RNA–Protein interactions for RNA: ENST00000573827.1

SMG6-214, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-214ENST00000573827 DCAKDQ8WVC6 231 aa16.23■□□□□ 0.19
SMG6-214ENST00000573827 VMP1Q96GC9 406 aa16.23■□□□□ 0.19
SMG6-214ENST00000573827 GPR137Q96N19 417 aa16.23■□□□□ 0.19
SMG6-214ENST00000573827 FMO2Q99518 471 aa16.23■□□□□ 0.19
SMG6-214ENST00000573827 OR51B5Q9H339 312 aa16.23■□□□□ 0.19
SMG6-214ENST00000573827 DMRT3Q9NQL9 472 aa16.23■□□□□ 0.19
SMG6-214ENST00000573827 MRPS33Q9Y291 106 aaKnown RBP16.23■□□□□ 0.19
SMG6-214ENST00000573827 ZNF835Q9Y2P0 537 aa16.23■□□□□ 0.19
SMG6-214ENST00000573827 ZNF407Q9C0G0 2248 aa16.22■□□□□ 0.19
SMG6-214ENST00000573827 NCOA6Q14686 2063 aaPredicted RBP16.22■□□□□ 0.19
SMG6-214ENST00000573827 POLQO75417 2590 aa16.22■□□□□ 0.19
SMG6-214ENST00000573827 MYOCOSA0A1B0GUC4 107 aa16.22■□□□□ 0.19
SMG6-214ENST00000573827 A0A1B0GUH1 482 aa16.22■□□□□ 0.19
SMG6-214ENST00000573827 H0YIV9 168 aa16.22■□□□□ 0.19
SMG6-214ENST00000573827 SH3BGRLO75368 114 aa16.22■□□□□ 0.19
SMG6-214ENST00000573827 ETHE1O95571 254 aa16.22■□□□□ 0.19
SMG6-214ENST00000573827 SBK3P0C264 359 aa16.22■□□□□ 0.19
SMG6-214ENST00000573827 EEF1DP29692 281 aaKnown RBP16.22■□□□□ 0.19
SMG6-214ENST00000573827 DCTP40126 519 aa16.22■□□□□ 0.19
SMG6-214ENST00000573827 CYB561P49447 251 aa16.22■□□□□ 0.19
SMG6-214ENST00000573827 OC90Q02509 493 aaPredicted RBP16.22■□□□□ 0.19
SMG6-214ENST00000573827 TGM3Q08188 693 aa16.22■□□□□ 0.19
SMG6-214ENST00000573827 UAP1Q16222 522 aaPredicted RBP16.22■□□□□ 0.19
SMG6-214ENST00000573827 GLE1Q53GS7 698 aaKnown RBP16.22■□□□□ 0.19
SMG6-214ENST00000573827 LIPJQ5W064 366 aa16.22■□□□□ 0.19
SMG6-214ENST00000573827 ZNF787Q6DD87 383 aa16.22■□□□□ 0.19
SMG6-214ENST00000573827 METTL2BQ6P1Q9 378 aaKnown RBP16.22■□□□□ 0.19
SMG6-214ENST00000573827 GOLGA7Q7Z5G4 137 aa16.22■□□□□ 0.19
SMG6-214ENST00000573827 PNPLA5Q7Z6Z6 429 aaPredicted RBP16.22■□□□□ 0.19
SMG6-214ENST00000573827 FJX1Q86VR8 437 aa16.22■□□□□ 0.19
SMG6-214ENST00000573827 ZNF321PQ8N8H1 164 aa16.22■□□□□ 0.19
SMG6-214ENST00000573827 L3MBTL4Q8NA19 623 aa16.22■□□□□ 0.19
SMG6-214ENST00000573827 TMEM178AQ8NBL3 297 aa16.22■□□□□ 0.19
SMG6-214ENST00000573827 SRFBP1Q8NEF9 429 aaKnown RBP16.22■□□□□ 0.19
SMG6-214ENST00000573827 WDR20Q8TBZ3 569 aa16.22■□□□□ 0.19
SMG6-214ENST00000573827 CMTM7Q96FZ5 175 aa16.22■□□□□ 0.19
SMG6-214ENST00000573827 PAFAH2Q99487 392 aa16.22■□□□□ 0.19
SMG6-214ENST00000573827 ROGDIQ9GZN7 287 aa16.22■□□□□ 0.19
SMG6-214ENST00000573827 COPS7BQ9H9Q2 264 aaPredicted RBP16.22■□□□□ 0.19
SMG6-214ENST00000573827 MTRF1LQ9UGC7 380 aaKnown RBP16.22■□□□□ 0.19
SMG6-214ENST00000573827 SAP18O00422 153 aaKnown RBP16.21■□□□□ 0.19
SMG6-214ENST00000573827 PLPP1O14494 284 aa16.21■□□□□ 0.19
SMG6-214ENST00000573827 OR7A17O14581 309 aa16.21■□□□□ 0.19
SMG6-214ENST00000573827 UGDHO60701 494 aa16.21■□□□□ 0.19
SMG6-214ENST00000573827 ZNF354AO60765 605 aaPredicted RBP16.21■□□□□ 0.19
SMG6-214ENST00000573827 LDB3O75112 727 aa16.21■□□□□ 0.19
SMG6-214ENST00000573827 PCNAP12004 261 aa16.21■□□□□ 0.19
SMG6-214ENST00000573827 GFAPP14136 432 aa16.21■□□□□ 0.19
SMG6-214ENST00000573827 GCAP28676 217 aa16.21■□□□□ 0.19
SMG6-214ENST00000573827 CA7P43166 264 aa16.21■□□□□ 0.19
SMG6-214ENST00000573827 GTF2H2Q13888 395 aa16.21■□□□□ 0.19
SMG6-214ENST00000573827 MRM1Q6IN84 353 aaKnown RBP16.21■□□□□ 0.19
SMG6-214ENST00000573827 GTF2H2CQ6P1K8 395 aa16.21■□□□□ 0.19
SMG6-214ENST00000573827 Q6ZPB1 254 aaPredicted RBP16.21■□□□□ 0.19
SMG6-214ENST00000573827 CEP128Q6ZU80 1094 aa16.21■□□□□ 0.19
SMG6-214ENST00000573827 CHSY3Q70JA7 882 aa16.21■□□□□ 0.19
SMG6-214ENST00000573827 MDGA2Q7Z553 956 aa16.21■□□□□ 0.19
SMG6-214ENST00000573827 FGD2Q7Z6J4 655 aa16.21■□□□□ 0.19
SMG6-214ENST00000573827 ZCCHC7Q8N3Z6 543 aaKnown RBP16.21■□□□□ 0.19
SMG6-214ENST00000573827 CPSF7Q8N684 471 aaKnown RBP16.21■□□□□ 0.19
SMG6-214ENST00000573827 HORMAD2Q8N7B1 307 aa16.21■□□□□ 0.19
SMG6-214ENST00000573827 IFT81Q8WYA0 676 aa16.21■□□□□ 0.19
SMG6-214ENST00000573827 ZNF592Q92610 1267 aa16.21■□□□□ 0.19
SMG6-214ENST00000573827 ALOXE3Q9BYJ1 711 aa16.21■□□□□ 0.19
SMG6-214ENST00000573827 TSPYL1Q9H0U9 437 aa16.21■□□□□ 0.19
SMG6-214ENST00000573827 TSPAN10Q9H1Z9 355 aaPredicted RBP16.21■□□□□ 0.19
SMG6-214ENST00000573827 ZBTB26Q9HCK0 441 aa16.21■□□□□ 0.19
SMG6-214ENST00000573827 ADGRE2Q9UHX3 823 aa16.21■□□□□ 0.19
SMG6-214ENST00000573827 ZNF180Q9UJW8 692 aa16.21■□□□□ 0.19
SMG6-214ENST00000573827 RNF11Q9Y3C5 154 aa16.21■□□□□ 0.19
SMG6-214ENST00000573827 AKAP9Q99996 3911 aa16.21■□□□□ 0.19
SMG6-214ENST00000573827 FGF17O60258 216 aa16.2■□□□□ 0.18
SMG6-214ENST00000573827 ITGA10O75578 1167 aa16.2■□□□□ 0.18
SMG6-214ENST00000573827 CTAGE8P0CG41 777 aa16.2■□□□□ 0.18
SMG6-214ENST00000573827 BSGP35613 385 aa16.2■□□□□ 0.18
SMG6-214ENST00000573827 ARFIP1P53367 373 aa16.2■□□□□ 0.18
SMG6-214ENST00000573827 HNRNPH2P55795 449 aaKnown RBP16.2■□□□□ 0.18
SMG6-214ENST00000573827 PER3P56645 1201 aa16.2■□□□□ 0.18
SMG6-214ENST00000573827 RPS13P62277 151 aaKnown RBP16.2■□□□□ 0.18
SMG6-214ENST00000573827 ID2Q02363 134 aa16.2■□□□□ 0.18
SMG6-214ENST00000573827 RCN2Q14257 317 aa16.2■□□□□ 0.18
SMG6-214ENST00000573827 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.2■□□□□ 0.18
SMG6-214ENST00000573827 AP5B1Q2VPB7 878 aa16.2■□□□□ 0.18
SMG6-214ENST00000573827 OR4C11Q6IEV9 310 aa16.2■□□□□ 0.18
SMG6-214ENST00000573827 CTAGE4Q8IX94 777 aa16.2■□□□□ 0.18
SMG6-214ENST00000573827 TMEM132CQ8N3T6 1108 aa16.2■□□□□ 0.18
SMG6-214ENST00000573827 PTGR2Q8N8N7 351 aaPredicted RBP16.2■□□□□ 0.18
SMG6-214ENST00000573827 MORN4Q8NDC4 146 aa16.2■□□□□ 0.18
SMG6-214ENST00000573827 MNS1Q8NEH6 495 aa16.2■□□□□ 0.18
SMG6-214ENST00000573827 OR52B6Q8NGF0 335 aa16.2■□□□□ 0.18
SMG6-214ENST00000573827 OR14A16Q8NHC5 309 aa16.2■□□□□ 0.18
SMG6-214ENST00000573827 ITLN2Q8WWU7 325 aaPredicted RBP16.2■□□□□ 0.18
SMG6-214ENST00000573827 CCDC120Q96HB5 630 aa16.2■□□□□ 0.18
SMG6-214ENST00000573827 MTERF1Q99551 399 aaKnown RBP16.2■□□□□ 0.18
SMG6-214ENST00000573827 VPS11Q9H270 941 aa16.2■□□□□ 0.18
SMG6-214ENST00000573827 IPPKQ9H8X2 491 aa16.2■□□□□ 0.18
SMG6-214ENST00000573827 PSD3Q9NYI0 1048 aa16.2■□□□□ 0.18
SMG6-214ENST00000573827 FBXW2Q9UKT8 454 aa16.2■□□□□ 0.18
SMG6-214ENST00000573827 PPT2Q9UMR5 302 aa16.2■□□□□ 0.18
SMG6-214ENST00000573827 ATG4BQ9Y4P1 393 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms