RNA–Protein interactions for RNA: ENST00000580237.5

NDEL1-208, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 4

Gene NDEL1, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-208ENST00000580237 HIVEP3Q5T1R4 2406 aa10.2□□□□□ -0.78
NDEL1-208ENST00000580237 C10orf62Q5T681 223 aaPredicted RBP10.2□□□□□ -0.78
NDEL1-208ENST00000580237 DEPDC1Q5TB30 811 aa10.2□□□□□ -0.78
NDEL1-208ENST00000580237 RPS27LQ71UM5 84 aaKnown RBP10.2□□□□□ -0.78
NDEL1-208ENST00000580237 UBE3DQ7Z6J8 389 aa10.2□□□□□ -0.78
NDEL1-208ENST00000580237 SLC22A9Q8IVM8 553 aa10.2□□□□□ -0.78
NDEL1-208ENST00000580237 KIF2BQ8N4N8 673 aa10.2□□□□□ -0.78
NDEL1-208ENST00000580237 AMER2Q8N7J2 671 aa10.2□□□□□ -0.78
NDEL1-208ENST00000580237 TMEM52Q8NDY8 209 aa10.2□□□□□ -0.78
NDEL1-208ENST00000580237 B3GNT7Q8NFL0 401 aa10.2□□□□□ -0.78
NDEL1-208ENST00000580237 OR4F6Q8NGB9 312 aa10.2□□□□□ -0.78
NDEL1-208ENST00000580237 TRPC4APQ8TEL6 797 aa10.2□□□□□ -0.78
NDEL1-208ENST00000580237 ZNF483Q8TF39 744 aaPredicted RBP10.2□□□□□ -0.78
NDEL1-208ENST00000580237 MTFMTQ96DP5 389 aaKnown RBP10.2□□□□□ -0.78
NDEL1-208ENST00000580237 C19orf60Q96EN9 201 aa10.2□□□□□ -0.78
NDEL1-208ENST00000580237 VMP1Q96GC9 406 aa10.2□□□□□ -0.78
NDEL1-208ENST00000580237 C5orf34Q96MH7 638 aa10.2□□□□□ -0.78
NDEL1-208ENST00000580237 SERPINI1Q99574 410 aa10.2□□□□□ -0.78
NDEL1-208ENST00000580237 NTMT1Q9BV86 223 aa10.2□□□□□ -0.78
NDEL1-208ENST00000580237 DEFB126Q9BYW3 111 aa10.2□□□□□ -0.78
NDEL1-208ENST00000580237 IQCGQ9H095 443 aaKnown RBP10.2□□□□□ -0.78
NDEL1-208ENST00000580237 ANKZF1Q9H8Y5 726 aa10.2□□□□□ -0.78
NDEL1-208ENST00000580237 WDR41Q9HAD4 459 aa10.2□□□□□ -0.78
NDEL1-208ENST00000580237 LYARQ9NX58 379 aaKnown RBP10.2□□□□□ -0.78
NDEL1-208ENST00000580237 MS4A12Q9NXJ0 267 aa10.2□□□□□ -0.78
NDEL1-208ENST00000580237 ANKRD10Q9NXR5 420 aa10.2□□□□□ -0.78
NDEL1-208ENST00000580237 DCDC2Q9UHG0 476 aa10.2□□□□□ -0.78
NDEL1-208ENST00000580237 SNX6Q9UNH7 406 aa10.2□□□□□ -0.78
NDEL1-208ENST00000580237 BSNQ9UPA5 3926 aa10.2□□□□□ -0.78
NDEL1-208ENST00000580237 STK38LQ9Y2H1 464 aa10.2□□□□□ -0.78
NDEL1-208ENST00000580237 TSC22D4Q9Y3Q8 395 aa10.2□□□□□ -0.78
NDEL1-208ENST00000580237 CLCA3PQ9Y6N3 262 aa10.2□□□□□ -0.78
NDEL1-208ENST00000580237 TCP11X1B4DZS4 312 aa10.19□□□□□ -0.78
NDEL1-208ENST00000580237 CYR61O00622 381 aa10.19□□□□□ -0.78
NDEL1-208ENST00000580237 DYRK3O43781 588 aa10.19□□□□□ -0.78
NDEL1-208ENST00000580237 ZNF500O60304 480 aaPredicted RBP10.19□□□□□ -0.78
NDEL1-208ENST00000580237 PRAMEF2O60811 474 aa10.19□□□□□ -0.78
NDEL1-208ENST00000580237 LDB3O75112 727 aa10.19□□□□□ -0.78
NDEL1-208ENST00000580237 CDH16O75309 829 aa10.19□□□□□ -0.78
NDEL1-208ENST00000580237 AGFG2O95081 481 aa10.19□□□□□ -0.78
NDEL1-208ENST00000580237 NR2F6P10588 404 aa10.19□□□□□ -0.78
NDEL1-208ENST00000580237 MYL2P10916 166 aa10.19□□□□□ -0.78
NDEL1-208ENST00000580237 PPP2R1BP30154 601 aa10.19□□□□□ -0.78
NDEL1-208ENST00000580237 HMOX2P30519 316 aa10.19□□□□□ -0.78
NDEL1-208ENST00000580237 HSD17B3P37058 310 aa10.19□□□□□ -0.78
NDEL1-208ENST00000580237 VSNL1P62760 191 aa10.19□□□□□ -0.78
NDEL1-208ENST00000580237 PLIN5Q00G26 463 aa10.19□□□□□ -0.78
NDEL1-208ENST00000580237 ID2Q02363 134 aa10.19□□□□□ -0.78
NDEL1-208ENST00000580237 CLCQ05315 142 aa10.19□□□□□ -0.78
NDEL1-208ENST00000580237 MRPL49Q13405 166 aaKnown RBP10.19□□□□□ -0.78
NDEL1-208ENST00000580237 CUL3Q13618 768 aa10.19□□□□□ -0.78
NDEL1-208ENST00000580237 ELAVL1Q15717 326 aaKnown RBP10.19□□□□□ -0.78
NDEL1-208ENST00000580237 GGTA1PQ4G0N0 100 aa10.19□□□□□ -0.78
NDEL1-208ENST00000580237 GPRIN3Q6ZVF9 776 aa10.19□□□□□ -0.78
NDEL1-208ENST00000580237 GPR180Q86V85 440 aa10.19□□□□□ -0.78
NDEL1-208ENST00000580237 RPS19BP1Q86WX3 136 aaKnown RBP10.19□□□□□ -0.78
NDEL1-208ENST00000580237 LGI4Q8N135 537 aa10.19□□□□□ -0.78
NDEL1-208ENST00000580237 TMEM132CQ8N3T6 1108 aa10.19□□□□□ -0.78
NDEL1-208ENST00000580237 ZCCHC7Q8N3Z6 543 aaKnown RBP10.19□□□□□ -0.78
NDEL1-208ENST00000580237 HORMAD2Q8N7B1 307 aa10.19□□□□□ -0.78
NDEL1-208ENST00000580237 BCORP1Q8N888 145 aa10.19□□□□□ -0.78
NDEL1-208ENST00000580237 OR14A16Q8NHC5 309 aa10.19□□□□□ -0.78
NDEL1-208ENST00000580237 WDR20Q8TBZ3 569 aa10.19□□□□□ -0.78
NDEL1-208ENST00000580237 GRHL3Q8TE85 626 aa10.19□□□□□ -0.78
NDEL1-208ENST00000580237 THAP3Q8WTV1 239 aaPredicted RBP10.19□□□□□ -0.78
NDEL1-208ENST00000580237 SELENOMQ8WWX9 145 aa10.19□□□□□ -0.78
NDEL1-208ENST00000580237 HAS2Q92819 552 aa10.19□□□□□ -0.78
NDEL1-208ENST00000580237 DAZLQ92904 295 aaKnown RBP10.19□□□□□ -0.78
NDEL1-208ENST00000580237 NCLNQ969V3 563 aa10.19□□□□□ -0.78
NDEL1-208ENST00000580237 CCDC126Q96EE4 140 aa10.19□□□□□ -0.78
NDEL1-208ENST00000580237 DGAT2Q96PD7 388 aa10.19□□□□□ -0.78
NDEL1-208ENST00000580237 TMEM237Q96Q45 408 aa10.19□□□□□ -0.78
NDEL1-208ENST00000580237 ZBTB26Q9HCK0 441 aa10.19□□□□□ -0.78
NDEL1-208ENST00000580237 OLAHQ9NV23 265 aa10.19□□□□□ -0.78
NDEL1-208ENST00000580237 AHSPQ9NZD4 102 aa10.19□□□□□ -0.78
NDEL1-208ENST00000580237 COPS7AQ9UBW8 275 aa10.19□□□□□ -0.78
NDEL1-208ENST00000580237 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.19□□□□□ -0.788e-8■■□□□ 12.9
NDEL1-208ENST00000580237 TRPS1Q9UHF7 1281 aa10.19□□□□□ -0.78
NDEL1-208ENST00000580237 SLC12A4Q9UP95 1085 aa10.19□□□□□ -0.78
NDEL1-208ENST00000580237 V9GYY5 206 aaPredicted RBP10.19□□□□□ -0.78
NDEL1-208ENST00000580237 DIDO1Q9BTC0 2240 aaKnown RBP10.18□□□□□ -0.78
NDEL1-208ENST00000580237 MYOCOSA0A1B0GUC4 107 aa10.18□□□□□ -0.78
NDEL1-208ENST00000580237 A0A1W2PPM1 405 aa10.18□□□□□ -0.78
NDEL1-208ENST00000580237 TLDC2A0PJX2 215 aa10.18□□□□□ -0.78
NDEL1-208ENST00000580237 ANKUB1A6NFN9 424 aa10.18□□□□□ -0.78
NDEL1-208ENST00000580237 ESPNB1AK53 854 aa10.18□□□□□ -0.78
NDEL1-208ENST00000580237 TGFBR3LH3BV60 316 aa10.18□□□□□ -0.78
NDEL1-208ENST00000580237 FOXE1O00358 373 aaPredicted RBP10.18□□□□□ -0.78
NDEL1-208ENST00000580237 COPEO14579 308 aa10.18□□□□□ -0.78
NDEL1-208ENST00000580237 OR10H2O60403 315 aa10.18□□□□□ -0.78
NDEL1-208ENST00000580237 DLX3O60479 287 aa10.18□□□□□ -0.78
NDEL1-208ENST00000580237 CTNSO60931 367 aa10.18□□□□□ -0.78
NDEL1-208ENST00000580237 CRCPO75575 148 aa10.18□□□□□ -0.78
NDEL1-208ENST00000580237 OR4F21O95013 312 aa10.18□□□□□ -0.78
NDEL1-208ENST00000580237 SEMA3DO95025 777 aa10.18□□□□□ -0.78
NDEL1-208ENST00000580237 RASAL1O95294 804 aa10.18□□□□□ -0.78
NDEL1-208ENST00000580237 ETHE1O95571 254 aa10.18□□□□□ -0.78
NDEL1-208ENST00000580237 MLYCDO95822 493 aa10.18□□□□□ -0.78
NDEL1-208ENST00000580237 KRT6AP02538 564 aa10.18□□□□□ -0.78
NDEL1-208ENST00000580237 KRT6BP04259 564 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms