RNA–Protein interactions for RNA: ENST00000586058.1

LIG3-206, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-206ENST00000586058 RPLP0P05388 317 aaKnown RBP5.87□□□□□ -1.47
LIG3-206ENST00000586058 ZCCHC18P0CG32 403 aa5.87□□□□□ -1.47
LIG3-206ENST00000586058 PIM1P11309 404 aaPredicted RBP5.87□□□□□ -1.47
LIG3-206ENST00000586058 FCGR1AP12314 374 aa5.87□□□□□ -1.47
LIG3-206ENST00000586058 ENGP17813 658 aa5.87□□□□□ -1.47
LIG3-206ENST00000586058 IL1RNP18510 177 aa5.87□□□□□ -1.47
LIG3-206ENST00000586058 CSNK2A2P19784 350 aaPredicted RBP5.87□□□□□ -1.47
LIG3-206ENST00000586058 IL10P22301 178 aa5.87□□□□□ -1.47
LIG3-206ENST00000586058 UQCRC2P22695 453 aa5.87□□□□□ -1.47
LIG3-206ENST00000586058 HTR1EP28566 365 aa5.87□□□□□ -1.47
LIG3-206ENST00000586058 MPIP34949 423 aa5.87□□□□□ -1.47
LIG3-206ENST00000586058 PRIM2P49643 509 aa5.87□□□□□ -1.47
LIG3-206ENST00000586058 MAPK10P53779 464 aa5.87□□□□□ -1.47
LIG3-206ENST00000586058 ARSFP54793 590 aa5.87□□□□□ -1.47
LIG3-206ENST00000586058 GFERP55789 205 aa5.87□□□□□ -1.47
LIG3-206ENST00000586058 SESN3P58005 492 aa5.87□□□□□ -1.47
LIG3-206ENST00000586058 OR1D5P58170 312 aa5.87□□□□□ -1.47
LIG3-206ENST00000586058 YBX1P67809 324 aaKnown RBP5.87□□□□□ -1.47
LIG3-206ENST00000586058 TXNL4AP83876 142 aaKnown RBP5.87□□□□□ -1.47
LIG3-206ENST00000586058 HPCAP84074 193 aa5.87□□□□□ -1.47
LIG3-206ENST00000586058 LIPEQ05469 1076 aa5.87□□□□□ -1.47
LIG3-206ENST00000586058 ABHD18Q0P651 414 aa5.87□□□□□ -1.47
LIG3-206ENST00000586058 HSPB3Q12988 150 aa5.87□□□□□ -1.47
LIG3-206ENST00000586058 TP53BP2Q13625 1128 aa5.87□□□□□ -1.47
LIG3-206ENST00000586058 GNA13Q14344 377 aa5.87□□□□□ -1.47
LIG3-206ENST00000586058 RCN1Q15293 331 aa5.87□□□□□ -1.47
LIG3-206ENST00000586058 TLR1Q15399 786 aa5.87□□□□□ -1.47
LIG3-206ENST00000586058 DEFB134Q4QY38 66 aa5.87□□□□□ -1.47
LIG3-206ENST00000586058 INTS11Q5TA45 600 aaKnown RBP5.87□□□□□ -1.47
LIG3-206ENST00000586058 YOD1Q5VVQ6 348 aaPredicted RBP5.87□□□□□ -1.47
LIG3-206ENST00000586058 FBXW10Q5XX13 1052 aa5.87□□□□□ -1.47
LIG3-206ENST00000586058 ANKRD26P1Q6NSI1 321 aa5.87□□□□□ -1.47
LIG3-206ENST00000586058 NANOGP8Q6NSW7 305 aa5.87□□□□□ -1.47
LIG3-206ENST00000586058 TMEM71Q6P5X7 295 aa5.87□□□□□ -1.47
LIG3-206ENST00000586058 TLDC1Q6P9B6 456 aa5.87□□□□□ -1.47
LIG3-206ENST00000586058 PRR23CQ6ZRP0 262 aa5.87□□□□□ -1.47
LIG3-206ENST00000586058 MCATQ8IVS2 390 aaKnown RBP5.87□□□□□ -1.47
LIG3-206ENST00000586058 SLC25A45Q8N413 288 aa5.87□□□□□ -1.47
LIG3-206ENST00000586058 KCT2Q8NC54 265 aa5.87□□□□□ -1.47
LIG3-206ENST00000586058 FLVCR1-AS1Q8TAF5 88 aa5.87□□□□□ -1.47
LIG3-206ENST00000586058 IFI44Q8TCB0 444 aa5.87□□□□□ -1.47
LIG3-206ENST00000586058 UTP15Q8TED0 518 aaKnown RBP5.87□□□□□ -1.47
LIG3-206ENST00000586058 OR5P2Q8WZ92 322 aa5.87□□□□□ -1.47
LIG3-206ENST00000586058 GTF2H4Q92759 462 aa5.87□□□□□ -1.47
LIG3-206ENST00000586058 UTP4Q969X6 686 aaKnown RBP5.87□□□□□ -1.47
LIG3-206ENST00000586058 TMEM125Q96AQ2 219 aa5.87□□□□□ -1.47
LIG3-206ENST00000586058 PPWD1Q96BP3 646 aaKnown RBP5.87□□□□□ -1.47
LIG3-206ENST00000586058 COQ8BQ96D53 544 aa5.87□□□□□ -1.47
LIG3-206ENST00000586058 MVB12AQ96EY5 273 aa5.87□□□□□ -1.47
LIG3-206ENST00000586058 C11orf24Q96F05 449 aaPredicted RBP5.87□□□□□ -1.47
LIG3-206ENST00000586058 SLC35G5Q96KT7 338 aa5.87□□□□□ -1.47
LIG3-206ENST00000586058 NSMCE2Q96MF7 247 aa5.87□□□□□ -1.47
LIG3-206ENST00000586058 TMEM74Q96NL1 305 aa5.87□□□□□ -1.47
LIG3-206ENST00000586058 OR2A5Q96R48 311 aa5.87□□□□□ -1.47
LIG3-206ENST00000586058 NRTNQ99748 197 aa5.87□□□□□ -1.47
LIG3-206ENST00000586058 SLC39A3Q9BRY0 314 aa5.87□□□□□ -1.47
LIG3-206ENST00000586058 SORBS1Q9BX66 1292 aaKnown RBP5.87□□□□□ -1.47
LIG3-206ENST00000586058 ASPSCR1Q9BZE9 553 aa5.87□□□□□ -1.47
LIG3-206ENST00000586058 CHRNA10Q9GZZ6 450 aa5.87□□□□□ -1.47
LIG3-206ENST00000586058 ARRDC1-AS1Q9H2J1 176 aa5.87□□□□□ -1.47
LIG3-206ENST00000586058 DENND2DQ9H6A0 471 aaPredicted RBP5.87□□□□□ -1.47
LIG3-206ENST00000586058 NANOGQ9H9S0 305 aa5.87□□□□□ -1.47
LIG3-206ENST00000586058 RNPEPL1Q9HAU8 725 aa5.87□□□□□ -1.47
LIG3-206ENST00000586058 CLK4Q9HAZ1 481 aaKnown RBP5.87□□□□□ -1.47
LIG3-206ENST00000586058 C3orf14Q9HBI5 128 aa5.87□□□□□ -1.47
LIG3-206ENST00000586058 CAPN10Q9HC96 672 aa5.87□□□□□ -1.47
LIG3-206ENST00000586058 LYRM4Q9HD34 91 aa5.87□□□□□ -1.47
LIG3-206ENST00000586058 ACSS1Q9NUB1 689 aaPredicted RBP5.87□□□□□ -1.47
LIG3-206ENST00000586058 THUMPD1Q9NXG2 353 aaKnown RBP5.87□□□□□ -1.47
LIG3-206ENST00000586058 NCDNQ9UBB6 729 aa5.87□□□□□ -1.47
LIG3-206ENST00000586058 NDOR1Q9UHB4 597 aa5.87□□□□□ -1.47
LIG3-206ENST00000586058 SERTAD3Q9UJW9 196 aa5.87□□□□□ -1.47
LIG3-206ENST00000586058 PILRAQ9UKJ1 303 aa5.87□□□□□ -1.47
LIG3-206ENST00000586058 CDC14AQ9UNH5 594 aa5.87□□□□□ -1.47
LIG3-206ENST00000586058 ANGPT4Q9Y264 503 aa5.87□□□□□ -1.47
LIG3-206ENST00000586058 NAALAD2Q9Y3Q0 740 aa5.87□□□□□ -1.47
LIG3-206ENST00000586058 PCDHGB2Q9Y5G2 931 aa5.87□□□□□ -1.47
LIG3-206ENST00000586058 SLC22A7Q9Y694 548 aa5.87□□□□□ -1.47
LIG3-206ENST00000586058 GOLGA4Q13439 2230 aaKnown RBP5.87□□□□□ -1.47
LIG3-206ENST00000586058 UNC13CQ8NB66 2214 aa5.87□□□□□ -1.47
LIG3-206ENST00000586058 NUP214P35658 2090 aaPredicted RBP5.86□□□□□ -1.47
LIG3-206ENST00000586058 EME2A4GXA9 379 aaPredicted RBP5.86□□□□□ -1.47
LIG3-206ENST00000586058 ASPDHA6ND91 283 aa5.86□□□□□ -1.47
LIG3-206ENST00000586058 PRORSD1PA6NEY8 169 aa5.86□□□□□ -1.47
LIG3-206ENST00000586058 AQP12BA6NM10 295 aa5.86□□□□□ -1.47
LIG3-206ENST00000586058 A8MU76 341 aa5.86□□□□□ -1.47
LIG3-206ENST00000586058 A8MUI8 341 aa5.86□□□□□ -1.47
LIG3-206ENST00000586058 PATE3B3GLJ2 98 aa5.86□□□□□ -1.47
LIG3-206ENST00000586058 FXYD1O00168 92 aa5.86□□□□□ -1.47
LIG3-206ENST00000586058 ARPC2O15144 300 aa5.86□□□□□ -1.47
LIG3-206ENST00000586058 SIGLEC6O43699 453 aa5.86□□□□□ -1.47
LIG3-206ENST00000586058 TMPRSS11DO60235 418 aa5.86□□□□□ -1.47
LIG3-206ENST00000586058 CTSVO60911 334 aa5.86□□□□□ -1.47
LIG3-206ENST00000586058 ENTPD5O75356 428 aa5.86□□□□□ -1.47
LIG3-206ENST00000586058 BCAS2O75934 225 aaPredicted RBP5.86□□□□□ -1.47
LIG3-206ENST00000586058 KLHL18O94889 574 aa5.86□□□□□ -1.47
LIG3-206ENST00000586058 NSA2O95478 260 aaKnown RBP5.86□□□□□ -1.47
LIG3-206ENST00000586058 LDOC1O95751 146 aaPredicted RBP5.86□□□□□ -1.47
LIG3-206ENST00000586058 BAG2O95816 211 aa5.86□□□□□ -1.47
LIG3-206ENST00000586058 AIFM1O95831 613 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms