RNA–Protein interactions for RNA: ENST00000573328.5

NPLOC4-212, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-212ENST00000573328 MRGPRGQ86SM5 289 aa9□□□□□ -0.97
NPLOC4-212ENST00000573328 ISCA2Q86U28 154 aa9□□□□□ -0.97
NPLOC4-212ENST00000573328 GHDCQ8N2G8 530 aa9□□□□□ -0.97
NPLOC4-212ENST00000573328 OR14A16Q8NHC5 309 aa9□□□□□ -0.97
NPLOC4-212ENST00000573328 ZNF473Q8WTR7 871 aaKnown RBP9□□□□□ -0.97
NPLOC4-212ENST00000573328 ASB15Q8WXK1 588 aa9□□□□□ -0.97
NPLOC4-212ENST00000573328 DAZLQ92904 295 aaKnown RBP9□□□□□ -0.97
NPLOC4-212ENST00000573328 CMTM7Q96FZ5 175 aa9□□□□□ -0.97
NPLOC4-212ENST00000573328 MAPKAP1Q9BPZ7 522 aa9□□□□□ -0.97
NPLOC4-212ENST00000573328 TBCDQ9BTW9 1192 aa9□□□□□ -0.97
NPLOC4-212ENST00000573328 ALOXE3Q9BYJ1 711 aa9□□□□□ -0.97
NPLOC4-212ENST00000573328 OR8D2Q9GZM6 311 aa9□□□□□ -0.97
NPLOC4-212ENST00000573328 VPS11Q9H270 941 aa9□□□□□ -0.97
NPLOC4-212ENST00000573328 ACTR8Q9H981 624 aa9□□□□□ -0.97
NPLOC4-212ENST00000573328 IGSF5Q9NSI5 407 aa9□□□□□ -0.97
NPLOC4-212ENST00000573328 HPF1Q9NWY4 346 aa9□□□□□ -0.97
NPLOC4-212ENST00000573328 IKBKGQ9Y6K9 419 aa9□□□□□ -0.97
NPLOC4-212ENST00000573328 DNAJC13O75165 2243 aa8.99□□□□□ -0.97
NPLOC4-212ENST00000573328 ZNF407Q9C0G0 2248 aa8.99□□□□□ -0.97
NPLOC4-212ENST00000573328 A0A096LPK6 155 aa8.99□□□□□ -0.97
NPLOC4-212ENST00000573328 C17orf105B2RV13 164 aa8.99□□□□□ -0.97
NPLOC4-212ENST00000573328 KLRC4-KLRK1H3BQV0 150 aa8.99□□□□□ -0.97
NPLOC4-212ENST00000573328 CYR61O00622 381 aa8.99□□□□□ -0.97
NPLOC4-212ENST00000573328 ASNA1O43681 348 aa8.99□□□□□ -0.97
NPLOC4-212ENST00000573328 CDC40O60508 579 aaKnown RBP eCLIP8.99□□□□□ -0.97
NPLOC4-212ENST00000573328 CTNSO60931 367 aa8.99□□□□□ -0.97
NPLOC4-212ENST00000573328 ZFAND5O76080 213 aa8.99□□□□□ -0.97
NPLOC4-212ENST00000573328 ACSL3O95573 720 aa8.99□□□□□ -0.97
NPLOC4-212ENST00000573328 C2P06681 752 aa8.99□□□□□ -0.97
NPLOC4-212ENST00000573328 INHBAP08476 426 aa8.99□□□□□ -0.97
NPLOC4-212ENST00000573328 COX7A2P14406 83 aa8.99□□□□□ -0.97
NPLOC4-212ENST00000573328 HIST1H1TP22492 207 aaPredicted RBP8.99□□□□□ -0.97
NPLOC4-212ENST00000573328 ATP5A1P25705 553 aaKnown RBP8.99□□□□□ -0.97
NPLOC4-212ENST00000573328 TRHRP34981 398 aaPredicted RBP8.99□□□□□ -0.97
NPLOC4-212ENST00000573328 CASP2P42575 452 aa8.99□□□□□ -0.97
NPLOC4-212ENST00000573328 GPR85P60893 370 aa8.99□□□□□ -0.97
NPLOC4-212ENST00000573328 HSF1Q00613 529 aa8.99□□□□□ -0.97
NPLOC4-212ENST00000573328 ID2Q02363 134 aa8.99□□□□□ -0.97
NPLOC4-212ENST00000573328 SERTAD2Q14140 314 aa8.99□□□□□ -0.97
NPLOC4-212ENST00000573328 SETDB1Q15047 1291 aa8.99□□□□□ -0.97
NPLOC4-212ENST00000573328 ACAP2Q15057 778 aa8.99□□□□□ -0.97
NPLOC4-212ENST00000573328 WHAMMP3Q1A5X7 153 aa8.99□□□□□ -0.97
NPLOC4-212ENST00000573328 TMEM35AQ53FP2 167 aa8.99□□□□□ -0.97
NPLOC4-212ENST00000573328 RPTNQ6XPR3 784 aa8.99□□□□□ -0.97
NPLOC4-212ENST00000573328 HSDL2Q6YN16 418 aa8.99□□□□□ -0.97
NPLOC4-212ENST00000573328 TAOK1Q7L7X3 1001 aa8.99□□□□□ -0.97
NPLOC4-212ENST00000573328 SPPL2CQ8IUH8 684 aa8.99□□□□□ -0.97
NPLOC4-212ENST00000573328 LAS2Q8IYD9 372 aa8.99□□□□□ -0.97
NPLOC4-212ENST00000573328 CENPLQ8N0S6 344 aaPredicted RBP8.99□□□□□ -0.97
NPLOC4-212ENST00000573328 SLC34A3Q8N130 599 aa8.99□□□□□ -0.97
NPLOC4-212ENST00000573328 RNF175Q8N4F7 328 aa8.99□□□□□ -0.97
NPLOC4-212ENST00000573328 ZNF808Q8N4W9 903 aaPredicted RBP8.99□□□□□ -0.97
NPLOC4-212ENST00000573328 ACOT4Q8N9L9 421 aa8.99□□□□□ -0.97
NPLOC4-212ENST00000573328 OR7G3Q8NG95 312 aa8.99□□□□□ -0.97
NPLOC4-212ENST00000573328 RHEBL1Q8TAI7 183 aa8.99□□□□□ -0.97
NPLOC4-212ENST00000573328 ITLN2Q8WWU7 325 aaPredicted RBP8.99□□□□□ -0.97
NPLOC4-212ENST00000573328 IFT81Q8WYA0 676 aa8.99□□□□□ -0.97
NPLOC4-212ENST00000573328 MARVELD3Q96A59 401 aa8.99□□□□□ -0.97
NPLOC4-212ENST00000573328 REPS1Q96D71 796 aa8.99□□□□□ -0.97
NPLOC4-212ENST00000573328 SCYL1Q96KG9 808 aa8.99□□□□□ -0.97
NPLOC4-212ENST00000573328 MTERF1Q99551 399 aaKnown RBP8.99□□□□□ -0.97
NPLOC4-212ENST00000573328 OR51B5Q9H339 312 aa8.99□□□□□ -0.97
NPLOC4-212ENST00000573328 LIN28AQ9H9Z2 209 aaKnown RBP8.99□□□□□ -0.97
NPLOC4-212ENST00000573328 LYRM4Q9HD34 91 aa8.99□□□□□ -0.97
NPLOC4-212ENST00000573328 TIMMDC1Q9NPL8 285 aa8.99□□□□□ -0.97
NPLOC4-212ENST00000573328 PRDM7Q9NQW5 492 aa8.99□□□□□ -0.97
NPLOC4-212ENST00000573328 NINJ2Q9NZG7 142 aa8.99□□□□□ -0.97
NPLOC4-212ENST00000573328 KCMF1Q9P0J7 381 aa8.99□□□□□ -0.97
NPLOC4-212ENST00000573328 COPS7AQ9UBW8 275 aa8.99□□□□□ -0.97
NPLOC4-212ENST00000573328 ADGRE2Q9UHX3 823 aa8.99□□□□□ -0.97
NPLOC4-212ENST00000573328 ZNF223Q9UK11 482 aaPredicted RBP8.99□□□□□ -0.97
NPLOC4-212ENST00000573328 YARS2Q9Y2Z4 477 aaKnown RBP8.99□□□□□ -0.97
NPLOC4-212ENST00000573328 NOTCH2Q04721 2471 aa8.99□□□□□ -0.97
NPLOC4-212ENST00000573328 LRBAP50851 2863 aa8.98□□□□□ -0.97
NPLOC4-212ENST00000573328 PHF3Q92576 2039 aaKnown RBP8.98□□□□□ -0.97
NPLOC4-212ENST00000573328 WWP2O00308 870 aa8.98□□□□□ -0.97
NPLOC4-212ENST00000573328 PRRG2O14669 202 aa8.98□□□□□ -0.97
NPLOC4-212ENST00000573328 ZNHIT1O43257 154 aa8.98□□□□□ -0.97
NPLOC4-212ENST00000573328 HNRNPRO43390 633 aaKnown RBP8.98□□□□□ -0.97
NPLOC4-212ENST00000573328 DYRK3O43781 588 aa8.98□□□□□ -0.97
NPLOC4-212ENST00000573328 PEX1O43933 1283 aa8.98□□□□□ -0.97
NPLOC4-212ENST00000573328 PRKNO60260 465 aaPredicted RBP8.98□□□□□ -0.97
NPLOC4-212ENST00000573328 OR2J2O76002 312 aa8.98□□□□□ -0.97
NPLOC4-212ENST00000573328 WISP2O76076 250 aa8.98□□□□□ -0.97
NPLOC4-212ENST00000573328 KLHL2O95198 593 aa8.98□□□□□ -0.97
NPLOC4-212ENST00000573328 TUBB4AP04350 444 aa8.98□□□□□ -0.97
NPLOC4-212ENST00000573328 TLX1P31314 330 aaPredicted RBP8.98□□□□□ -0.97
NPLOC4-212ENST00000573328 BUD31P41223 144 aaPredicted RBP8.98□□□□□ -0.97
NPLOC4-212ENST00000573328 PIK3CGP48736 1102 aa8.98□□□□□ -0.97
NPLOC4-212ENST00000573328 SMSP52788 366 aa8.98□□□□□ -0.97
NPLOC4-212ENST00000573328 ALDH18A1P54886 795 aaKnown RBP8.98□□□□□ -0.97
NPLOC4-212ENST00000573328 PLGLB1Q02325 96 aa8.98□□□□□ -0.97
NPLOC4-212ENST00000573328 SLAMF1Q13291 335 aa8.98□□□□□ -0.97
NPLOC4-212ENST00000573328 GTF2H2Q13888 395 aa8.98□□□□□ -0.97
NPLOC4-212ENST00000573328 CPSF6Q16630 551 aaKnown RBP eCLIP8.98□□□□□ -0.97
NPLOC4-212ENST00000573328 KHDRBS2Q5VWX1 349 aaKnown RBP8.98□□□□□ -0.97
NPLOC4-212ENST00000573328 LIPJQ5W064 366 aa8.98□□□□□ -0.97
NPLOC4-212ENST00000573328 SP5Q6BEB4 398 aaPredicted RBP8.98□□□□□ -0.97
NPLOC4-212ENST00000573328 OR4C11Q6IEV9 310 aa8.98□□□□□ -0.97
NPLOC4-212ENST00000573328 GTF2H2CQ6P1K8 395 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms