RNA–Protein interactions for RNA: ENST00000586119.1

LIG3-207, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-207ENST00000586119 SCYL1Q96KG9 808 aa10.78□□□□□ -0.68
LIG3-207ENST00000586119 RASL10BQ96S79 203 aa10.78□□□□□ -0.68
LIG3-207ENST00000586119 EGFL8Q99944 293 aa10.78□□□□□ -0.68
LIG3-207ENST00000586119 ZNF559Q9BR84 538 aa10.78□□□□□ -0.68
LIG3-207ENST00000586119 LRRC1Q9BTT6 524 aa10.78□□□□□ -0.68
LIG3-207ENST00000586119 CNPPD1Q9BV87 410 aa10.78□□□□□ -0.68
LIG3-207ENST00000586119 TTTY12Q9BZ98 90 aa10.78□□□□□ -0.68
LIG3-207ENST00000586119 CLK4Q9HAZ1 481 aaKnown RBP10.78□□□□□ -0.68
LIG3-207ENST00000586119 TIMMDC1Q9NPL8 285 aa10.78□□□□□ -0.68
LIG3-207ENST00000586119 HPF1Q9NWY4 346 aa10.78□□□□□ -0.68
LIG3-207ENST00000586119 MYOTQ9UBF9 498 aa10.78□□□□□ -0.68
LIG3-207ENST00000586119 FAM215AQ9Y5M1 114 aa10.78□□□□□ -0.68
LIG3-207ENST00000586119 A0A0G2JNJ9 132 aa10.77□□□□□ -0.69
LIG3-207ENST00000586119 KLK8O60259 260 aa10.77□□□□□ -0.69
LIG3-207ENST00000586119 LDB3O75112 727 aa10.77□□□□□ -0.69
LIG3-207ENST00000586119 H2AFYO75367 372 aaKnown RBP10.77□□□□□ -0.69
LIG3-207ENST00000586119 SH3BGRLO75368 114 aa10.77□□□□□ -0.69
LIG3-207ENST00000586119 GLSO94925 669 aaPredicted RBP10.77□□□□□ -0.69
LIG3-207ENST00000586119 SEC31AO94979 1220 aaKnown RBP10.77□□□□□ -0.69
LIG3-207ENST00000586119 NADKO95544 446 aaPredicted RBP10.77□□□□□ -0.69
LIG3-207ENST00000586119 IFNA16P05015 189 aa10.77□□□□□ -0.69
LIG3-207ENST00000586119 GLI4P10075 376 aa10.77□□□□□ -0.69
LIG3-207ENST00000586119 CNR1P21554 472 aa10.77□□□□□ -0.69
LIG3-207ENST00000586119 ADH7P40394 386 aa10.77□□□□□ -0.69
LIG3-207ENST00000586119 MAGEA5P43359 124 aa10.77□□□□□ -0.69
LIG3-207ENST00000586119 SLC6A12P48065 614 aa10.77□□□□□ -0.69
LIG3-207ENST00000586119 IST1P53990 364 aa10.77□□□□□ -0.69
LIG3-207ENST00000586119 LIM2P55344 173 aa10.77□□□□□ -0.69
LIG3-207ENST00000586119 HSD17B7P56937 341 aa10.77□□□□□ -0.69
LIG3-207ENST00000586119 CBLBQ13191 982 aa10.77□□□□□ -0.69
LIG3-207ENST00000586119 TMIGD1Q6UXZ0 262 aa10.77□□□□□ -0.69
LIG3-207ENST00000586119 UBE3DQ7Z6J8 389 aa10.77□□□□□ -0.69
LIG3-207ENST00000586119 GALNT7Q86SF2 657 aa10.77□□□□□ -0.69
LIG3-207ENST00000586119 TMEM200AQ86VY9 491 aa10.77□□□□□ -0.69
LIG3-207ENST00000586119 ZC3HC1Q86WB0 502 aaKnown RBP10.77□□□□□ -0.69
LIG3-207ENST00000586119 EID3Q8N140 333 aa10.77□□□□□ -0.69
LIG3-207ENST00000586119 NOA1Q8NC60 698 aaKnown RBP10.77□□□□□ -0.69
LIG3-207ENST00000586119 GAL3ST3Q96A11 431 aa10.77□□□□□ -0.69
LIG3-207ENST00000586119 F2RL3Q96RI0 385 aa10.77□□□□□ -0.69
LIG3-207ENST00000586119 CCDC77Q9BR77 488 aa10.77□□□□□ -0.69
LIG3-207ENST00000586119 TTYH2Q9BSA4 534 aa10.77□□□□□ -0.69
LIG3-207ENST00000586119 TMEM79Q9BSE2 394 aa10.77□□□□□ -0.69
LIG3-207ENST00000586119 ALOXE3Q9BYJ1 711 aa10.77□□□□□ -0.69
LIG3-207ENST00000586119 OR8D2Q9GZM6 311 aa10.77□□□□□ -0.69
LIG3-207ENST00000586119 ZDHHC11Q9H8X9 412 aa10.77□□□□□ -0.69
LIG3-207ENST00000586119 PRDM7Q9NQW5 492 aa10.77□□□□□ -0.69
LIG3-207ENST00000586119 SMYD2Q9NRG4 433 aa10.77□□□□□ -0.69
LIG3-207ENST00000586119 Q9UFV3 132 aa10.77□□□□□ -0.69
LIG3-207ENST00000586119 SNX24Q9Y343 169 aa10.77□□□□□ -0.69
LIG3-207ENST00000586119 OARD1Q9Y530 152 aa10.77□□□□□ -0.69
LIG3-207ENST00000586119 TEX264Q9Y6I9 313 aa10.77□□□□□ -0.69
LIG3-207ENST00000586119 KIAA1549Q9HCM3 1950 aa10.77□□□□□ -0.69
LIG3-207ENST00000586119 ACANP16112 2415 aa10.77□□□□□ -0.69
LIG3-207ENST00000586119 ABCA4P78363 2273 aa10.76□□□□□ -0.69
LIG3-207ENST00000586119 FAM95CA0A1B0GW59 222 aa10.76□□□□□ -0.69
LIG3-207ENST00000586119 ATP6AP2A0A1C7CYW4 349 aa10.76□□□□□ -0.69
LIG3-207ENST00000586119 RTCAO00442 366 aaKnown RBP10.76□□□□□ -0.69
LIG3-207ENST00000586119 B3GALT2O43825 422 aa10.76□□□□□ -0.69
LIG3-207ENST00000586119 ATP6AP2O75787 350 aa10.76□□□□□ -0.69
LIG3-207ENST00000586119 ETHE1O95571 254 aa10.76□□□□□ -0.69
LIG3-207ENST00000586119 CCL3P10147 92 aa10.76□□□□□ -0.69
LIG3-207ENST00000586119 CD22P20273 847 aa10.76□□□□□ -0.69
LIG3-207ENST00000586119 PIGAP37287 484 aa10.76□□□□□ -0.69
LIG3-207ENST00000586119 RPL21P46778 160 aaKnown RBP10.76□□□□□ -0.69
LIG3-207ENST00000586119 STXBP1P61764 594 aaKnown RBP10.76□□□□□ -0.69
LIG3-207ENST00000586119 FOXO1Q12778 655 aa10.76□□□□□ -0.69
LIG3-207ENST00000586119 FASTKD3Q14CZ7 662 aaKnown RBP10.76□□□□□ -0.69
LIG3-207ENST00000586119 STEAP4Q687X5 459 aa10.76□□□□□ -0.69
LIG3-207ENST00000586119 ABHD17CQ6PCB6 329 aa10.76□□□□□ -0.69
LIG3-207ENST00000586119 ZNF793Q6ZN11 406 aa10.76□□□□□ -0.69
LIG3-207ENST00000586119 DGAT2L6Q6ZPD8 337 aa10.76□□□□□ -0.69
LIG3-207ENST00000586119 TRILQ7L0X0 811 aa10.76□□□□□ -0.69
LIG3-207ENST00000586119 OR4N5Q8IXE1 308 aa10.76□□□□□ -0.69
LIG3-207ENST00000586119 POM121Q96HA1 1249 aa10.76□□□□□ -0.69
LIG3-207ENST00000586119 SMC6Q96SB8 1091 aa10.76□□□□□ -0.69
LIG3-207ENST00000586119 MAPKAP1Q9BPZ7 522 aa10.76□□□□□ -0.69
LIG3-207ENST00000586119 NPLQ9BXD5 320 aaPredicted RBP10.76□□□□□ -0.69
LIG3-207ENST00000586119 ADAP2Q9NPF8 381 aa10.76□□□□□ -0.69
LIG3-207ENST00000586119 ALKBH4Q9NXW9 302 aa10.76□□□□□ -0.69
LIG3-207ENST00000586119 TUBA8Q9NY65 449 aaPredicted RBP10.76□□□□□ -0.69
LIG3-207ENST00000586119 CTNNAL1Q9UBT7 734 aa10.76□□□□□ -0.69
LIG3-207ENST00000586119 DAPP1Q9UN19 280 aa10.76□□□□□ -0.69
LIG3-207ENST00000586119 NF1P21359 2839 aa10.76□□□□□ -0.69
LIG3-207ENST00000586119 MED12Q93074 2177 aa10.75□□□□□ -0.69
LIG3-207ENST00000586119 WASHC1A8K0Z3 465 aa10.75□□□□□ -0.69
LIG3-207ENST00000586119 KDM4EB2RXH2 506 aaPredicted RBP10.75□□□□□ -0.69
LIG3-207ENST00000586119 HRKO00198 91 aa10.75□□□□□ -0.69
LIG3-207ENST00000586119 CLDN4O14493 209 aa10.75□□□□□ -0.69
LIG3-207ENST00000586119 TP73O15350 636 aa10.75□□□□□ -0.69
LIG3-207ENST00000586119 CTNSO60931 367 aa10.75□□□□□ -0.69
LIG3-207ENST00000586119 SLU7O95391 586 aaKnown RBP10.75□□□□□ -0.69
LIG3-207ENST00000586119 RFPL3SP0C7P2 107 aa10.75□□□□□ -0.69
LIG3-207ENST00000586119 GNAZP19086 355 aa10.75□□□□□ -0.69
LIG3-207ENST00000586119 TNNI3P19429 210 aa10.75□□□□□ -0.69
LIG3-207ENST00000586119 ENDOUP21128 410 aaKnown RBP10.75□□□□□ -0.69
LIG3-207ENST00000586119 ACVR2AP27037 513 aa10.75□□□□□ -0.69
LIG3-207ENST00000586119 HSPA7P48741 367 aa10.75□□□□□ -0.69
LIG3-207ENST00000586119 RNF4P78317 190 aa10.75□□□□□ -0.69
LIG3-207ENST00000586119 CDKL1Q00532 357 aa10.75□□□□□ -0.69
LIG3-207ENST00000586119 MYBPHQ13203 477 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms