RNA–Protein interactions for RNA: ENST00000576958.1

PRPF8-215, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 416 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-215ENST00000576958 ASB15Q8WXK1 588 aa11.14□□□□□ -0.63
PRPF8-215ENST00000576958 ANKRD9Q96BM1 317 aaPredicted RBP11.14□□□□□ -0.63
PRPF8-215ENST00000576958 PPWD1Q96BP3 646 aaKnown RBP11.14□□□□□ -0.63
PRPF8-215ENST00000576958 VPS39Q96JC1 886 aa11.14□□□□□ -0.63
PRPF8-215ENST00000576958 FAR2Q96K12 515 aa11.14□□□□□ -0.63
PRPF8-215ENST00000576958 ALOXE3Q9BYJ1 711 aa11.14□□□□□ -0.63
PRPF8-215ENST00000576958 REXO4Q9GZR2 422 aaKnown RBP11.14□□□□□ -0.63
PRPF8-215ENST00000576958 ZDHHC11Q9H8X9 412 aa11.14□□□□□ -0.63
PRPF8-215ENST00000576958 HPF1Q9NWY4 346 aa11.14□□□□□ -0.63
PRPF8-215ENST00000576958 SPRR3Q9UBC9 169 aa11.14□□□□□ -0.63
PRPF8-215ENST00000576958 MYOTQ9UBF9 498 aa11.14□□□□□ -0.63
PRPF8-215ENST00000576958 Q9UFV3 132 aa11.14□□□□□ -0.63
PRPF8-215ENST00000576958 DAPP1Q9UN19 280 aa11.14□□□□□ -0.63
PRPF8-215ENST00000576958 C17orf105B2RV13 164 aa11.13□□□□□ -0.63
PRPF8-215ENST00000576958 B3GALT2O43825 422 aa11.13□□□□□ -0.63
PRPF8-215ENST00000576958 FGF17O60258 216 aa11.13□□□□□ -0.63
PRPF8-215ENST00000576958 ZFAND5O76080 213 aa11.13□□□□□ -0.63
PRPF8-215ENST00000576958 SEC31AO94979 1220 aaKnown RBP11.13□□□□□ -0.63
PRPF8-215ENST00000576958 TUBB4AP04350 444 aa11.13□□□□□ -0.63
PRPF8-215ENST00000576958 GLI4P10075 376 aa11.13□□□□□ -0.63
PRPF8-215ENST00000576958 SSTR1P30872 391 aa11.13□□□□□ -0.63
PRPF8-215ENST00000576958 RPL21P46778 160 aaKnown RBP11.13□□□□□ -0.63
PRPF8-215ENST00000576958 HSD17B7P56937 341 aa11.13□□□□□ -0.63
PRPF8-215ENST00000576958 STXBP1P61764 594 aaKnown RBP11.13□□□□□ -0.63
PRPF8-215ENST00000576958 MGAT5Q09328 741 aa11.13□□□□□ -0.63
PRPF8-215ENST00000576958 DLG1Q12959 904 aa11.13□□□□□ -0.63
PRPF8-215ENST00000576958 PRAMEF20Q5VT98 475 aa11.13□□□□□ -0.63
PRPF8-215ENST00000576958 FRA10AC1Q70Z53 315 aa11.13□□□□□ -0.63
PRPF8-215ENST00000576958 TMEM200AQ86VY9 491 aa11.13□□□□□ -0.63
PRPF8-215ENST00000576958 GPSM1Q86YR5 675 aa11.13□□□□□ -0.63
PRPF8-215ENST00000576958 C9orf40Q8IXQ3 194 aa11.13□□□□□ -0.63
PRPF8-215ENST00000576958 PDIK1LQ8N165 341 aa11.13□□□□□ -0.63
PRPF8-215ENST00000576958 POGLUT1Q8NBL1 392 aa11.13□□□□□ -0.63
PRPF8-215ENST00000576958 ARMC2Q8NEN0 867 aa11.13□□□□□ -0.63
PRPF8-215ENST00000576958 OR2L5Q8NG80 312 aa11.13□□□□□ -0.63
PRPF8-215ENST00000576958 OR5M3Q8NGP4 307 aa11.13□□□□□ -0.63
PRPF8-215ENST00000576958 ZNF721Q8TF20 911 aa11.13□□□□□ -0.63
PRPF8-215ENST00000576958 RND1Q92730 232 aa11.13□□□□□ -0.63
PRPF8-215ENST00000576958 TP63Q9H3D4 680 aaPredicted RBP11.13□□□□□ -0.63
PRPF8-215ENST00000576958 PROK2Q9HC23 129 aa11.13□□□□□ -0.63
PRPF8-215ENST00000576958 ADAP2Q9NPF8 381 aa11.13□□□□□ -0.63
PRPF8-215ENST00000576958 TIMMDC1Q9NPL8 285 aa11.13□□□□□ -0.63
PRPF8-215ENST00000576958 MOCS1Q9NZB8 636 aa11.13□□□□□ -0.63
PRPF8-215ENST00000576958 WWOXQ9NZC7 414 aa11.13□□□□□ -0.63
PRPF8-215ENST00000576958 COQ3Q9NZJ6 369 aa11.13□□□□□ -0.63
PRPF8-215ENST00000576958 YARS2Q9Y2Z4 477 aaKnown RBP11.13□□□□□ -0.63
PRPF8-215ENST00000576958 SNX24Q9Y343 169 aa11.13□□□□□ -0.63
PRPF8-215ENST00000576958 GOLGA6L10A0A0M3HER8 536 aa11.12□□□□□ -0.63
PRPF8-215ENST00000576958 URADA6NGE7 173 aa11.12□□□□□ -0.63
PRPF8-215ENST00000576958 LRRC14BA6NHZ5 514 aa11.12□□□□□ -0.63
PRPF8-215ENST00000576958 CLDN4O14493 209 aa11.12□□□□□ -0.63
PRPF8-215ENST00000576958 CLGNO14967 610 aa11.12□□□□□ -0.63
PRPF8-215ENST00000576958 NADKO95544 446 aaPredicted RBP11.12□□□□□ -0.63
PRPF8-215ENST00000576958 C1QAP02745 245 aa11.12□□□□□ -0.63
PRPF8-215ENST00000576958 CD1DP15813 335 aa11.12□□□□□ -0.63
PRPF8-215ENST00000576958 GNAZP19086 355 aa11.12□□□□□ -0.63
PRPF8-215ENST00000576958 CHRNB4P30926 498 aa11.12□□□□□ -0.63
PRPF8-215ENST00000576958 ART1P52961 327 aa11.12□□□□□ -0.63
PRPF8-215ENST00000576958 RNF4P78317 190 aa11.12□□□□□ -0.63
PRPF8-215ENST00000576958 CDKL1Q00532 357 aa11.12□□□□□ -0.63
PRPF8-215ENST00000576958 DR1Q01658 176 aa11.12□□□□□ -0.63
PRPF8-215ENST00000576958 ASPHQ12797 758 aa11.12□□□□□ -0.63
PRPF8-215ENST00000576958 MORF4L2Q15014 288 aa11.12□□□□□ -0.63
PRPF8-215ENST00000576958 EFTUD2Q15029 972 aaKnown RBP eCLIP11.12□□□□□ -0.631e-5■□□□□ 8.3
PRPF8-215ENST00000576958 TERF2Q15554 542 aa11.12□□□□□ -0.63
PRPF8-215ENST00000576958 ELAVL1Q15717 326 aaKnown RBP11.12□□□□□ -0.63
PRPF8-215ENST00000576958 C18orf63Q68DL7 685 aa11.12□□□□□ -0.63
PRPF8-215ENST00000576958 ARHGAP11AQ6P4F7 1023 aa11.12□□□□□ -0.63
PRPF8-215ENST00000576958 LYPD8Q6UX82 237 aa11.12□□□□□ -0.63
PRPF8-215ENST00000576958 TMEM64Q6YI46 380 aa11.12□□□□□ -0.63
PRPF8-215ENST00000576958 HSDL2Q6YN16 418 aa11.12□□□□□ -0.63
PRPF8-215ENST00000576958 SPNS3Q6ZMD2 512 aa11.12□□□□□ -0.63
PRPF8-215ENST00000576958 SEM1Q6ZVN7 128 aa11.12□□□□□ -0.63
PRPF8-215ENST00000576958 CREG2Q8IUH2 290 aa11.12□□□□□ -0.63
PRPF8-215ENST00000576958 NKAPQ8N5F7 415 aaKnown RBP11.12□□□□□ -0.63
PRPF8-215ENST00000576958 OR10Q1Q8NGQ4 319 aa11.12□□□□□ -0.63
PRPF8-215ENST00000576958 SMC6Q96SB8 1091 aa11.12□□□□□ -0.63
PRPF8-215ENST00000576958 NAP1L3Q99457 506 aaPredicted RBP11.12□□□□□ -0.63
PRPF8-215ENST00000576958 TTYH2Q9BSA4 534 aa11.12□□□□□ -0.63
PRPF8-215ENST00000576958 NAT9Q9BTE0 207 aa11.12□□□□□ -0.63
PRPF8-215ENST00000576958 DNAJC11Q9NVH1 559 aa11.12□□□□□ -0.63
PRPF8-215ENST00000576958 CORO1CQ9ULV4 474 aaPredicted RBP11.12□□□□□ -0.63
PRPF8-215ENST00000576958 FREM3P0C091 2139 aa11.12□□□□□ -0.63
PRPF8-215ENST00000576958 LRRC3CA6NJW4 275 aa11.11□□□□□ -0.63
PRPF8-215ENST00000576958 CCNT2O60583 730 aaKnown RBP11.11□□□□□ -0.63
PRPF8-215ENST00000576958 CTNSO60931 367 aa11.11□□□□□ -0.63
PRPF8-215ENST00000576958 CLEC3AO75596 197 aa11.11□□□□□ -0.63
PRPF8-215ENST00000576958 TGFB1P01137 390 aa11.11□□□□□ -0.63
PRPF8-215ENST00000576958 CCDC166P0CW27 439 aa11.11□□□□□ -0.63
PRPF8-215ENST00000576958 ATP5A1P25705 553 aaKnown RBP11.11□□□□□ -0.63
PRPF8-215ENST00000576958 DNAJA1P31689 397 aaKnown RBP11.11□□□□□ -0.63
PRPF8-215ENST00000576958 MSH2P43246 934 aa11.11□□□□□ -0.63
PRPF8-215ENST00000576958 TRPC1P48995 793 aa11.11□□□□□ -0.63
PRPF8-215ENST00000576958 IST1P53990 364 aa11.11□□□□□ -0.63
PRPF8-215ENST00000576958 MTTPP55157 894 aa11.11□□□□□ -0.63
PRPF8-215ENST00000576958 SKP1P63208 163 aa11.11□□□□□ -0.63
PRPF8-215ENST00000576958 CHIT1Q13231 466 aa11.11□□□□□ -0.63
PRPF8-215ENST00000576958 UBAP2Q5T6F2 1119 aaKnown RBP11.11□□□□□ -0.63
PRPF8-215ENST00000576958 BICRALQ6AI39 1079 aa11.11□□□□□ -0.63
PRPF8-215ENST00000576958 FAM47EQ6ZV65 393 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms