RNA–Protein interactions for RNA: ENST00000578519.5

SKA2-204, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3

Gene SKA2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-204ENST00000578519 ADAMDEC1O15204 470 aa10.57□□□□□ -0.72
SKA2-204ENST00000578519 YY2O15391 372 aa10.57□□□□□ -0.72
SKA2-204ENST00000578519 UGT2B11O75310 529 aa10.57□□□□□ -0.72
SKA2-204ENST00000578519 TNFRSF21O75509 655 aa10.57□□□□□ -0.72
SKA2-204ENST00000578519 H6PDO95479 791 aa10.57□□□□□ -0.72
SKA2-204ENST00000578519 CLPTM1O96005 669 aa10.57□□□□□ -0.72
SKA2-204ENST00000578519 ARAFP10398 606 aa10.57□□□□□ -0.72
SKA2-204ENST00000578519 UGT2B7P16662 529 aa10.57□□□□□ -0.72
SKA2-204ENST00000578519 JUNDP17535 347 aa10.57□□□□□ -0.72
SKA2-204ENST00000578519 POLR2CP19387 275 aaPredicted RBP10.57□□□□□ -0.72
SKA2-204ENST00000578519 FPR1P21462 350 aa10.57□□□□□ -0.72
SKA2-204ENST00000578519 CD38P28907 300 aa10.57□□□□□ -0.72
SKA2-204ENST00000578519 RPL5P46777 297 aaKnown RBP10.57□□□□□ -0.72
SKA2-204ENST00000578519 CCT3P49368 545 aaKnown RBP10.57□□□□□ -0.72
SKA2-204ENST00000578519 PCBP4P57723 403 aaKnown RBP10.57□□□□□ -0.72
SKA2-204ENST00000578519 TUBA4AP68366 448 aa10.57□□□□□ -0.72
SKA2-204ENST00000578519 PRR5P85299 388 aa10.57□□□□□ -0.72
SKA2-204ENST00000578519 IL18R1Q13478 541 aa10.57□□□□□ -0.72
SKA2-204ENST00000578519 SIM2Q14190 667 aaPredicted RBP10.57□□□□□ -0.72
SKA2-204ENST00000578519 CYBRD1Q53TN4 286 aa10.57□□□□□ -0.72
SKA2-204ENST00000578519 ZC3H12BQ5HYM0 836 aaKnown RBP10.57□□□□□ -0.72
SKA2-204ENST00000578519 CRB2Q5IJ48 1285 aa10.57□□□□□ -0.72
SKA2-204ENST00000578519 OTUD3Q5T2D3 398 aaPredicted RBP10.57□□□□□ -0.72
SKA2-204ENST00000578519 SAXO2Q658L1 398 aa10.57□□□□□ -0.72
SKA2-204ENST00000578519 MRM1Q6IN84 353 aaKnown RBP10.57□□□□□ -0.72
SKA2-204ENST00000578519 REEP3Q6NUK4 255 aa10.57□□□□□ -0.72
SKA2-204ENST00000578519 SHQ1Q6PI26 577 aaKnown RBP10.57□□□□□ -0.72
SKA2-204ENST00000578519 KRT73Q86Y46 540 aa10.57□□□□□ -0.72
SKA2-204ENST00000578519 NRROSQ86YC3 692 aa10.57□□□□□ -0.72
SKA2-204ENST00000578519 ARMC8Q8IUR7 673 aa10.57□□□□□ -0.72
SKA2-204ENST00000578519 PLD3Q8IV08 490 aa10.57□□□□□ -0.72
SKA2-204ENST00000578519 UBALD2Q8IYN6 164 aa10.57□□□□□ -0.72
SKA2-204ENST00000578519 ARL10Q8N8L6 244 aa10.57□□□□□ -0.72
SKA2-204ENST00000578519 OR56A1Q8NGH5 318 aa10.57□□□□□ -0.72
SKA2-204ENST00000578519 PNPT1Q8TCS8 783 aaKnown RBP10.57□□□□□ -0.72
SKA2-204ENST00000578519 CIDECQ96AQ7 238 aaPredicted RBP10.57□□□□□ -0.72
SKA2-204ENST00000578519 EXOSC8Q96B26 276 aaKnown RBP10.57□□□□□ -0.72
SKA2-204ENST00000578519 HSH2DQ96JZ2 352 aa10.57□□□□□ -0.72
SKA2-204ENST00000578519 OR2A14Q96R47 310 aa10.57□□□□□ -0.72
SKA2-204ENST00000578519 SERINC2Q96SA4 455 aa10.57□□□□□ -0.72
SKA2-204ENST00000578519 ZFYVE21Q9BQ24 234 aa10.57□□□□□ -0.72
SKA2-204ENST00000578519 ZNF717Q9BY31 904 aaPredicted RBP10.57□□□□□ -0.72
SKA2-204ENST00000578519 ABCG4Q9H172 646 aa10.57□□□□□ -0.72
SKA2-204ENST00000578519 CHST8Q9H2A9 424 aa10.57□□□□□ -0.72
SKA2-204ENST00000578519 UCK1Q9HA47 277 aa10.57□□□□□ -0.72
SKA2-204ENST00000578519 CACYBPQ9HB71 228 aaKnown RBP10.57□□□□□ -0.72
SKA2-204ENST00000578519 A4GALTQ9NPC4 353 aa10.57□□□□□ -0.72
SKA2-204ENST00000578519 PRDM7Q9NQW5 492 aa10.57□□□□□ -0.72
SKA2-204ENST00000578519 SPHK1Q9NYA1 384 aa10.57□□□□□ -0.72
SKA2-204ENST00000578519 APOBEC3BQ9UH17 382 aaKnown RBP10.57□□□□□ -0.72
SKA2-204ENST00000578519 RAPGEFL1Q9UHV5 662 aa10.57□□□□□ -0.72
SKA2-204ENST00000578519 ENOPH1Q9UHY7 261 aa10.57□□□□□ -0.72
SKA2-204ENST00000578519 UTS2RQ9UKP6 389 aa10.57□□□□□ -0.72
SKA2-204ENST00000578519 MAP4K5Q9Y4K4 846 aa10.57□□□□□ -0.72
SKA2-204ENST00000578519 PCDHGB3Q9Y5G1 929 aa10.57□□□□□ -0.72
SKA2-204ENST00000578519 A0A087WXM4 84 aa10.56□□□□□ -0.72
SKA2-204ENST00000578519 DPPA5A6NC42 116 aa10.56□□□□□ -0.72
SKA2-204ENST00000578519 SHISA7A6NL88 538 aa10.56□□□□□ -0.72
SKA2-204ENST00000578519 BTN3A3O00478 584 aa10.56□□□□□ -0.72
SKA2-204ENST00000578519 SCAMP1O15126 338 aa10.56□□□□□ -0.72
SKA2-204ENST00000578519 B3GALT2O43825 422 aa10.56□□□□□ -0.72
SKA2-204ENST00000578519 TMPRSS11DO60235 418 aa10.56□□□□□ -0.72
SKA2-204ENST00000578519 SERPINB7O75635 380 aa10.56□□□□□ -0.72
SKA2-204ENST00000578519 KLHL18O94889 574 aa10.56□□□□□ -0.72
SKA2-204ENST00000578519 SOX30O94993 753 aa10.56□□□□□ -0.72
SKA2-204ENST00000578519 AGR2O95994 175 aa10.56□□□□□ -0.72
SKA2-204ENST00000578519 ETFAP13804 333 aa10.56□□□□□ -0.72
SKA2-204ENST00000578519 FOSL2P15408 326 aa10.56□□□□□ -0.72
SKA2-204ENST00000578519 EFNA1P20827 205 aaPredicted RBP10.56□□□□□ -0.72
SKA2-204ENST00000578519 PEBP1P30086 187 aaKnown RBP10.56□□□□□ -0.72
SKA2-204ENST00000578519 KHKP50053 298 aa10.56□□□□□ -0.72
SKA2-204ENST00000578519 NR1H2P55055 460 aa10.56□□□□□ -0.72
SKA2-204ENST00000578519 SMIM11AP58511 58 aa10.56□□□□□ -0.72
SKA2-204ENST00000578519 ESRRGP62508 458 aa10.56□□□□□ -0.72
SKA2-204ENST00000578519 RACK1P63244 317 aaKnown RBP10.56□□□□□ -0.72
SKA2-204ENST00000578519 UBE2IP63279 158 aaKnown RBP10.56□□□□□ -0.72
SKA2-204ENST00000578519 BTN3A2P78410 334 aa10.56□□□□□ -0.72
SKA2-204ENST00000578519 EIF2B5Q13144 721 aaKnown RBP10.56□□□□□ -0.72
SKA2-204ENST00000578519 GAB1Q13480 694 aa10.56□□□□□ -0.72
SKA2-204ENST00000578519 GPR18Q14330 331 aa10.56□□□□□ -0.72
SKA2-204ENST00000578519 FZD2Q14332 565 aa10.56□□□□□ -0.72
SKA2-204ENST00000578519 KCTD21Q4G0X4 260 aa10.56□□□□□ -0.72
SKA2-204ENST00000578519 TMEM214Q6NUQ4 689 aaKnown RBP10.56□□□□□ -0.72
SKA2-204ENST00000578519 SPESP1Q6UW49 350 aa10.56□□□□□ -0.72
SKA2-204ENST00000578519 CEACAM20Q6UY09 585 aa10.56□□□□□ -0.72
SKA2-204ENST00000578519 Q6ZS52 159 aa10.56□□□□□ -0.72
SKA2-204ENST00000578519 C6orf120Q7Z4R8 191 aa10.56□□□□□ -0.72
SKA2-204ENST00000578519 UBE3DQ7Z6J8 389 aa10.56□□□□□ -0.72
SKA2-204ENST00000578519 CYP4Z1Q86W10 505 aa10.56□□□□□ -0.72
SKA2-204ENST00000578519 RNF130Q86XS8 419 aa10.56□□□□□ -0.72
SKA2-204ENST00000578519 EPHX4Q8IUS5 362 aa10.56□□□□□ -0.72
SKA2-204ENST00000578519 FBXL6Q8N531 539 aa10.56□□□□□ -0.72
SKA2-204ENST00000578519 SETD9Q8NE22 299 aa10.56□□□□□ -0.72
SKA2-204ENST00000578519 FAM46DQ8NEK8 389 aa10.56□□□□□ -0.72
SKA2-204ENST00000578519 OR10G6Q8NH81 332 aa10.56□□□□□ -0.72
SKA2-204ENST00000578519 CCL4L1Q8NHW4 92 aa10.56□□□□□ -0.72
SKA2-204ENST00000578519 PSMA8Q8TAA3 256 aa10.56□□□□□ -0.72
SKA2-204ENST00000578519 SPPL2AQ8TCT8 520 aa10.56□□□□□ -0.72
SKA2-204ENST00000578519 ZDHHC1Q8WTX9 485 aa10.56□□□□□ -0.72
SKA2-204ENST00000578519 GEMIN6Q8WXD5 167 aaKnown RBP10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms