RNA–Protein interactions for RNA: ENST00000594828.7

LSM4-204, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-204ENST00000594828 SETDB1Q15047 1291 aa21.88■■□□□ 1.09
LSM4-204ENST00000594828 TMEM156Q8N614 296 aa21.88■■□□□ 1.09
LSM4-204ENST00000594828 VTI1BQ9UEU0 232 aa21.88■■□□□ 1.09
LSM4-204ENST00000594828 DMGDHQ9UI17 866 aaKnown RBP21.88■■□□□ 1.09
LSM4-204ENST00000594828 SH3BGRL2Q9UJC5 107 aa21.88■■□□□ 1.09
LSM4-204ENST00000594828 MYOCOSA0A1B0GUC4 107 aa21.87■■□□□ 1.09
LSM4-204ENST00000594828 SAP18O00422 153 aaKnown RBP21.87■■□□□ 1.09
LSM4-204ENST00000594828 ALDOAP04075 364 aaKnown RBP21.87■■□□□ 1.09
LSM4-204ENST00000594828 DDX39BQ13838 428 aaKnown RBP21.87■■□□□ 1.09
LSM4-204ENST00000594828 UBAP2Q5T6F2 1119 aaKnown RBP21.87■■□□□ 1.09
LSM4-204ENST00000594828 DEPDC1Q5TB30 811 aa21.87■■□□□ 1.09
LSM4-204ENST00000594828 KHDRBS2Q5VWX1 349 aaKnown RBP21.87■■□□□ 1.09
LSM4-204ENST00000594828 LIPJQ5W064 366 aa21.87■■□□□ 1.09
LSM4-204ENST00000594828 MYLK4Q86YV6 388 aaPredicted RBP21.87■■□□□ 1.09
LSM4-204ENST00000594828 CPSF7Q8N684 471 aaKnown RBP21.87■■□□□ 1.09
LSM4-204ENST00000594828 HUS1BQ8NHY5 278 aa21.87■■□□□ 1.09
LSM4-204ENST00000594828 DAZLQ92904 295 aaKnown RBP21.87■■□□□ 1.09
LSM4-204ENST00000594828 GPR78Q96P69 363 aa21.87■■□□□ 1.09
LSM4-204ENST00000594828 VPS11Q9H270 941 aa21.87■■□□□ 1.09
LSM4-204ENST00000594828 OR51B5Q9H339 312 aa21.87■■□□□ 1.09
LSM4-204ENST00000594828 DIDO1Q9BTC0 2240 aaKnown RBP21.86■■□□□ 1.09
LSM4-204ENST00000594828 ASNA1O43681 348 aa21.86■■□□□ 1.09
LSM4-204ENST00000594828 KLK8O60259 260 aa21.86■■□□□ 1.09
LSM4-204ENST00000594828 LDB3O75112 727 aa21.86■■□□□ 1.09
LSM4-204ENST00000594828 SCELO95171 688 aa21.86■■□□□ 1.09
LSM4-204ENST00000594828 ACSL3O95573 720 aa21.86■■□□□ 1.09
LSM4-204ENST00000594828 TNNI3P19429 210 aa21.86■■□□□ 1.09
LSM4-204ENST00000594828 PIK3CBP42338 1070 aa21.86■■□□□ 1.09
LSM4-204ENST00000594828 SSR2P43308 183 aa21.86■■□□□ 1.09
LSM4-204ENST00000594828 SERTAD2Q14140 314 aa21.86■■□□□ 1.09
LSM4-204ENST00000594828 OR4C11Q6IEV9 310 aa21.86■■□□□ 1.09
LSM4-204ENST00000594828 MTFR2Q6P444 385 aa21.86■■□□□ 1.09
LSM4-204ENST00000594828 SIAH3Q8IW03 269 aa21.86■■□□□ 1.09
LSM4-204ENST00000594828 CYP4Z2PQ8N1L4 340 aa21.86■■□□□ 1.09
LSM4-204ENST00000594828 NOA1Q8NC60 698 aaKnown RBP21.86■■□□□ 1.09
LSM4-204ENST00000594828 MORN4Q8NDC4 146 aa21.86■■□□□ 1.09
LSM4-204ENST00000594828 MNS1Q8NEH6 495 aa21.86■■□□□ 1.09
LSM4-204ENST00000594828 IFT81Q8WYA0 676 aa21.86■■□□□ 1.09
LSM4-204ENST00000594828 CCDC120Q96HB5 630 aa21.86■■□□□ 1.09
LSM4-204ENST00000594828 MAGED4Q96JG8 741 aa21.86■■□□□ 1.09
LSM4-204ENST00000594828 CENPKQ9BS16 269 aa21.86■■□□□ 1.09
LSM4-204ENST00000594828 FUT8Q9BYC5 575 aa21.86■■□□□ 1.09
LSM4-204ENST00000594828 CDC42EP4Q9H3Q1 356 aaKnown RBP21.86■■□□□ 1.09
LSM4-204ENST00000594828 ACTR8Q9H981 624 aa21.86■■□□□ 1.09
LSM4-204ENST00000594828 KLF13Q9Y2Y9 288 aaPredicted RBP21.86■■□□□ 1.09
LSM4-204ENST00000594828 YARS2Q9Y2Z4 477 aaKnown RBP21.86■■□□□ 1.09
LSM4-204ENST00000594828 PCDHGA11Q9Y5H2 935 aa21.86■■□□□ 1.09
LSM4-204ENST00000594828 TNPO3Q9Y5L0 923 aaKnown RBP21.86■■□□□ 1.09
LSM4-204ENST00000594828 KLRC4-KLRK1H3BQV0 150 aa21.85■■□□□ 1.09
LSM4-204ENST00000594828 PRKNO60260 465 aaPredicted RBP21.85■■□□□ 1.09
LSM4-204ENST00000594828 INHBAP08476 426 aa21.85■■□□□ 1.09
LSM4-204ENST00000594828 ZNF24P17028 368 aa21.85■■□□□ 1.09
LSM4-204ENST00000594828 CPN2P22792 545 aa21.85■■□□□ 1.09
LSM4-204ENST00000594828 SSR4P51571 173 aa21.85■■□□□ 1.09
LSM4-204ENST00000594828 RAP1GDS1P52306 607 aa21.85■■□□□ 1.09
LSM4-204ENST00000594828 SLAMF1Q13291 335 aa21.85■■□□□ 1.09
LSM4-204ENST00000594828 PCBP2Q15366 365 aaKnown RBP eCLIP21.85■■□□□ 1.09
LSM4-204ENST00000594828 SPPL2CQ8IUH8 684 aa21.85■■□□□ 1.09
LSM4-204ENST00000594828 SULF2Q8IWU5 870 aa21.85■■□□□ 1.09
LSM4-204ENST00000594828 SLC34A3Q8N130 599 aa21.85■■□□□ 1.09
LSM4-204ENST00000594828 RNF175Q8N4F7 328 aa21.85■■□□□ 1.09
LSM4-204ENST00000594828 OR14A16Q8NHC5 309 aa21.85■■□□□ 1.09
LSM4-204ENST00000594828 PTPMT1Q8WUK0 201 aaPredicted RBP21.85■■□□□ 1.09
LSM4-204ENST00000594828 SLC44A1Q8WWI5 657 aa21.85■■□□□ 1.09
LSM4-204ENST00000594828 RGMAQ96B86 450 aa21.85■■□□□ 1.09
LSM4-204ENST00000594828 MTERF1Q99551 399 aaKnown RBP21.85■■□□□ 1.09
LSM4-204ENST00000594828 CPSF2Q9P2I0 782 aaKnown RBP21.85■■□□□ 1.09
LSM4-204ENST00000594828 ZNF835Q9Y2P0 537 aa21.85■■□□□ 1.09
LSM4-204ENST00000594828 TSC22D4Q9Y3Q8 395 aa21.85■■□□□ 1.09
LSM4-204ENST00000594828 LRRC14BA6NHZ5 514 aa21.84■■□□□ 1.09
LSM4-204ENST00000594828 GTF2H2Q13888 395 aa21.84■■□□□ 1.09
LSM4-204ENST00000594828 C3AR1Q16581 482 aa21.84■■□□□ 1.09
LSM4-204ENST00000594828 RNFT1Q5M7Z0 435 aa21.84■■□□□ 1.09
LSM4-204ENST00000594828 GTF2H2CQ6P1K8 395 aa21.84■■□□□ 1.09
LSM4-204ENST00000594828 HSDL2Q6YN16 418 aa21.84■■□□□ 1.09
LSM4-204ENST00000594828 PLD6Q8N2A8 252 aaKnown RBP21.84■■□□□ 1.09
LSM4-204ENST00000594828 POGLUT1Q8NBL1 392 aa21.84■■□□□ 1.09
LSM4-204ENST00000594828 C7orf57Q8NEG2 295 aa21.84■■□□□ 1.09
LSM4-204ENST00000594828 ITLN2Q8WWU7 325 aaPredicted RBP21.84■■□□□ 1.09
LSM4-204ENST00000594828 REPS1Q96D71 796 aa21.84■■□□□ 1.09
LSM4-204ENST00000594828 FMO2Q99518 471 aa21.84■■□□□ 1.09
LSM4-204ENST00000594828 SORBS1Q9BX66 1292 aaKnown RBP21.84■■□□□ 1.09
LSM4-204ENST00000594828 OR8D2Q9GZM6 311 aa21.84■■□□□ 1.09
LSM4-204ENST00000594828 IPPKQ9H8X2 491 aa21.84■■□□□ 1.09
LSM4-204ENST00000594828 LIN28AQ9H9Z2 209 aaKnown RBP21.84■■□□□ 1.09
LSM4-204ENST00000594828 DMRT3Q9NQL9 472 aa21.84■■□□□ 1.09
LSM4-204ENST00000594828 MYOTQ9UBF9 498 aa21.84■■□□□ 1.09
LSM4-204ENST00000594828 IKBKGQ9Y6K9 419 aa21.84■■□□□ 1.09
LSM4-204ENST00000594828 TMEM200CA6NKL6 621 aa21.83■■□□□ 1.09
LSM4-204ENST00000594828 C17orf105B2RV13 164 aa21.83■■□□□ 1.09
LSM4-204ENST00000594828 UGDHO60701 494 aa21.83■■□□□ 1.09
LSM4-204ENST00000594828 OR2J2O76002 312 aa21.83■■□□□ 1.09
LSM4-204ENST00000594828 CTAGE8P0CG41 777 aa21.83■■□□□ 1.09
LSM4-204ENST00000594828 ESRRAP11474 423 aaPredicted RBP21.83■■□□□ 1.09
LSM4-204ENST00000594828 PTX3P26022 381 aaPredicted RBP21.83■■□□□ 1.09
LSM4-204ENST00000594828 PIK3CGP48736 1102 aa21.83■■□□□ 1.09
LSM4-204ENST00000594828 MEOX1P50221 254 aa21.83■■□□□ 1.09
LSM4-204ENST00000594828 PHEXP78562 749 aa21.83■■□□□ 1.09
LSM4-204ENST00000594828 ID2Q02363 134 aa21.83■■□□□ 1.09
LSM4-204ENST00000594828 SP5Q6BEB4 398 aaPredicted RBP21.83■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms