.18
TARDBP-213ENST00000611963 DEFB134Q4QY38 66 aa7.66□□□□□ -1.18
TARDBP-213ENST00000611963 WASHC2DQ5SRD0 308 aa7.66□□□□□ -1.18
TARDBP-213ENST00000611963 ZNF787Q6DD87 383 aa7.66□□□□□ -1.18
TARDBP-213ENST00000611963 NANOGP8Q6NSW7 305 aa7.66□□□□□ -1.18
TARDBP-213ENST00000611963 TMEM214Q6NUQ4 689 aaKnown RBP7.66□□□□□ -1.18
TARDBP-213ENST00000611963 IKBIPQ70UQ0 350 aa7.66□□□□□ -1.18
TARDBP-213ENST00000611963 ABHD13Q7L211 337 aa7.66□□□□□ -1.18
TARDBP-213ENST00000611963 TMPRSS9Q7Z410 1059 aa7.66□□□□□ -1.18
TARDBP-213ENST00000611963 R3HCC1LQ7Z5L2 792 aaKnown RBP7.66□□□□□ -1.18
TARDBP-213ENST00000611963 NET1Q7Z628 596 aaPredicted RBP7.66□□□□□ -1.18
TARDBP-213ENST00000611963 PLXDC1Q8IUK5 500 aa7.66□□□□□ -1.18
TARDBP-213ENST00000611963 ZCCHC7Q8N3Z6 543 aaKnown RBP7.66□□□□□ -1.18
TARDBP-213ENST00000611963 FAM181AQ8N9Y4 354 aa7.66□□□□□ -1.18
TARDBP-213ENST00000611963 HIPK4Q8NE63 616 aa7.66□□□□□ -1.18
TARDBP-213ENST00000611963 SRFBP1Q8NEF9 429 aaKnown RBP7.66□□□□□ -1.18
TARDBP-213ENST00000611963 OR4A15Q8NGL6 344 aa7.66□□□□□ -1.18
TARDBP-213ENST00000611963 EXOSC8Q96B26 276 aaKnown RBP7.66□□□□□ -1.18
TARDBP-213ENST00000611963 TCTN2Q96GX1 697 aa7.66□□□□□ -1.18
TARDBP-213ENST00000611963 SMIM10Q96HG1 83 aa7.66□□□□□ -1.18
TARDBP-213ENST00000611963 CCDC115Q96NT0 180 aa7.66□□□□□ -1.18
TARDBP-213ENST00000611963 CD180Q99467 661 aa7.66□□□□□ -1.18
TARDBP-213ENST00000611963 PRPF18Q99633 342 aaKnown RBP7.66□□□□□ -1.18
TARDBP-213ENST00000611963 CPPED1Q9BRF8 314 aaPredicted RBP7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms