RNA–Protein interactions for RNA: ENST00000607841.5

CTSA-219, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 571 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-219ENST00000607841 MYO1DO94832 1006 aa13.41□□□□□ -0.26
CTSA-219ENST00000607841 HPP00738 406 aa13.41□□□□□ -0.26
CTSA-219ENST00000607841 PPP2R1BP30154 601 aa13.41□□□□□ -0.26
CTSA-219ENST00000607841 MAPK12P53778 367 aa13.41□□□□□ -0.26
CTSA-219ENST00000607841 ACTN3Q08043 901 aaPredicted RBP13.41□□□□□ -0.26
CTSA-219ENST00000607841 ACSM2AQ08AH3 577 aa13.41□□□□□ -0.26
CTSA-219ENST00000607841 AIMP2Q13155 320 aaKnown RBP13.41□□□□□ -0.26
CTSA-219ENST00000607841 HSP90B2PQ58FF3 399 aa13.41□□□□□ -0.26
CTSA-219ENST00000607841 DCAF10Q5QP82 559 aa13.41□□□□□ -0.26
CTSA-219ENST00000607841 ACSM2BQ68CK6 577 aa13.41□□□□□ -0.26
CTSA-219ENST00000607841 MRM1Q6IN84 353 aaKnown RBP13.41□□□□□ -0.26
CTSA-219ENST00000607841 NDUFAF7Q7L592 441 aa13.41□□□□□ -0.26
CTSA-219ENST00000607841 CPEB2Q7Z5Q1 589 aaKnown RBP13.41□□□□□ -0.26
CTSA-219ENST00000607841 TMEM151BQ8IW70 566 aa13.41□□□□□ -0.26
CTSA-219ENST00000607841 SHISA5Q8N114 240 aa13.41□□□□□ -0.26
CTSA-219ENST00000607841 C1orf52Q8N6N3 182 aaKnown RBP13.41□□□□□ -0.26
CTSA-219ENST00000607841 CHTF18Q8WVB6 975 aa13.41□□□□□ -0.26
CTSA-219ENST00000607841 TWIST2Q8WVJ9 160 aa13.41□□□□□ -0.26
CTSA-219ENST00000607841 TANKQ92844 425 aa13.41□□□□□ -0.26
CTSA-219ENST00000607841 C8orf44Q96CB5 159 aa13.41□□□□□ -0.26
CTSA-219ENST00000607841 WBP1Q96G27 269 aa13.41□□□□□ -0.26
CTSA-219ENST00000607841 RIC8BQ9NVN3 520 aa13.41□□□□□ -0.26
CTSA-219ENST00000607841 ZNF446Q9NWS9 450 aa13.41□□□□□ -0.26
CTSA-219ENST00000607841 ZDHHC2Q9UIJ5 367 aa13.41□□□□□ -0.26
CTSA-219ENST00000607841 FBXL4Q9UKA2 621 aa13.41□□□□□ -0.26
CTSA-219ENST00000607841 G3BP2Q9UN86 482 aaKnown RBP13.41□□□□□ -0.26
CTSA-219ENST00000607841 RAP2CQ9Y3L5 183 aa13.41□□□□□ -0.26
CTSA-219ENST00000607841 ASB4Q9Y574 426 aa13.41□□□□□ -0.26
CTSA-219ENST00000607841 DNAJC15Q9Y5T4 150 aa13.41□□□□□ -0.26
CTSA-219ENST00000607841 IGHV1-45A0A0A0MS14 117 aa13.4□□□□□ -0.26
CTSA-219ENST00000607841 OR2W5A6NFC9 320 aa13.4□□□□□ -0.26
CTSA-219ENST00000607841 PROM1O43490 865 aa13.4□□□□□ -0.26
CTSA-219ENST00000607841 ITM2AO43736 263 aa13.4□□□□□ -0.26
CTSA-219ENST00000607841 TMPRSS11DO60235 418 aa13.4□□□□□ -0.26
CTSA-219ENST00000607841 KLHL41O60662 606 aa13.4□□□□□ -0.26
CTSA-219ENST00000607841 GBAP04062 536 aa13.4□□□□□ -0.26
CTSA-219ENST00000607841 SFTPCP11686 197 aa13.4□□□□□ -0.26
CTSA-219ENST00000607841 ICAM2P13598 275 aa13.4□□□□□ -0.26
CTSA-219ENST00000607841 CHN1P15882 459 aa13.4□□□□□ -0.26
CTSA-219ENST00000607841 TPP2P29144 1249 aaPredicted RBP13.4□□□□□ -0.26
CTSA-219ENST00000607841 GSTM5P46439 218 aa13.4□□□□□ -0.26
CTSA-219ENST00000607841 OR4D2P58180 307 aa13.4□□□□□ -0.26
CTSA-219ENST00000607841 TRA2BP62995 288 aaKnown RBP13.4□□□□□ -0.26
CTSA-219ENST00000607841 AP2B1P63010 937 aa13.4□□□□□ -0.26
CTSA-219ENST00000607841 PPP2R2AP63151 447 aa13.4□□□□□ -0.26
CTSA-219ENST00000607841 BTG2P78543 158 aa13.4□□□□□ -0.26
CTSA-219ENST00000607841 TNFRSF17Q02223 184 aa13.4□□□□□ -0.26
CTSA-219ENST00000607841 BTKQ06187 659 aa13.4□□□□□ -0.26
CTSA-219ENST00000607841 BST1Q10588 318 aa13.4□□□□□ -0.26
CTSA-219ENST00000607841 STX4Q12846 297 aa13.4□□□□□ -0.26
CTSA-219ENST00000607841 BIKQ13323 160 aa13.4□□□□□ -0.26
CTSA-219ENST00000607841 SERTAD2Q14140 314 aa13.4□□□□□ -0.26
CTSA-219ENST00000607841 ANKRD37Q7Z713 158 aa13.4□□□□□ -0.26
CTSA-219ENST00000607841 SCUBE1Q8IWY4 988 aa13.4□□□□□ -0.26
CTSA-219ENST00000607841 DDIASQ8IXT1 998 aa13.4□□□□□ -0.26
CTSA-219ENST00000607841 FAM76AQ8TAV0 307 aa13.4□□□□□ -0.26
CTSA-219ENST00000607841 AGR3Q8TD06 166 aa13.4□□□□□ -0.26
CTSA-219ENST00000607841 TTC9Q92623 222 aa13.4□□□□□ -0.26
CTSA-219ENST00000607841 UBL7Q96S82 380 aaPredicted RBP13.4□□□□□ -0.26
CTSA-219ENST00000607841 CSF3RQ99062 836 aa13.4□□□□□ -0.26
CTSA-219ENST00000607841 LPAR4Q99677 370 aa13.4□□□□□ -0.26
CTSA-219ENST00000607841 TUBB6Q9BUF5 446 aa13.4□□□□□ -0.26
CTSA-219ENST00000607841 ZNF700Q9H0M5 742 aa13.4□□□□□ -0.26
CTSA-219ENST00000607841 RPF2Q9H7B2 306 aaKnown RBP13.4□□□□□ -0.26
CTSA-219ENST00000607841 MANSC1Q9H8J5 431 aa13.4□□□□□ -0.26
CTSA-219ENST00000607841 THAP1Q9NVV9 213 aa13.4□□□□□ -0.26
CTSA-219ENST00000607841 SIRT5Q9NXA8 310 aa13.4□□□□□ -0.26
CTSA-219ENST00000607841 MCM8Q9UJA3 840 aa13.4□□□□□ -0.26
CTSA-219ENST00000607841 ATG4BQ9Y4P1 393 aa13.4□□□□□ -0.26
CTSA-219ENST00000607841 CFAP47Q6ZTR5 3102 aa13.4□□□□□ -0.26
CTSA-219ENST00000607841 IGKV3D-11A0A0A0MRZ8 115 aa13.39□□□□□ -0.27
CTSA-219ENST00000607841 GNG14A0A1W2PPG7 69 aa13.39□□□□□ -0.27
CTSA-219ENST00000607841 TCRBV16S1A1N1A0A5B0 115 aa13.39□□□□□ -0.27
CTSA-219ENST00000607841 NPIPB8E9PQR5 432 aa13.39□□□□□ -0.27
CTSA-219ENST00000607841 MKRN2OSH3BPM6 223 aa13.39□□□□□ -0.27
CTSA-219ENST00000607841 PCDH7O60245 1069 aa13.39□□□□□ -0.27
CTSA-219ENST00000607841 LYPLA1O75608 230 aaPredicted RBP13.39□□□□□ -0.27
CTSA-219ENST00000607841 NR2F6P10588 404 aa13.39□□□□□ -0.27
CTSA-219ENST00000607841 COX6A1P12074 109 aa13.39□□□□□ -0.27
CTSA-219ENST00000607841 MAOAP21397 527 aa13.39□□□□□ -0.27
CTSA-219ENST00000607841 PRPH2P23942 346 aa13.39□□□□□ -0.27
CTSA-219ENST00000607841 ARRB2P32121 409 aa13.39□□□□□ -0.27
CTSA-219ENST00000607841 RPL14P50914 215 aaKnown RBP13.39□□□□□ -0.27
CTSA-219ENST00000607841 CCL11P51671 97 aa13.39□□□□□ -0.27
CTSA-219ENST00000607841 EFNA3P52797 238 aa13.39□□□□□ -0.27
CTSA-219ENST00000607841 HNRNPH2P55795 449 aaKnown RBP13.39□□□□□ -0.27
CTSA-219ENST00000607841 POLE2P56282 527 aa13.39□□□□□ -0.27
CTSA-219ENST00000607841 EEF1A2Q05639 463 aaKnown RBP13.39□□□□□ -0.27
CTSA-219ENST00000607841 UGT3A2Q3SY77 523 aa13.39□□□□□ -0.27
CTSA-219ENST00000607841 IRAK1BP1Q5VVH5 260 aa13.39□□□□□ -0.27
CTSA-219ENST00000607841 FAM219BQ5XKK7 198 aa13.39□□□□□ -0.27
CTSA-219ENST00000607841 GALNT18Q6P9A2 607 aa13.39□□□□□ -0.27
CTSA-219ENST00000607841 LANCL3Q6ZV70 420 aa13.39□□□□□ -0.27
CTSA-219ENST00000607841 DYDC1Q8WWB3 177 aa13.39□□□□□ -0.27
CTSA-219ENST00000607841 TSLPQ969D9 159 aa13.39□□□□□ -0.27
CTSA-219ENST00000607841 APIPQ96GX9 242 aa13.39□□□□□ -0.27
CTSA-219ENST00000607841 FAIM2Q9BWQ8 316 aa13.39□□□□□ -0.27
CTSA-219ENST00000607841 ADNPQ9H2P0 1102 aa13.39□□□□□ -0.27
CTSA-219ENST00000607841 ZNF160Q9HCG1 818 aa13.39□□□□□ -0.27
CTSA-219ENST00000607841 NECTIN3Q9NQS3 549 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms