RNA–Protein interactions for RNA: ENST00000609477.5

HDDC2-209, Transcript of HD domain containing 2, humanhuman

TSL 4

Gene HDDC2, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-209ENST00000609477 CPN2P22792 545 aa13.39□□□□□ -0.27
HDDC2-209ENST00000609477 BSGP35613 385 aa13.39□□□□□ -0.27
HDDC2-209ENST00000609477 SOX11P35716 441 aa13.39□□□□□ -0.27
HDDC2-209ENST00000609477 NAGLUP54802 743 aa13.39□□□□□ -0.27
HDDC2-209ENST00000609477 ZNF844Q08AG5 666 aa13.39□□□□□ -0.27
HDDC2-209ENST00000609477 RAPSNQ13702 412 aa13.39□□□□□ -0.27
HDDC2-209ENST00000609477 KRT71Q3SY84 523 aa13.39□□□□□ -0.27
HDDC2-209ENST00000609477 MRM1Q6IN84 353 aaKnown RBP13.39□□□□□ -0.27
HDDC2-209ENST00000609477 CYP20A1Q6UW02 462 aa13.39□□□□□ -0.27
HDDC2-209ENST00000609477 LRIG3Q6UXM1 1119 aa13.39□□□□□ -0.27
HDDC2-209ENST00000609477 RPS27LQ71UM5 84 aaKnown RBP13.39□□□□□ -0.27
HDDC2-209ENST00000609477 SHISA5Q8N114 240 aa13.39□□□□□ -0.27
HDDC2-209ENST00000609477 LGI4Q8N135 537 aa13.39□□□□□ -0.27
HDDC2-209ENST00000609477 METTL6Q8TCB7 284 aa13.39□□□□□ -0.27
HDDC2-209ENST00000609477 SREK1Q8WXA9 508 aaKnown RBP13.39□□□□□ -0.27
HDDC2-209ENST00000609477 TSLPQ969D9 159 aa13.39□□□□□ -0.27
HDDC2-209ENST00000609477 MAPKAP1Q9BPZ7 522 aa13.39□□□□□ -0.27
HDDC2-209ENST00000609477 ZNF717Q9BY31 904 aaPredicted RBP13.39□□□□□ -0.27
HDDC2-209ENST00000609477 RNF32Q9H0A6 362 aa13.39□□□□□ -0.27
HDDC2-209ENST00000609477 GSTO2Q9H4Y5 243 aa13.39□□□□□ -0.27
HDDC2-209ENST00000609477 SSU72Q9NP77 194 aaKnown RBP13.39□□□□□ -0.27
HDDC2-209ENST00000609477 NECTIN3Q9NQS3 549 aa13.39□□□□□ -0.27
HDDC2-209ENST00000609477 VTI1BQ9UEU0 232 aa13.39□□□□□ -0.27
HDDC2-209ENST00000609477 B3GNT3Q9Y2A9 372 aa13.39□□□□□ -0.27
HDDC2-209ENST00000609477 TNRC6AQ8NDV7 1962 aaKnown RBP13.38□□□□□ -0.27
HDDC2-209ENST00000609477 A0A0A6YYD5 115 aa13.38□□□□□ -0.27
HDDC2-209ENST00000609477 A0A1B0GTL3 188 aa13.38□□□□□ -0.27
HDDC2-209ENST00000609477 SAGE2PA6NJ88 616 aa13.38□□□□□ -0.27
HDDC2-209ENST00000609477 MASP2O00187 686 aa13.38□□□□□ -0.27
HDDC2-209ENST00000609477 SAP18O00422 153 aaKnown RBP13.38□□□□□ -0.27
HDDC2-209ENST00000609477 PROM1O43490 865 aa13.38□□□□□ -0.27
HDDC2-209ENST00000609477 SLC28A2O43868 658 aa13.38□□□□□ -0.27
HDDC2-209ENST00000609477 GUCY1B2O75343 617 aa13.38□□□□□ -0.27
HDDC2-209ENST00000609477 ETHE1O95571 254 aa13.38□□□□□ -0.27
HDDC2-209ENST00000609477 PDYNP01213 254 aa13.38□□□□□ -0.27
HDDC2-209ENST00000609477 HMOX2P30519 316 aa13.38□□□□□ -0.27
HDDC2-209ENST00000609477 SLC26A5P58743 744 aa13.38□□□□□ -0.27
HDDC2-209ENST00000609477 TAS2R50P59544 299 aa13.38□□□□□ -0.27
HDDC2-209ENST00000609477 GALNT1Q10472 559 aaPredicted RBP13.38□□□□□ -0.27
HDDC2-209ENST00000609477 STX4Q12846 297 aa13.38□□□□□ -0.27
HDDC2-209ENST00000609477 Q6ZS92 163 aa13.38□□□□□ -0.27
HDDC2-209ENST00000609477 FRMD7Q6ZUT3 714 aa13.38□□□□□ -0.27
HDDC2-209ENST00000609477 PRICKLE2Q7Z3G6 844 aa13.38□□□□□ -0.27
HDDC2-209ENST00000609477 METTL4Q8N3J2 472 aa13.38□□□□□ -0.27
HDDC2-209ENST00000609477 TMEM132CQ8N3T6 1108 aa13.38□□□□□ -0.27
HDDC2-209ENST00000609477 RNF175Q8N4F7 328 aa13.38□□□□□ -0.27
HDDC2-209ENST00000609477 CCNYL1Q8N7R7 359 aa13.38□□□□□ -0.27
HDDC2-209ENST00000609477 RBMXL3Q8N7X1 1067 aaKnown RBP13.38□□□□□ -0.27
HDDC2-209ENST00000609477 CDYL2Q8N8U2 506 aa13.38□□□□□ -0.27
HDDC2-209ENST00000609477 FAM47BQ8NA70 645 aa13.38□□□□□ -0.27
HDDC2-209ENST00000609477 BRIX1Q8TDN6 353 aaKnown RBP13.38□□□□□ -0.27
HDDC2-209ENST00000609477 ELP5Q8TE02 316 aa13.38□□□□□ -0.27
HDDC2-209ENST00000609477 AGAP11Q8TF27 550 aa13.38□□□□□ -0.27
HDDC2-209ENST00000609477 HAS2Q92819 552 aa13.38□□□□□ -0.27
HDDC2-209ENST00000609477 MTFMTQ96DP5 389 aaKnown RBP13.38□□□□□ -0.27
HDDC2-209ENST00000609477 PGM2Q96G03 612 aa13.38□□□□□ -0.27
HDDC2-209ENST00000609477 CNDP1Q96KN2 507 aa13.38□□□□□ -0.27
HDDC2-209ENST00000609477 ZNF354BQ96LW1 612 aa13.38□□□□□ -0.27
HDDC2-209ENST00000609477 RPF2Q9H7B2 306 aaKnown RBP13.38□□□□□ -0.27
HDDC2-209ENST00000609477 WDR41Q9HAD4 459 aa13.38□□□□□ -0.27
HDDC2-209ENST00000609477 ADAP2Q9NPF8 381 aa13.38□□□□□ -0.27
HDDC2-209ENST00000609477 VPS29Q9UBQ0 182 aa13.38□□□□□ -0.27
HDDC2-209ENST00000609477 FBXW2Q9UKT8 454 aa13.38□□□□□ -0.27
HDDC2-209ENST00000609477 CLDN16Q9Y5I7 305 aa13.38□□□□□ -0.27
HDDC2-209ENST00000609477 ACTL7BQ9Y614 415 aa13.38□□□□□ -0.27
HDDC2-209ENST00000609477 IGHV3-20A0A0C4DH32 117 aa13.37□□□□□ -0.27
HDDC2-209ENST00000609477 ARHGAP10A1A4S6 786 aa13.37□□□□□ -0.27
HDDC2-209ENST00000609477 DYTNA2CJ06 578 aa13.37□□□□□ -0.27
HDDC2-209ENST00000609477 MANBAO00462 879 aa13.37□□□□□ -0.27
HDDC2-209ENST00000609477 SH3BGRLO75368 114 aa13.37□□□□□ -0.27
HDDC2-209ENST00000609477 FAM58BPP0C7Q3 252 aa13.37□□□□□ -0.27
HDDC2-209ENST00000609477 MYZAPP0CAP1 466 aa13.37□□□□□ -0.27
HDDC2-209ENST00000609477 ITGAMP11215 1152 aa13.37□□□□□ -0.27
HDDC2-209ENST00000609477 TSPAN8P19075 237 aa13.37□□□□□ -0.27
HDDC2-209ENST00000609477 SERPINB5P36952 375 aa13.37□□□□□ -0.27
HDDC2-209ENST00000609477 IGLV3-21P80748 117 aaPredicted RBP13.37□□□□□ -0.27
HDDC2-209ENST00000609477 TNFRSF17Q02223 184 aa13.37□□□□□ -0.27
HDDC2-209ENST00000609477 PCLAFQ15004 111 aa13.37□□□□□ -0.27
HDDC2-209ENST00000609477 ELAVL1Q15717 326 aaKnown RBP13.37□□□□□ -0.27
HDDC2-209ENST00000609477 ABHD17BQ5VST6 288 aa13.37□□□□□ -0.27
HDDC2-209ENST00000609477 B3GNTL1Q67FW5 361 aaPredicted RBP13.37□□□□□ -0.27
HDDC2-209ENST00000609477 SLC5A8Q8N695 610 aa13.37□□□□□ -0.27
HDDC2-209ENST00000609477 B3GNT7Q8NFL0 401 aa13.37□□□□□ -0.27
HDDC2-209ENST00000609477 TCP10LQ8TDR4 215 aa13.37□□□□□ -0.27
HDDC2-209ENST00000609477 DAZLQ92904 295 aaKnown RBP13.37□□□□□ -0.27
HDDC2-209ENST00000609477 PKNOX2Q96KN3 472 aa13.37□□□□□ -0.27
HDDC2-209ENST00000609477 CSF3RQ99062 836 aa13.37□□□□□ -0.27
HDDC2-209ENST00000609477 PELOQ9BRX2 385 aaKnown RBP13.37□□□□□ -0.27
HDDC2-209ENST00000609477 ALOXE3Q9BYJ1 711 aa13.37□□□□□ -0.27
HDDC2-209ENST00000609477 STMN4Q9H169 189 aaPredicted RBP13.37□□□□□ -0.27
HDDC2-209ENST00000609477 KCNK13Q9HB14 408 aa13.37□□□□□ -0.27
HDDC2-209ENST00000609477 MID1IP1Q9NPA3 183 aa13.37□□□□□ -0.27
HDDC2-209ENST00000609477 SLAMF7Q9NQ25 335 aa13.37□□□□□ -0.27
HDDC2-209ENST00000609477 RYDENQ9NUL5 291 aaKnown RBP13.37□□□□□ -0.27
HDDC2-209ENST00000609477 ABI3Q9P2A4 366 aa13.37□□□□□ -0.27
HDDC2-209ENST00000609477 PTGFRNQ9P2B2 879 aa13.37□□□□□ -0.27
HDDC2-209ENST00000609477 SLC12A4Q9UP95 1085 aa13.37□□□□□ -0.27
HDDC2-209ENST00000609477 ASB4Q9Y574 426 aa13.37□□□□□ -0.27
HDDC2-209ENST00000609477 ZNF462Q96JM2 2506 aa13.37□□□□□ -0.27
HDDC2-209ENST00000609477 TYROBPO43914 113 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms