RNA–Protein interactions for RNA: ENST00000574964.1

NPLOC4-218, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-218ENST00000574964 CCL27Q9Y4X3 112 aa13.68□□□□□ -0.22
NPLOC4-218ENST00000574964 MAP1BP46821 2468 aaKnown RBP13.68□□□□□ -0.22
NPLOC4-218ENST00000574964 PTPRQQ9UMZ3 2332 aa13.67□□□□□ -0.22
NPLOC4-218ENST00000574964 MED13Q9UHV7 2174 aa13.67□□□□□ -0.22
NPLOC4-218ENST00000574964 A0A087WV48 116 aa13.67□□□□□ -0.22
NPLOC4-218ENST00000574964 BLACEA4D250 179 aa13.67□□□□□ -0.22
NPLOC4-218ENST00000574964 PEX12O00623 359 aa13.67□□□□□ -0.22
NPLOC4-218ENST00000574964 LSM1O15116 133 aaKnown RBP13.67□□□□□ -0.22
NPLOC4-218ENST00000574964 NKX2-8O15522 239 aa13.67□□□□□ -0.22
NPLOC4-218ENST00000574964 EFSO43281 561 aa13.67□□□□□ -0.22
NPLOC4-218ENST00000574964 PRMT3O60678 531 aa13.67□□□□□ -0.22
NPLOC4-218ENST00000574964 VPS4BO75351 444 aa13.67□□□□□ -0.22
NPLOC4-218ENST00000574964 VIMP08670 466 aaKnown RBP13.67□□□□□ -0.22
NPLOC4-218ENST00000574964 NR2F6P10588 404 aa13.67□□□□□ -0.22
NPLOC4-218ENST00000574964 PRKAR1AP10644 381 aa13.67□□□□□ -0.22
NPLOC4-218ENST00000574964 MAPK1P28482 360 aa13.67□□□□□ -0.22
NPLOC4-218ENST00000574964 TMPRSS3P57727 454 aa13.67□□□□□ -0.22
NPLOC4-218ENST00000574964 TRA2BP62995 288 aaKnown RBP13.67□□□□□ -0.22
NPLOC4-218ENST00000574964 TNFRSF17Q02223 184 aa13.67□□□□□ -0.22
NPLOC4-218ENST00000574964 SLC13A2Q13183 592 aa13.67□□□□□ -0.22
NPLOC4-218ENST00000574964 XKR7Q5GH72 579 aa13.67□□□□□ -0.22
NPLOC4-218ENST00000574964 MRM1Q6IN84 353 aaKnown RBP13.67□□□□□ -0.22
NPLOC4-218ENST00000574964 NOXRED1Q6NXP6 359 aa13.67□□□□□ -0.22
NPLOC4-218ENST00000574964 ZNF595Q8IYB9 648 aa13.67□□□□□ -0.22
NPLOC4-218ENST00000574964 SHISA5Q8N114 240 aa13.67□□□□□ -0.22
NPLOC4-218ENST00000574964 FNDC5Q8NAU1 212 aa13.67□□□□□ -0.22
NPLOC4-218ENST00000574964 C3orf30Q96M34 536 aa13.67□□□□□ -0.22
NPLOC4-218ENST00000574964 CSF3RQ99062 836 aa13.67□□□□□ -0.22
NPLOC4-218ENST00000574964 FAIM2Q9BWQ8 316 aa13.67□□□□□ -0.22
NPLOC4-218ENST00000574964 RPF2Q9H7B2 306 aaKnown RBP13.67□□□□□ -0.22
NPLOC4-218ENST00000574964 SIRT5Q9NXA8 310 aa13.67□□□□□ -0.22
NPLOC4-218ENST00000574964 C19orf25Q9UFG5 118 aaPredicted RBP13.67□□□□□ -0.22
NPLOC4-218ENST00000574964 GIMAP2Q9UG22 337 aa13.67□□□□□ -0.22
NPLOC4-218ENST00000574964 TMED5Q9Y3A6 229 aa13.67□□□□□ -0.22
NPLOC4-218ENST00000574964 ATG4BQ9Y4P1 393 aa13.67□□□□□ -0.22
NPLOC4-218ENST00000574964 MMACHCQ9Y4U1 282 aa13.67□□□□□ -0.22
NPLOC4-218ENST00000574964 ASB4Q9Y574 426 aa13.67□□□□□ -0.22
NPLOC4-218ENST00000574964 NPIPB8E9PQR5 432 aa13.66□□□□□ -0.22
NPLOC4-218ENST00000574964 PROM1O43490 865 aa13.66□□□□□ -0.22
NPLOC4-218ENST00000574964 ALOX12BO75342 701 aa13.66□□□□□ -0.22
NPLOC4-218ENST00000574964 JUNP05412 331 aaKnown RBP13.66□□□□□ -0.22
NPLOC4-218ENST00000574964 UMODP07911 640 aa13.66□□□□□ -0.22
NPLOC4-218ENST00000574964 C8orf89P0DMQ9 161 aa13.66□□□□□ -0.22
NPLOC4-218ENST00000574964 WT1P19544 449 aaPredicted RBP13.66□□□□□ -0.22
NPLOC4-218ENST00000574964 ALDH9A1P49189 494 aa13.66□□□□□ -0.22
NPLOC4-218ENST00000574964 HSD17B7P56937 341 aa13.66□□□□□ -0.22
NPLOC4-218ENST00000574964 TAS2R50P59544 299 aa13.66□□□□□ -0.22
NPLOC4-218ENST00000574964 RAE1P78406 368 aaKnown RBP13.66□□□□□ -0.22
NPLOC4-218ENST00000574964 BTG2P78543 158 aa13.66□□□□□ -0.22
NPLOC4-218ENST00000574964 ZNF763Q0D2J5 394 aa13.66□□□□□ -0.22
NPLOC4-218ENST00000574964 STX4Q12846 297 aa13.66□□□□□ -0.22
NPLOC4-218ENST00000574964 MAD2L1Q13257 205 aaPredicted RBP13.66□□□□□ -0.22
NPLOC4-218ENST00000574964 IL10RAQ13651 578 aa13.66□□□□□ -0.22
NPLOC4-218ENST00000574964 NSDHLQ15738 373 aa13.66□□□□□ -0.22
NPLOC4-218ENST00000574964 UGT8Q16880 541 aa13.66□□□□□ -0.22
NPLOC4-218ENST00000574964 RFTN2Q52LD8 501 aaPredicted RBP13.66□□□□□ -0.22
NPLOC4-218ENST00000574964 C6orf136Q5SQH8 315 aa13.66□□□□□ -0.22
NPLOC4-218ENST00000574964 C18orf63Q68DL7 685 aa13.66□□□□□ -0.22
NPLOC4-218ENST00000574964 NXNQ6DKJ4 435 aa13.66□□□□□ -0.22
NPLOC4-218ENST00000574964 GALNT18Q6P9A2 607 aa13.66□□□□□ -0.22
NPLOC4-218ENST00000574964 PLPP5Q8NEB5 264 aa13.66□□□□□ -0.22
NPLOC4-218ENST00000574964 C16orf78Q8WTQ4 265 aa13.66□□□□□ -0.22
NPLOC4-218ENST00000574964 IP6K3Q96PC2 410 aa13.66□□□□□ -0.22
NPLOC4-218ENST00000574964 VN1R1Q9GZP7 353 aa13.66□□□□□ -0.22
NPLOC4-218ENST00000574964 MEAF6Q9HAF1 191 aa13.66□□□□□ -0.22
NPLOC4-218ENST00000574964 PRDM9Q9NQV7 894 aa13.66□□□□□ -0.22
NPLOC4-218ENST00000574964 LANCL2Q9NS86 450 aa13.66□□□□□ -0.22
NPLOC4-218ENST00000574964 EIF3LQ9Y262 564 aaKnown RBP13.66□□□□□ -0.22
NPLOC4-218ENST00000574964 USH1CQ9Y6N9 552 aa13.66□□□□□ -0.22
NPLOC4-218ENST00000574964 DOCK10Q96BY6 2186 aa13.66□□□□□ -0.22
NPLOC4-218ENST00000574964 NUP214P35658 2090 aaPredicted RBP13.65□□□□□ -0.22
NPLOC4-218ENST00000574964 GOLGA8QA0A0J9YX86 632 aa13.65□□□□□ -0.22
NPLOC4-218ENST00000574964 A0A1W2PR48 441 aa13.65□□□□□ -0.22
NPLOC4-218ENST00000574964 C1orf226A1L170 272 aa13.65□□□□□ -0.22
NPLOC4-218ENST00000574964 GOLGA8OA6NCC3 632 aa13.65□□□□□ -0.22
NPLOC4-218ENST00000574964 OR2W5A6NFC9 320 aa13.65□□□□□ -0.22
NPLOC4-218ENST00000574964 GOLGA8NF8WBI6 632 aa13.65□□□□□ -0.22
NPLOC4-218ENST00000574964 CYR61O00622 381 aa13.65□□□□□ -0.22
NPLOC4-218ENST00000574964 DIAPH2O60879 1101 aa13.65□□□□□ -0.22
NPLOC4-218ENST00000574964 CTNSO60931 367 aa13.65□□□□□ -0.22
NPLOC4-218ENST00000574964 AIFM1O95831 613 aa13.65□□□□□ -0.22
NPLOC4-218ENST00000574964 RECKO95980 971 aa13.65□□□□□ -0.22
NPLOC4-218ENST00000574964 CYC1P08574 325 aa13.65□□□□□ -0.22
NPLOC4-218ENST00000574964 LBPP18428 481 aa13.65□□□□□ -0.22
NPLOC4-218ENST00000574964 MMP11P24347 488 aa13.65□□□□□ -0.22
NPLOC4-218ENST00000574964 PPP2R1BP30154 601 aa13.65□□□□□ -0.22
NPLOC4-218ENST00000574964 GSTM5P46439 218 aa13.65□□□□□ -0.22
NPLOC4-218ENST00000574964 HNRNPFP52597 415 aaKnown RBP13.65□□□□□ -0.22
NPLOC4-218ENST00000574964 VAC14Q08AM6 782 aa13.65□□□□□ -0.22
NPLOC4-218ENST00000574964 C2orf80Q0P641 193 aa13.65□□□□□ -0.22
NPLOC4-218ENST00000574964 HEPACAMQ14CZ8 416 aa13.65□□□□□ -0.22
NPLOC4-218ENST00000574964 KIAA0040Q15053 153 aa13.65□□□□□ -0.22
NPLOC4-218ENST00000574964 NDUFAF5Q5TEU4 345 aa13.65□□□□□ -0.22
NPLOC4-218ENST00000574964 VWA5B1Q5TIE3 1220 aa13.65□□□□□ -0.22
NPLOC4-218ENST00000574964 QSOX2Q6ZRP7 698 aa13.65□□□□□ -0.22
NPLOC4-218ENST00000574964 CLNKQ7Z7G1 428 aa13.65□□□□□ -0.22
NPLOC4-218ENST00000574964 TMEM151BQ8IW70 566 aa13.65□□□□□ -0.22
NPLOC4-218ENST00000574964 TMEM132CQ8N3T6 1108 aa13.65□□□□□ -0.22
NPLOC4-218ENST00000574964 TANKQ92844 425 aa13.65□□□□□ -0.22
NPLOC4-218ENST00000574964 TM4SF18Q96CE8 201 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms