RNA–Protein interactions for RNA: ENST00000593074.5

CLIP3-206, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLIP3, Length 2,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-206ENST00000593074 GTF2IRD2Q86UP8 949 aa18.73■□□□□ 0.59
CLIP3-206ENST00000593074 PLD3Q8IV08 490 aa18.73■□□□□ 0.59
CLIP3-206ENST00000593074 MAGED4Q96JG8 741 aa18.73■□□□□ 0.59
CLIP3-206ENST00000593074 PITX2Q99697 317 aa18.73■□□□□ 0.59
CLIP3-206ENST00000593074 KCNK12Q9HB15 430 aa18.73■□□□□ 0.59
CLIP3-206ENST00000593074 FGF22Q9HCT0 170 aa18.73■□□□□ 0.59
CLIP3-206ENST00000593074 PAK1IP1Q9NWT1 392 aaPredicted RBP18.73■□□□□ 0.59
CLIP3-206ENST00000593074 SNX8Q9Y5X2 465 aa18.73■□□□□ 0.59
CLIP3-206ENST00000593074 PRAMEF25A6NGN4 478 aa18.72■□□□□ 0.59
CLIP3-206ENST00000593074 PDZK1P1A8MUH7 402 aa18.72■□□□□ 0.59
CLIP3-206ENST00000593074 C2CD4DB7Z1M9 353 aa18.72■□□□□ 0.59
CLIP3-206ENST00000593074 HOXC4P09017 264 aaPredicted RBP18.72■□□□□ 0.59
CLIP3-206ENST00000593074 MANFP55145 182 aaKnown RBP18.72■□□□□ 0.59
CLIP3-206ENST00000593074 IL1RL1Q01638 556 aa18.72■□□□□ 0.59
CLIP3-206ENST00000593074 RPE65Q16518 533 aa18.72■□□□□ 0.59
CLIP3-206ENST00000593074 EOGTQ5NDL2 527 aa18.72■□□□□ 0.59
CLIP3-206ENST00000593074 KIAA1614Q5VZ46 1190 aa18.72■□□□□ 0.59
CLIP3-206ENST00000593074 OR4C11Q6IEV9 310 aa18.72■□□□□ 0.59
CLIP3-206ENST00000593074 GEMIN6Q8WXD5 167 aaKnown RBP18.72■□□□□ 0.59
CLIP3-206ENST00000593074 DNASE1L2Q92874 299 aa18.72■□□□□ 0.59
CLIP3-206ENST00000593074 PDXPQ96GD0 296 aa18.72■□□□□ 0.59
CLIP3-206ENST00000593074 TEFMQ96QE5 360 aaKnown RBP18.72■□□□□ 0.59
CLIP3-206ENST00000593074 ZNF300Q96RE9 604 aaPredicted RBP18.72■□□□□ 0.59
CLIP3-206ENST00000593074 APOL4Q9BPW4 351 aa18.72■□□□□ 0.59
CLIP3-206ENST00000593074 GABARAPL3Q9BY60 117 aa18.72■□□□□ 0.59
CLIP3-206ENST00000593074 AICDAQ9GZX7 198 aa18.72■□□□□ 0.59
CLIP3-206ENST00000593074 TEX10Q9NXF1 929 aaPredicted RBP18.72■□□□□ 0.59
CLIP3-206ENST00000593074 GMPPBQ9Y5P6 360 aa18.72■□□□□ 0.59
CLIP3-206ENST00000593074 LRIT2A6NDA9 550 aa18.72■□□□□ 0.59
CLIP3-206ENST00000593074 POM121BA6NF01 834 aa18.72■□□□□ 0.59
CLIP3-206ENST00000593074 H3BQ06 376 aaPredicted RBP18.72■□□□□ 0.59
CLIP3-206ENST00000593074 ANGPTL1O95841 491 aa18.72■□□□□ 0.59
CLIP3-206ENST00000593074 TNFRSF1BP20333 461 aa18.72■□□□□ 0.59
CLIP3-206ENST00000593074 TMEM35AQ53FP2 167 aa18.72■□□□□ 0.59
CLIP3-206ENST00000593074 TSPYL5Q86VY4 417 aaPredicted RBP18.72■□□□□ 0.59
CLIP3-206ENST00000593074 OR4C15Q8NGM1 316 aa18.72■□□□□ 0.59
CLIP3-206ENST00000593074 RPLP0P6Q8NHW5 317 aa18.72■□□□□ 0.59
CLIP3-206ENST00000593074 ZBED6CLQ96FA7 236 aaPredicted RBP18.72■□□□□ 0.59
CLIP3-206ENST00000593074 SLC6A20Q9NP91 592 aa18.72■□□□□ 0.59
CLIP3-206ENST00000593074 MRPS30Q9NP92 439 aaKnown RBP18.72■□□□□ 0.59
CLIP3-206ENST00000593074 A4GALTQ9NPC4 353 aa18.72■□□□□ 0.59
CLIP3-206ENST00000593074 PRDM8Q9NQV8 689 aa18.72■□□□□ 0.59
CLIP3-206ENST00000593074 SIRT3Q9NTG7 399 aaPredicted RBP18.72■□□□□ 0.59
CLIP3-206ENST00000593074 TAS2R7Q9NYW3 318 aa18.72■□□□□ 0.59
CLIP3-206ENST00000593074 TESMINQ9Y4I5 508 aa18.72■□□□□ 0.59
CLIP3-206ENST00000593074 DGKBQ9Y6T7 804 aa18.72■□□□□ 0.59
CLIP3-206ENST00000593074 PRSS38A1L453 326 aa18.71■□□□□ 0.59
CLIP3-206ENST00000593074 ITGA2P17301 1181 aa18.71■□□□□ 0.59
CLIP3-206ENST00000593074 JUNDP17535 347 aa18.71■□□□□ 0.59
CLIP3-206ENST00000593074 EPHA2P29317 976 aa18.71■□□□□ 0.59
CLIP3-206ENST00000593074 BCL6P41182 706 aa18.71■□□□□ 0.59
CLIP3-206ENST00000593074 CLDN2P57739 230 aa18.71■□□□□ 0.59
CLIP3-206ENST00000593074 CXCR4P61073 352 aa18.71■□□□□ 0.59
CLIP3-206ENST00000593074 ABATP80404 500 aa18.71■□□□□ 0.59
CLIP3-206ENST00000593074 ZIC1Q15915 447 aa18.71■□□□□ 0.59
CLIP3-206ENST00000593074 CEACAM20Q6UY09 585 aa18.71■□□□□ 0.59
CLIP3-206ENST00000593074 B3GNT8Q7Z7M8 397 aa18.71■□□□□ 0.59
CLIP3-206ENST00000593074 ARMC8Q8IUR7 673 aa18.71■□□□□ 0.59
CLIP3-206ENST00000593074 PSMA8Q8TAA3 256 aa18.71■□□□□ 0.59
CLIP3-206ENST00000593074 LHPPQ9H008 270 aa18.71■□□□□ 0.59
CLIP3-206ENST00000593074 ACSS1Q9NUB1 689 aaPredicted RBP18.71■□□□□ 0.59
CLIP3-206ENST00000593074 C5AR2Q9P296 337 aa18.71■□□□□ 0.59
CLIP3-206ENST00000593074 COL4A2P08572 1712 aa18.71■□□□□ 0.59
CLIP3-206ENST00000593074 TNFRSF11BO00300 401 aa18.7■□□□□ 0.58
CLIP3-206ENST00000593074 DNAJB5O75953 348 aa18.7■□□□□ 0.58
CLIP3-206ENST00000593074 ATE1O95260 518 aa18.7■□□□□ 0.58
CLIP3-206ENST00000593074 MATN1P21941 496 aa18.7■□□□□ 0.58
CLIP3-206ENST00000593074 OR1E2P47887 323 aa18.7■□□□□ 0.58
CLIP3-206ENST00000593074 NUP107P57740 925 aa18.7■□□□□ 0.58
CLIP3-206ENST00000593074 KIAA1024LP59773 190 aa18.7■□□□□ 0.58
CLIP3-206ENST00000593074 NPRL3Q12980 569 aa18.7■□□□□ 0.58
CLIP3-206ENST00000593074 MLC1Q15049 377 aa18.7■□□□□ 0.58
CLIP3-206ENST00000593074 ADPRMQ3LIE5 342 aa18.7■□□□□ 0.58
CLIP3-206ENST00000593074 REEP3Q6NUK4 255 aa18.7■□□□□ 0.58
CLIP3-206ENST00000593074 DHRS4L2Q6PKH6 230 aa18.7■□□□□ 0.58
CLIP3-206ENST00000593074 TMEM92Q6UXU6 159 aa18.7■□□□□ 0.58
CLIP3-206ENST00000593074 HORMAD2Q8N7B1 307 aa18.7■□□□□ 0.58
CLIP3-206ENST00000593074 AMER3Q8N944 861 aa18.7■□□□□ 0.58
CLIP3-206ENST00000593074 BPIFB6Q8NFQ5 453 aa18.7■□□□□ 0.58
CLIP3-206ENST00000593074 OR2L3Q8NG85 312 aa18.7■□□□□ 0.58
CLIP3-206ENST00000593074 OR2M4Q96R27 311 aa18.7■□□□□ 0.58
CLIP3-206ENST00000593074 NODALQ96S42 347 aa18.7■□□□□ 0.58
CLIP3-206ENST00000593074 SARGQ9BW04 601 aa18.7■□□□□ 0.58
CLIP3-206ENST00000593074 NAA50Q9GZZ1 169 aaKnown RBP18.7■□□□□ 0.58
CLIP3-206ENST00000593074 TMEM184CQ9NVA4 438 aa18.7■□□□□ 0.58
CLIP3-206ENST00000593074 EHD3Q9NZN3 535 aa18.7■□□□□ 0.58
CLIP3-206ENST00000593074 SCHIP1Q9P0W5 487 aaPredicted RBP18.7■□□□□ 0.58
CLIP3-206ENST00000593074 HEBP2Q9Y5Z4 205 aa18.7■□□□□ 0.58
CLIP3-206ENST00000593074 SCAMP1O15126 338 aa18.7■□□□□ 0.58
CLIP3-206ENST00000593074 NDUFV2P19404 249 aa18.7■□□□□ 0.58
CLIP3-206ENST00000593074 PCMT1P22061 227 aa18.7■□□□□ 0.58
CLIP3-206ENST00000593074 IGFBP4P22692 258 aa18.7■□□□□ 0.58
CLIP3-206ENST00000593074 PEBP1P30086 187 aaKnown RBP18.7■□□□□ 0.58
CLIP3-206ENST00000593074 ACSL1P33121 698 aa18.7■□□□□ 0.58
CLIP3-206ENST00000593074 GRK3P35626 688 aa18.7■□□□□ 0.58
CLIP3-206ENST00000593074 SSR2P43308 183 aa18.7■□□□□ 0.58
CLIP3-206ENST00000593074 PLA2G16P53816 162 aa18.7■□□□□ 0.58
CLIP3-206ENST00000593074 TMBIM6P55061 237 aa18.7■□□□□ 0.58
CLIP3-206ENST00000593074 FBXO43Q4G163 708 aa18.7■□□□□ 0.58
CLIP3-206ENST00000593074 ZNF793Q6ZN11 406 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms