RNA–Protein interactions for RNA: ENST00000602716.5

PPFIA3-207, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 2,020 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-207ENST00000602716 SCAMP2O15127 329 aaKnown RBP16.46■□□□□ 0.23
PPFIA3-207ENST00000602716 PRKRAO75569 313 aaKnown RBP16.46■□□□□ 0.23
PPFIA3-207ENST00000602716 H6PDO95479 791 aa16.46■□□□□ 0.23
PPFIA3-207ENST00000602716 GSTM2P28161 218 aa16.46■□□□□ 0.23
PPFIA3-207ENST00000602716 GABRA4P48169 554 aa16.46■□□□□ 0.23
PPFIA3-207ENST00000602716 CAPRIN1Q14444 709 aaKnown RBP16.46■□□□□ 0.23
PPFIA3-207ENST00000602716 COQ5Q5HYK3 327 aa16.46■□□□□ 0.23
PPFIA3-207ENST00000602716 NHSL2Q5HYW2 709 aa16.46■□□□□ 0.23
PPFIA3-207ENST00000602716 CCNYL2Q5T2Q4 361 aa16.46■□□□□ 0.23
PPFIA3-207ENST00000602716 LAIR1Q6GTX8 287 aa16.46■□□□□ 0.23
PPFIA3-207ENST00000602716 DNAJC14Q6Y2X3 702 aaPredicted RBP16.46■□□□□ 0.23
PPFIA3-207ENST00000602716 ZBTB49Q6ZSB9 765 aa16.46■□□□□ 0.23
PPFIA3-207ENST00000602716 ANKRD46Q86W74 232 aa16.46■□□□□ 0.23
PPFIA3-207ENST00000602716 NUDT13Q86X67 352 aa16.46■□□□□ 0.23
PPFIA3-207ENST00000602716 OR2L5Q8NG80 312 aa16.46■□□□□ 0.23
PPFIA3-207ENST00000602716 RGMAQ96B86 450 aa16.46■□□□□ 0.23
PPFIA3-207ENST00000602716 CCDC3Q9BQI4 270 aa16.46■□□□□ 0.23
PPFIA3-207ENST00000602716 ANKRD60Q9BZ19 345 aa16.46■□□□□ 0.23
PPFIA3-207ENST00000602716 RAB33BQ9H082 229 aa16.46■□□□□ 0.23
PPFIA3-207ENST00000602716 PRDM7Q9NQW5 492 aa16.46■□□□□ 0.23
PPFIA3-207ENST00000602716 CMTM6Q9NX76 183 aa16.46■□□□□ 0.23
PPFIA3-207ENST00000602716 TEX10Q9NXF1 929 aaPredicted RBP16.46■□□□□ 0.23
PPFIA3-207ENST00000602716 CCDC160A6NGH7 325 aa16.45■□□□□ 0.22
PPFIA3-207ENST00000602716 H3BNH8 94 aa16.45■□□□□ 0.22
PPFIA3-207ENST00000602716 SOCS2O14508 198 aa16.45■□□□□ 0.22
PPFIA3-207ENST00000602716 DNAJB6O75190 326 aa16.45■□□□□ 0.22
PPFIA3-207ENST00000602716 MED26O95402 600 aa16.45■□□□□ 0.22
PPFIA3-207ENST00000602716 CKMT2P17540 419 aa16.45■□□□□ 0.22
PPFIA3-207ENST00000602716 SEPHS1P49903 392 aa16.45■□□□□ 0.22
PPFIA3-207ENST00000602716 BNIP2Q12982 314 aa16.45■□□□□ 0.22
PPFIA3-207ENST00000602716 PGS1Q32NB8 556 aa16.45■□□□□ 0.22
PPFIA3-207ENST00000602716 OR4C11Q6IEV9 310 aa16.45■□□□□ 0.22
PPFIA3-207ENST00000602716 OR4F3Q6IEY1 312 aa16.45■□□□□ 0.22
PPFIA3-207ENST00000602716 FAM71E1Q6IPT2 247 aa16.45■□□□□ 0.22
PPFIA3-207ENST00000602716 LCN8Q6JVE9 175 aa16.45■□□□□ 0.22
PPFIA3-207ENST00000602716 FAM180BQ6P0A1 224 aa16.45■□□□□ 0.22
PPFIA3-207ENST00000602716 DNAJC22Q8N4W6 341 aa16.45■□□□□ 0.22
PPFIA3-207ENST00000602716 CSNK1A1LQ8N752 337 aa16.45■□□□□ 0.22
PPFIA3-207ENST00000602716 GOLM1Q8NBJ4 401 aa16.45■□□□□ 0.22
PPFIA3-207ENST00000602716 UTP15Q8TED0 518 aaKnown RBP16.45■□□□□ 0.22
PPFIA3-207ENST00000602716 ZBTB18Q99592 522 aa16.45■□□□□ 0.22
PPFIA3-207ENST00000602716 PNPLA3Q9NST1 481 aa16.45■□□□□ 0.22
PPFIA3-207ENST00000602716 OLAHQ9NV23 265 aa16.45■□□□□ 0.22
PPFIA3-207ENST00000602716 FAM86C1Q9NVL1 165 aa16.45■□□□□ 0.22
PPFIA3-207ENST00000602716 PGRP06401 933 aa16.45■□□□□ 0.22
PPFIA3-207ENST00000602716 SLC35G6P0C7Q6 338 aa16.45■□□□□ 0.22
PPFIA3-207ENST00000602716 LAMP1P11279 417 aa16.45■□□□□ 0.22
PPFIA3-207ENST00000602716 COX7A2P14406 83 aa16.45■□□□□ 0.22
PPFIA3-207ENST00000602716 ZNF23P17027 643 aa16.45■□□□□ 0.22
PPFIA3-207ENST00000602716 SLC6A2P23975 617 aa16.45■□□□□ 0.22
PPFIA3-207ENST00000602716 ATP5A1P25705 553 aaKnown RBP16.45■□□□□ 0.22
PPFIA3-207ENST00000602716 CCL7P80098 99 aa16.45■□□□□ 0.22
PPFIA3-207ENST00000602716 FOXM1Q08050 763 aa16.45■□□□□ 0.22
PPFIA3-207ENST00000602716 SPATS1Q496A3 300 aa16.45■□□□□ 0.22
PPFIA3-207ENST00000602716 GTDC1Q4AE62 458 aa16.45■□□□□ 0.22
PPFIA3-207ENST00000602716 TMEM35AQ53FP2 167 aa16.45■□□□□ 0.22
PPFIA3-207ENST00000602716 PACRGLQ8N7B6 248 aa16.45■□□□□ 0.22
PPFIA3-207ENST00000602716 TESCQ96BS2 214 aa16.45■□□□□ 0.22
PPFIA3-207ENST00000602716 LRRC58Q96CX6 371 aa16.45■□□□□ 0.22
PPFIA3-207ENST00000602716 LRFN3Q9BTN0 628 aa16.45■□□□□ 0.22
PPFIA3-207ENST00000602716 DDX31Q9H8H2 851 aaKnown RBP16.45■□□□□ 0.22
PPFIA3-207ENST00000602716 MYNNQ9NPC7 610 aa16.45■□□□□ 0.22
PPFIA3-207ENST00000602716 SLC6A13Q9NSD5 602 aa16.45■□□□□ 0.22
PPFIA3-207ENST00000602716 GID8Q9NWU2 228 aa16.45■□□□□ 0.22
PPFIA3-207ENST00000602716 SOHLH2Q9NX45 425 aa16.45■□□□□ 0.22
PPFIA3-207ENST00000602716 C5AR2Q9P296 337 aa16.45■□□□□ 0.22
PPFIA3-207ENST00000602716 MYRFQ9Y2G1 1151 aa16.45■□□□□ 0.22
PPFIA3-207ENST00000602716 CEPT1Q9Y6K0 416 aa16.45■□□□□ 0.22
PPFIA3-207ENST00000602716 DHRS12A0PJE2 317 aa16.44■□□□□ 0.22
PPFIA3-207ENST00000602716 ZNF860A6NHJ4 632 aa16.44■□□□□ 0.22
PPFIA3-207ENST00000602716 GABRR3A8MPY1 467 aa16.44■□□□□ 0.22
PPFIA3-207ENST00000602716 A8MU76 341 aa16.44■□□□□ 0.22
PPFIA3-207ENST00000602716 AGRPO00253 132 aa16.44■□□□□ 0.22
PPFIA3-207ENST00000602716 PLOD2O00469 737 aa16.44■□□□□ 0.22
PPFIA3-207ENST00000602716 HNRNPRO43390 633 aaKnown RBP16.44■□□□□ 0.22
PPFIA3-207ENST00000602716 RPLP0P05388 317 aaKnown RBP16.44■□□□□ 0.22
PPFIA3-207ENST00000602716 PRPS1L1P21108 318 aa16.44■□□□□ 0.22
PPFIA3-207ENST00000602716 MLLT3P42568 568 aaPredicted RBP16.44■□□□□ 0.22
PPFIA3-207ENST00000602716 MAPK12P53778 367 aa16.44■□□□□ 0.22
PPFIA3-207ENST00000602716 WNT3P56703 355 aa16.44■□□□□ 0.22
PPFIA3-207ENST00000602716 GPLD1P80108 840 aa16.44■□□□□ 0.22
PPFIA3-207ENST00000602716 RGS1Q08116 209 aa16.44■□□□□ 0.22
PPFIA3-207ENST00000602716 PWP1Q13610 501 aa16.44■□□□□ 0.22
PPFIA3-207ENST00000602716 MPEG1Q2M385 716 aa16.44■□□□□ 0.22
PPFIA3-207ENST00000602716 TBCELQ5QJ74 424 aa16.44■□□□□ 0.22
PPFIA3-207ENST00000602716 ZNF574Q6ZN55 896 aaPredicted RBP16.44■□□□□ 0.22
PPFIA3-207ENST00000602716 MCATQ8IVS2 390 aaKnown RBP16.44■□□□□ 0.22
PPFIA3-207ENST00000602716 TFAP2CQ92754 450 aa16.44■□□□□ 0.22
PPFIA3-207ENST00000602716 GAL3ST3Q96A11 431 aa16.44■□□□□ 0.22
PPFIA3-207ENST00000602716 TM4SF18Q96CE8 201 aa16.44■□□□□ 0.22
PPFIA3-207ENST00000602716 ZDHHC12Q96GR4 267 aa16.44■□□□□ 0.22
PPFIA3-207ENST00000602716 QRFPRQ96P65 431 aa16.44■□□□□ 0.22
PPFIA3-207ENST00000602716 SYNDIG1Q9H7V2 258 aa16.44■□□□□ 0.22
PPFIA3-207ENST00000602716 AHSPQ9NZD4 102 aa16.44■□□□□ 0.22
PPFIA3-207ENST00000602716 ACTR3BQ9P1U1 418 aa16.44■□□□□ 0.22
PPFIA3-207ENST00000602716 LEF1Q9UJU2 399 aaPredicted RBP16.44■□□□□ 0.22
PPFIA3-207ENST00000602716 RP1P56715 2156 aa16.44■□□□□ 0.22
PPFIA3-207ENST00000602716 WASHC1A8K0Z3 465 aa16.43■□□□□ 0.22
PPFIA3-207ENST00000602716 C1QCP02747 245 aa16.43■□□□□ 0.22
PPFIA3-207ENST00000602716 HIST1H1TP22492 207 aaPredicted RBP16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms