RNA–Protein interactions for RNA: ENST00000608461.1

HDDC2-206, Transcript of HD domain containing 2, humanhuman

TSL 2

Gene HDDC2, Length 587 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-206ENST00000608461 CPN2P22792 545 aa13.39□□□□□ -0.27
HDDC2-206ENST00000608461 BSGP35613 385 aa13.39□□□□□ -0.27
HDDC2-206ENST00000608461 SOX11P35716 441 aa13.39□□□□□ -0.27
HDDC2-206ENST00000608461 NAGLUP54802 743 aa13.39□□□□□ -0.27
HDDC2-206ENST00000608461 ZNF844Q08AG5 666 aa13.39□□□□□ -0.27
HDDC2-206ENST00000608461 RAPSNQ13702 412 aa13.39□□□□□ -0.27
HDDC2-206ENST00000608461 KRT71Q3SY84 523 aa13.39□□□□□ -0.27
HDDC2-206ENST00000608461 MRM1Q6IN84 353 aaKnown RBP13.39□□□□□ -0.27
HDDC2-206ENST00000608461 CYP20A1Q6UW02 462 aa13.39□□□□□ -0.27
HDDC2-206ENST00000608461 LRIG3Q6UXM1 1119 aa13.39□□□□□ -0.27
HDDC2-206ENST00000608461 RPS27LQ71UM5 84 aaKnown RBP13.39□□□□□ -0.27
HDDC2-206ENST00000608461 SHISA5Q8N114 240 aa13.39□□□□□ -0.27
HDDC2-206ENST00000608461 LGI4Q8N135 537 aa13.39□□□□□ -0.27
HDDC2-206ENST00000608461 METTL6Q8TCB7 284 aa13.39□□□□□ -0.27
HDDC2-206ENST00000608461 SREK1Q8WXA9 508 aaKnown RBP13.39□□□□□ -0.27
HDDC2-206ENST00000608461 TSLPQ969D9 159 aa13.39□□□□□ -0.27
HDDC2-206ENST00000608461 MAPKAP1Q9BPZ7 522 aa13.39□□□□□ -0.27
HDDC2-206ENST00000608461 ZNF717Q9BY31 904 aaPredicted RBP13.39□□□□□ -0.27
HDDC2-206ENST00000608461 RNF32Q9H0A6 362 aa13.39□□□□□ -0.27
HDDC2-206ENST00000608461 GSTO2Q9H4Y5 243 aa13.39□□□□□ -0.27
HDDC2-206ENST00000608461 SSU72Q9NP77 194 aaKnown RBP13.39□□□□□ -0.27
HDDC2-206ENST00000608461 NECTIN3Q9NQS3 549 aa13.39□□□□□ -0.27
HDDC2-206ENST00000608461 VTI1BQ9UEU0 232 aa13.39□□□□□ -0.27
HDDC2-206ENST00000608461 B3GNT3Q9Y2A9 372 aa13.39□□□□□ -0.27
HDDC2-206ENST00000608461 TNRC6AQ8NDV7 1962 aaKnown RBP13.38□□□□□ -0.27
HDDC2-206ENST00000608461 A0A0A6YYD5 115 aa13.38□□□□□ -0.27
HDDC2-206ENST00000608461 A0A1B0GTL3 188 aa13.38□□□□□ -0.27
HDDC2-206ENST00000608461 SAGE2PA6NJ88 616 aa13.38□□□□□ -0.27
HDDC2-206ENST00000608461 MASP2O00187 686 aa13.38□□□□□ -0.27
HDDC2-206ENST00000608461 SAP18O00422 153 aaKnown RBP13.38□□□□□ -0.27
HDDC2-206ENST00000608461 PROM1O43490 865 aa13.38□□□□□ -0.27
HDDC2-206ENST00000608461 SLC28A2O43868 658 aa13.38□□□□□ -0.27
HDDC2-206ENST00000608461 GUCY1B2O75343 617 aa13.38□□□□□ -0.27
HDDC2-206ENST00000608461 ETHE1O95571 254 aa13.38□□□□□ -0.27
HDDC2-206ENST00000608461 PDYNP01213 254 aa13.38□□□□□ -0.27
HDDC2-206ENST00000608461 HMOX2P30519 316 aa13.38□□□□□ -0.27
HDDC2-206ENST00000608461 SLC26A5P58743 744 aa13.38□□□□□ -0.27
HDDC2-206ENST00000608461 TAS2R50P59544 299 aa13.38□□□□□ -0.27
HDDC2-206ENST00000608461 GALNT1Q10472 559 aaPredicted RBP13.38□□□□□ -0.27
HDDC2-206ENST00000608461 STX4Q12846 297 aa13.38□□□□□ -0.27
HDDC2-206ENST00000608461 Q6ZS92 163 aa13.38□□□□□ -0.27
HDDC2-206ENST00000608461 FRMD7Q6ZUT3 714 aa13.38□□□□□ -0.27
HDDC2-206ENST00000608461 PRICKLE2Q7Z3G6 844 aa13.38□□□□□ -0.27
HDDC2-206ENST00000608461 METTL4Q8N3J2 472 aa13.38□□□□□ -0.27
HDDC2-206ENST00000608461 TMEM132CQ8N3T6 1108 aa13.38□□□□□ -0.27
HDDC2-206ENST00000608461 RNF175Q8N4F7 328 aa13.38□□□□□ -0.27
HDDC2-206ENST00000608461 CCNYL1Q8N7R7 359 aa13.38□□□□□ -0.27
HDDC2-206ENST00000608461 RBMXL3Q8N7X1 1067 aaKnown RBP13.38□□□□□ -0.27
HDDC2-206ENST00000608461 CDYL2Q8N8U2 506 aa13.38□□□□□ -0.27
HDDC2-206ENST00000608461 FAM47BQ8NA70 645 aa13.38□□□□□ -0.27
HDDC2-206ENST00000608461 BRIX1Q8TDN6 353 aaKnown RBP13.38□□□□□ -0.27
HDDC2-206ENST00000608461 ELP5Q8TE02 316 aa13.38□□□□□ -0.27
HDDC2-206ENST00000608461 AGAP11Q8TF27 550 aa13.38□□□□□ -0.27
HDDC2-206ENST00000608461 HAS2Q92819 552 aa13.38□□□□□ -0.27
HDDC2-206ENST00000608461 MTFMTQ96DP5 389 aaKnown RBP13.38□□□□□ -0.27
HDDC2-206ENST00000608461 PGM2Q96G03 612 aa13.38□□□□□ -0.27
HDDC2-206ENST00000608461 CNDP1Q96KN2 507 aa13.38□□□□□ -0.27
HDDC2-206ENST00000608461 ZNF354BQ96LW1 612 aa13.38□□□□□ -0.27
HDDC2-206ENST00000608461 RPF2Q9H7B2 306 aaKnown RBP13.38□□□□□ -0.27
HDDC2-206ENST00000608461 WDR41Q9HAD4 459 aa13.38□□□□□ -0.27
HDDC2-206ENST00000608461 ADAP2Q9NPF8 381 aa13.38□□□□□ -0.27
HDDC2-206ENST00000608461 VPS29Q9UBQ0 182 aa13.38□□□□□ -0.27
HDDC2-206ENST00000608461 FBXW2Q9UKT8 454 aa13.38□□□□□ -0.27
HDDC2-206ENST00000608461 CLDN16Q9Y5I7 305 aa13.38□□□□□ -0.27
HDDC2-206ENST00000608461 ACTL7BQ9Y614 415 aa13.38□□□□□ -0.27
HDDC2-206ENST00000608461 IGHV3-20A0A0C4DH32 117 aa13.37□□□□□ -0.27
HDDC2-206ENST00000608461 ARHGAP10A1A4S6 786 aa13.37□□□□□ -0.27
HDDC2-206ENST00000608461 DYTNA2CJ06 578 aa13.37□□□□□ -0.27
HDDC2-206ENST00000608461 MANBAO00462 879 aa13.37□□□□□ -0.27
HDDC2-206ENST00000608461 SH3BGRLO75368 114 aa13.37□□□□□ -0.27
HDDC2-206ENST00000608461 FAM58BPP0C7Q3 252 aa13.37□□□□□ -0.27
HDDC2-206ENST00000608461 MYZAPP0CAP1 466 aa13.37□□□□□ -0.27
HDDC2-206ENST00000608461 ITGAMP11215 1152 aa13.37□□□□□ -0.27
HDDC2-206ENST00000608461 TSPAN8P19075 237 aa13.37□□□□□ -0.27
HDDC2-206ENST00000608461 SERPINB5P36952 375 aa13.37□□□□□ -0.27
HDDC2-206ENST00000608461 IGLV3-21P80748 117 aaPredicted RBP13.37□□□□□ -0.27
HDDC2-206ENST00000608461 TNFRSF17Q02223 184 aa13.37□□□□□ -0.27
HDDC2-206ENST00000608461 PCLAFQ15004 111 aa13.37□□□□□ -0.27
HDDC2-206ENST00000608461 ELAVL1Q15717 326 aaKnown RBP13.37□□□□□ -0.27
HDDC2-206ENST00000608461 ABHD17BQ5VST6 288 aa13.37□□□□□ -0.27
HDDC2-206ENST00000608461 B3GNTL1Q67FW5 361 aaPredicted RBP13.37□□□□□ -0.27
HDDC2-206ENST00000608461 SLC5A8Q8N695 610 aa13.37□□□□□ -0.27
HDDC2-206ENST00000608461 B3GNT7Q8NFL0 401 aa13.37□□□□□ -0.27
HDDC2-206ENST00000608461 TCP10LQ8TDR4 215 aa13.37□□□□□ -0.27
HDDC2-206ENST00000608461 DAZLQ92904 295 aaKnown RBP13.37□□□□□ -0.27
HDDC2-206ENST00000608461 PKNOX2Q96KN3 472 aa13.37□□□□□ -0.27
HDDC2-206ENST00000608461 CSF3RQ99062 836 aa13.37□□□□□ -0.27
HDDC2-206ENST00000608461 PELOQ9BRX2 385 aaKnown RBP13.37□□□□□ -0.27
HDDC2-206ENST00000608461 ALOXE3Q9BYJ1 711 aa13.37□□□□□ -0.27
HDDC2-206ENST00000608461 STMN4Q9H169 189 aaPredicted RBP13.37□□□□□ -0.27
HDDC2-206ENST00000608461 KCNK13Q9HB14 408 aa13.37□□□□□ -0.27
HDDC2-206ENST00000608461 MID1IP1Q9NPA3 183 aa13.37□□□□□ -0.27
HDDC2-206ENST00000608461 SLAMF7Q9NQ25 335 aa13.37□□□□□ -0.27
HDDC2-206ENST00000608461 RYDENQ9NUL5 291 aaKnown RBP13.37□□□□□ -0.27
HDDC2-206ENST00000608461 ABI3Q9P2A4 366 aa13.37□□□□□ -0.27
HDDC2-206ENST00000608461 PTGFRNQ9P2B2 879 aa13.37□□□□□ -0.27
HDDC2-206ENST00000608461 SLC12A4Q9UP95 1085 aa13.37□□□□□ -0.27
HDDC2-206ENST00000608461 ASB4Q9Y574 426 aa13.37□□□□□ -0.27
HDDC2-206ENST00000608461 ZNF462Q96JM2 2506 aa13.37□□□□□ -0.27
HDDC2-206ENST00000608461 TYROBPO43914 113 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms