RNA–Protein interactions for RNA: ENST00000583344.1

SMCHD1-208, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 738 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-208ENST00000583344 TCP10LQ8TDR4 215 aa3.69□□□□□ -1.82
SMCHD1-208ENST00000583344 DCAKDQ8WVC6 231 aa3.69□□□□□ -1.82
SMCHD1-208ENST00000583344 ZNF689Q96CS4 500 aaPredicted RBP3.69□□□□□ -1.82
SMCHD1-208ENST00000583344 DTNBP1Q96EV8 351 aa3.69□□□□□ -1.82
SMCHD1-208ENST00000583344 CMTM3Q96MX0 182 aa3.69□□□□□ -1.82
SMCHD1-208ENST00000583344 GBP5Q96PP8 586 aa3.69□□□□□ -1.82
SMCHD1-208ENST00000583344 PAIP2Q9BPZ3 127 aaKnown RBP3.69□□□□□ -1.82
SMCHD1-208ENST00000583344 SLCO1B3Q9NPD5 702 aa3.69□□□□□ -1.82
SMCHD1-208ENST00000583344 DMAP1Q9NPF5 467 aaPredicted RBP3.69□□□□□ -1.82
SMCHD1-208ENST00000583344 ACP6Q9NPH0 428 aa3.69□□□□□ -1.82
SMCHD1-208ENST00000583344 NMRK1Q9NWW6 199 aa3.69□□□□□ -1.82
SMCHD1-208ENST00000583344 MPP6Q9NZW5 540 aa3.69□□□□□ -1.82
SMCHD1-208ENST00000583344 PAK5Q9P286 719 aa3.69□□□□□ -1.82
SMCHD1-208ENST00000583344 DNPEPQ9ULA0 475 aa3.69□□□□□ -1.82
SMCHD1-208ENST00000583344 PLA2G4CQ9UP65 541 aa3.69□□□□□ -1.82
SMCHD1-208ENST00000583344 ZNF148Q9UQR1 794 aa3.69□□□□□ -1.82
SMCHD1-208ENST00000583344 AAR2Q9Y312 384 aaKnown RBP3.69□□□□□ -1.82
SMCHD1-208ENST00000583344 ZFP37Q9Y6Q3 630 aaPredicted RBP3.69□□□□□ -1.82
SMCHD1-208ENST00000583344 RNF215Q9Y6U7 377 aa3.69□□□□□ -1.82
SMCHD1-208ENST00000583344 RBBP6Q7Z6E9 1792 aaKnown RBP3.68□□□□□ -1.82
SMCHD1-208ENST00000583344 SIPA1L1O43166 1804 aa3.68□□□□□ -1.82
SMCHD1-208ENST00000583344 LY75O60449 1722 aa3.68□□□□□ -1.82
SMCHD1-208ENST00000583344 hCG_1818297A0A087WSY0 165 aa3.68□□□□□ -1.82
SMCHD1-208ENST00000583344 IQANK1A0A1B0GTG1 560 aa3.68□□□□□ -1.82
SMCHD1-208ENST00000583344 FAM237BA0A1B0GVD1 139 aa3.68□□□□□ -1.82
SMCHD1-208ENST00000583344 GSTTP1A0A1W2PQM5 241 aa3.68□□□□□ -1.82
SMCHD1-208ENST00000583344 USP17L23D6RBM5 183 aa3.68□□□□□ -1.82
SMCHD1-208ENST00000583344 SLC16A4O15374 487 aa3.68□□□□□ -1.82
SMCHD1-208ENST00000583344 BIRC5O15392 142 aa3.68□□□□□ -1.82
SMCHD1-208ENST00000583344 ADAM20O43506 726 aa3.68□□□□□ -1.82
SMCHD1-208ENST00000583344 ATP9AO75110 1047 aa3.68□□□□□ -1.82
SMCHD1-208ENST00000583344 PENKP01210 267 aaPredicted RBP3.68□□□□□ -1.82
SMCHD1-208ENST00000583344 PIGRP01833 764 aa3.68□□□□□ -1.82
SMCHD1-208ENST00000583344 C1QAP02745 245 aa3.68□□□□□ -1.82
SMCHD1-208ENST00000583344 MT-ND3P03897 115 aa3.68□□□□□ -1.82
SMCHD1-208ENST00000583344 CALB1P05937 261 aa3.68□□□□□ -1.82
SMCHD1-208ENST00000583344 LYNP07948 512 aa3.68□□□□□ -1.82
SMCHD1-208ENST00000583344 QDPRP09417 244 aa3.68□□□□□ -1.82
SMCHD1-208ENST00000583344 CSF2RAP15509 400 aa3.68□□□□□ -1.82
SMCHD1-208ENST00000583344 CDC25CP30307 473 aa3.68□□□□□ -1.82
SMCHD1-208ENST00000583344 YWHABP31946 246 aaKnown RBP3.68□□□□□ -1.82
SMCHD1-208ENST00000583344 ICAM3P32942 547 aa3.68□□□□□ -1.82
SMCHD1-208ENST00000583344 PBX3P40426 434 aa3.68□□□□□ -1.82
SMCHD1-208ENST00000583344 APOBEC1P41238 236 aaKnown RBP3.68□□□□□ -1.82
SMCHD1-208ENST00000583344 GARSP41250 739 aaKnown RBP3.68□□□□□ -1.82
SMCHD1-208ENST00000583344 CDKN2BP42772 138 aa3.68□□□□□ -1.82
SMCHD1-208ENST00000583344 PSMC4P43686 418 aa3.68□□□□□ -1.82
SMCHD1-208ENST00000583344 NSFP46459 744 aaKnown RBP3.68□□□□□ -1.82
SMCHD1-208ENST00000583344 CAPZA2P47755 286 aa3.68□□□□□ -1.82
SMCHD1-208ENST00000583344 AP3M2P53677 418 aa3.68□□□□□ -1.82
SMCHD1-208ENST00000583344 PEX3P56589 373 aa3.68□□□□□ -1.82
SMCHD1-208ENST00000583344 DSCR10P59022 87 aa3.68□□□□□ -1.82
SMCHD1-208ENST00000583344 SNAP25P60880 206 aa3.68□□□□□ -1.82
SMCHD1-208ENST00000583344 PRAMEP78395 509 aa3.68□□□□□ -1.82
SMCHD1-208ENST00000583344 RBP5P82980 135 aa3.68□□□□□ -1.82
SMCHD1-208ENST00000583344 CNTN2Q02246 1040 aa3.68□□□□□ -1.82
SMCHD1-208ENST00000583344 TMEM115Q12893 351 aaPredicted RBP3.68□□□□□ -1.82
SMCHD1-208ENST00000583344 PDIA2Q13087 525 aaKnown RBP3.68□□□□□ -1.82
SMCHD1-208ENST00000583344 ITGA9Q13797 1035 aa3.68□□□□□ -1.82
SMCHD1-208ENST00000583344 DPYSL3Q14195 570 aa3.68□□□□□ -1.82
SMCHD1-208ENST00000583344 NTRK2Q16620 822 aa3.68□□□□□ -1.82
SMCHD1-208ENST00000583344 TRMT5Q32P41 509 aaKnown RBP3.68□□□□□ -1.82
SMCHD1-208ENST00000583344 USP41Q3LFD5 358 aa3.68□□□□□ -1.82
SMCHD1-208ENST00000583344 DNAL1Q4LDG9 190 aa3.68□□□□□ -1.82
SMCHD1-208ENST00000583344 TFDP3Q5H9I0 405 aa3.68□□□□□ -1.82
SMCHD1-208ENST00000583344 C6orf141Q5SZD1 244 aa3.68□□□□□ -1.82
SMCHD1-208ENST00000583344 LGSNQ5TDP6 509 aa3.68□□□□□ -1.82
SMCHD1-208ENST00000583344 SLC39A4Q6P5W5 647 aa3.68□□□□□ -1.82
SMCHD1-208ENST00000583344 RFWD3Q6PCD5 774 aa3.68□□□□□ -1.82
SMCHD1-208ENST00000583344 MFSD7Q6UXD7 560 aa3.68□□□□□ -1.82
SMCHD1-208ENST00000583344 C4orf22Q6V702 233 aa3.68□□□□□ -1.82
SMCHD1-208ENST00000583344 TIFABQ6ZNK6 161 aa3.68□□□□□ -1.82
SMCHD1-208ENST00000583344 LRRC74BQ6ZQY2 392 aa3.68□□□□□ -1.82
SMCHD1-208ENST00000583344 SEPT14Q6ZU15 432 aa3.68□□□□□ -1.82
SMCHD1-208ENST00000583344 RAPH1Q70E73 1250 aa3.68□□□□□ -1.82
SMCHD1-208ENST00000583344 DPPA4Q7L190 304 aa3.68□□□□□ -1.82
SMCHD1-208ENST00000583344 GSTA5Q7RTV2 222 aa3.68□□□□□ -1.82
SMCHD1-208ENST00000583344 LRRC6Q86X45 466 aa3.68□□□□□ -1.82
SMCHD1-208ENST00000583344 ZBED8Q8IZ13 594 aa3.68□□□□□ -1.82
SMCHD1-208ENST00000583344 C4orf33Q8N1A6 199 aa3.68□□□□□ -1.82
SMCHD1-208ENST00000583344 LYG1Q8N1E2 194 aa3.68□□□□□ -1.82
SMCHD1-208ENST00000583344 NUP93Q8N1F7 819 aa3.68□□□□□ -1.82
SMCHD1-208ENST00000583344 CARNMT1Q8N4J0 409 aa3.68□□□□□ -1.82
SMCHD1-208ENST00000583344 DRAXINQ8NBI3 349 aaPredicted RBP3.68□□□□□ -1.82
SMCHD1-208ENST00000583344 CCDC110Q8TBZ0 833 aa3.68□□□□□ -1.82
SMCHD1-208ENST00000583344 PYROXD1Q8WU10 500 aa3.68□□□□□ -1.82
SMCHD1-208ENST00000583344 ZNF606Q8WXB4 792 aa3.68□□□□□ -1.82
SMCHD1-208ENST00000583344 IRGQQ8WZA9 623 aa3.68□□□□□ -1.82
SMCHD1-208ENST00000583344 VPS33AQ96AX1 596 aa3.68□□□□□ -1.82
SMCHD1-208ENST00000583344 PERPQ96FX8 193 aa3.68□□□□□ -1.82
SMCHD1-208ENST00000583344 CYTH2Q99418 400 aa3.68□□□□□ -1.82
SMCHD1-208ENST00000583344 SIKE1Q9BRV8 207 aa3.68□□□□□ -1.82
SMCHD1-208ENST00000583344 PCGF1Q9BSM1 259 aa3.68□□□□□ -1.82
SMCHD1-208ENST00000583344 CCDC106Q9BWC9 280 aa3.68□□□□□ -1.82
SMCHD1-208ENST00000583344 TSSK1BQ9BXA7 367 aa3.68□□□□□ -1.82
SMCHD1-208ENST00000583344 TEX12Q9BXU0 123 aa3.68□□□□□ -1.82
SMCHD1-208ENST00000583344 MIS12Q9H081 205 aa3.68□□□□□ -1.82
SMCHD1-208ENST00000583344 DHX33Q9H6R0 707 aaKnown RBP3.68□□□□□ -1.82
SMCHD1-208ENST00000583344 VPS37BQ9H9H4 285 aa3.68□□□□□ -1.82
SMCHD1-208ENST00000583344 SLC6A13Q9NSD5 602 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms