RNA–Protein interactions for RNA: ENST00000584773.5

SRSF1-208, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 5 BASIC

Gene SRSF1, Length 1,317 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-208ENST00000584773 SLC25A12O75746 678 aa16.79■□□□□ 0.28
SRSF1-208ENST00000584773 ETHE1O95571 254 aa16.79■□□□□ 0.28
SRSF1-208ENST00000584773 IFNA16P05015 189 aa16.79■□□□□ 0.28
SRSF1-208ENST00000584773 HPDP32754 393 aaPredicted RBP16.79■□□□□ 0.28
SRSF1-208ENST00000584773 CLCN2P51788 898 aa16.79■□□□□ 0.28
SRSF1-208ENST00000584773 PCBP2Q15366 365 aaKnown RBP eCLIP16.79■□□□□ 0.288e-10■■□□□ 12.9
SRSF1-208ENST00000584773 CPSF6Q16630 551 aaKnown RBP eCLIP16.79■□□□□ 0.28
SRSF1-208ENST00000584773 DEPDC1Q5TB30 811 aa16.79■□□□□ 0.28
SRSF1-208ENST00000584773 ZNF787Q6DD87 383 aa16.79■□□□□ 0.28
SRSF1-208ENST00000584773 SLC25A25Q6KCM7 469 aa16.79■□□□□ 0.28
SRSF1-208ENST00000584773 CEP128Q6ZU80 1094 aa16.79■□□□□ 0.28
SRSF1-208ENST00000584773 MAMDC2Q7Z304 686 aaPredicted RBP16.79■□□□□ 0.28
SRSF1-208ENST00000584773 OR4N5Q8IXE1 308 aa16.79■□□□□ 0.28
SRSF1-208ENST00000584773 LRRN4CLQ8ND94 238 aa16.79■□□□□ 0.28
SRSF1-208ENST00000584773 DNAJB8Q8NHS0 232 aa16.79■□□□□ 0.28
SRSF1-208ENST00000584773 CMTM7Q96FZ5 175 aa16.79■□□□□ 0.28
SRSF1-208ENST00000584773 VMP1Q96GC9 406 aa16.79■□□□□ 0.28
SRSF1-208ENST00000584773 SCYL1Q96KG9 808 aa16.79■□□□□ 0.28
SRSF1-208ENST00000584773 NSUN5Q96P11 429 aaKnown RBP16.79■□□□□ 0.28
SRSF1-208ENST00000584773 ALOXE3Q9BYJ1 711 aa16.79■□□□□ 0.28
SRSF1-208ENST00000584773 IPPKQ9H8X2 491 aa16.79■□□□□ 0.28
SRSF1-208ENST00000584773 LYRM4Q9HD34 91 aa16.79■□□□□ 0.28
SRSF1-208ENST00000584773 ADAP2Q9NPF8 381 aa16.79■□□□□ 0.28
SRSF1-208ENST00000584773 ASPDHA6ND91 283 aa16.78■□□□□ 0.28
SRSF1-208ENST00000584773 TMEM200CA6NKL6 621 aa16.78■□□□□ 0.28
SRSF1-208ENST00000584773 OR7A17O14581 309 aa16.78■□□□□ 0.28
SRSF1-208ENST00000584773 SCELO95171 688 aa16.78■□□□□ 0.28
SRSF1-208ENST00000584773 MYBL2P10244 700 aa16.78■□□□□ 0.28
SRSF1-208ENST00000584773 NEK2P51955 445 aa16.78■□□□□ 0.28
SRSF1-208ENST00000584773 TERF2Q15554 542 aa16.78■□□□□ 0.28
SRSF1-208ENST00000584773 AP5B1Q2VPB7 878 aa16.78■□□□□ 0.28
SRSF1-208ENST00000584773 TMEM35AQ53FP2 167 aa16.78■□□□□ 0.28
SRSF1-208ENST00000584773 GLE1Q53GS7 698 aaKnown RBP16.78■□□□□ 0.28
SRSF1-208ENST00000584773 RNFT1Q5M7Z0 435 aa16.78■□□□□ 0.28
SRSF1-208ENST00000584773 OR4C11Q6IEV9 310 aa16.78■□□□□ 0.28
SRSF1-208ENST00000584773 CHSY3Q70JA7 882 aa16.78■□□□□ 0.28
SRSF1-208ENST00000584773 CPSF7Q8N684 471 aaKnown RBP16.78■□□□□ 0.28
SRSF1-208ENST00000584773 TMEM178AQ8NBL3 297 aa16.78■□□□□ 0.28
SRSF1-208ENST00000584773 OR52B6Q8NGF0 335 aa16.78■□□□□ 0.28
SRSF1-208ENST00000584773 DOK4Q8TEW6 326 aa16.78■□□□□ 0.28
SRSF1-208ENST00000584773 PTPMT1Q8WUK0 201 aaPredicted RBP16.78■□□□□ 0.28
SRSF1-208ENST00000584773 ANKRD9Q96BM1 317 aaPredicted RBP16.78■□□□□ 0.28
SRSF1-208ENST00000584773 ROGDIQ9GZN7 287 aa16.78■□□□□ 0.28
SRSF1-208ENST00000584773 NOL11Q9H8H0 719 aaKnown RBP16.78■□□□□ 0.28
SRSF1-208ENST00000584773 PPIEQ9UNP9 301 aaKnown RBP16.78■□□□□ 0.28
SRSF1-208ENST00000584773 PCDHGB6Q9Y5F9 930 aa16.78■□□□□ 0.28
SRSF1-208ENST00000584773 TRGV8A0A0C4DH27 118 aa16.77■□□□□ 0.28
SRSF1-208ENST00000584773 WASHC1A8K0Z3 465 aa16.77■□□□□ 0.28
SRSF1-208ENST00000584773 NPIPA5E9PKD4 350 aa16.77■□□□□ 0.28
SRSF1-208ENST00000584773 FGF17O60258 216 aa16.77■□□□□ 0.28
SRSF1-208ENST00000584773 NME2P1O60361 137 aa16.77■□□□□ 0.28
SRSF1-208ENST00000584773 ITGA10O75578 1167 aa16.77■□□□□ 0.28
SRSF1-208ENST00000584773 NME2P22392 152 aa16.77■□□□□ 0.28
SRSF1-208ENST00000584773 CPN2P22792 545 aa16.77■□□□□ 0.28
SRSF1-208ENST00000584773 GCAP28676 217 aa16.77■□□□□ 0.28
SRSF1-208ENST00000584773 TRHRP34981 398 aaPredicted RBP16.77■□□□□ 0.28
SRSF1-208ENST00000584773 RFC3P40938 356 aa16.77■□□□□ 0.28
SRSF1-208ENST00000584773 CYB561P49447 251 aa16.77■□□□□ 0.28
SRSF1-208ENST00000584773 HLCSP50747 726 aa16.77■□□□□ 0.28
SRSF1-208ENST00000584773 RAP1GDS1P52306 607 aa16.77■□□□□ 0.28
SRSF1-208ENST00000584773 HNRNPH2P55795 449 aaKnown RBP16.77■□□□□ 0.28
SRSF1-208ENST00000584773 HSF1Q00613 529 aa16.77■□□□□ 0.28
SRSF1-208ENST00000584773 ALDH6A1Q02252 535 aaKnown RBP16.77■□□□□ 0.28
SRSF1-208ENST00000584773 STX4Q12846 297 aa16.77■□□□□ 0.28
SRSF1-208ENST00000584773 SLAMF1Q13291 335 aa16.77■□□□□ 0.28
SRSF1-208ENST00000584773 ELAVL1Q15717 326 aaKnown RBP16.77■□□□□ 0.28
SRSF1-208ENST00000584773 LIPJQ5W064 366 aa16.77■□□□□ 0.28
SRSF1-208ENST00000584773 C18orf63Q68DL7 685 aa16.77■□□□□ 0.28
SRSF1-208ENST00000584773 ARMC10Q8N2F6 343 aa16.77■□□□□ 0.28
SRSF1-208ENST00000584773 SRFBP1Q8NEF9 429 aaKnown RBP16.77■□□□□ 0.28
SRSF1-208ENST00000584773 KIF18AQ8NI77 898 aa16.77■□□□□ 0.28
SRSF1-208ENST00000584773 UCN3Q969E3 161 aa16.77■□□□□ 0.28
SRSF1-208ENST00000584773 MTFMTQ96DP5 389 aaKnown RBP16.77■□□□□ 0.28
SRSF1-208ENST00000584773 ZNF717Q9BY31 904 aaPredicted RBP16.77■□□□□ 0.28
SRSF1-208ENST00000584773 ZBTB26Q9HCK0 441 aa16.77■□□□□ 0.28
SRSF1-208ENST00000584773 NPIPA1Q9UND3 350 aa16.77■□□□□ 0.28
SRSF1-208ENST00000584773 IKBKGQ9Y6K9 419 aa16.77■□□□□ 0.28
SRSF1-208ENST00000584773 A0A087WUV0 522 aaPredicted RBP16.76■□□□□ 0.27
SRSF1-208ENST00000584773 A0A1B0GTL3 188 aa16.76■□□□□ 0.27
SRSF1-208ENST00000584773 FCHO1O14526 889 aa16.76■□□□□ 0.27
SRSF1-208ENST00000584773 EEDO75530 441 aaKnown RBP16.76■□□□□ 0.27
SRSF1-208ENST00000584773 SBK3P0C264 359 aa16.76■□□□□ 0.27
SRSF1-208ENST00000584773 FAM153BP0C7A2 387 aa16.76■□□□□ 0.27
SRSF1-208ENST00000584773 RHOXF2BP0C7M4 288 aa16.76■□□□□ 0.27
SRSF1-208ENST00000584773 SERPINB1P30740 379 aa16.76■□□□□ 0.27
SRSF1-208ENST00000584773 ARL1P40616 181 aaPredicted RBP16.76■□□□□ 0.27
SRSF1-208ENST00000584773 SERPINB9P50453 376 aa16.76■□□□□ 0.27
SRSF1-208ENST00000584773 ZRSR2Q15696 482 aaKnown RBP16.76■□□□□ 0.27
SRSF1-208ENST00000584773 FAM153CQ494X1 144 aa16.76■□□□□ 0.27
SRSF1-208ENST00000584773 DGAT2L6Q6ZPD8 337 aa16.76■□□□□ 0.27
SRSF1-208ENST00000584773 MDGA2Q7Z553 956 aa16.76■□□□□ 0.27
SRSF1-208ENST00000584773 SIAH3Q8IW03 269 aa16.76■□□□□ 0.27
SRSF1-208ENST00000584773 GSPT2Q8IYD1 628 aaKnown RBP16.76■□□□□ 0.27
SRSF1-208ENST00000584773 WDR20Q8TBZ3 569 aa16.76■□□□□ 0.27
SRSF1-208ENST00000584773 RGMAQ96B86 450 aa16.76■□□□□ 0.27
SRSF1-208ENST00000584773 RHOXF2Q9BQY4 288 aa16.76■□□□□ 0.27
SRSF1-208ENST00000584773 OR8D2Q9GZM6 311 aa16.76■□□□□ 0.27
SRSF1-208ENST00000584773 TSPYL1Q9H0U9 437 aa16.76■□□□□ 0.27
SRSF1-208ENST00000584773 TRIM45Q9H8W5 580 aaPredicted RBP16.76■□□□□ 0.27
SRSF1-208ENST00000584773 VTI1BQ9UEU0 232 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms