RNA–Protein interactions for RNA: ENST00000573108.1

TRIM25-207, Transcript of tripartite motif containing 25, humanhuman

TSL 3

Gene TRIM25, Length 952 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM25-207ENST00000573108 ZFP62Q8NB50 900 aaPredicted RBP11.23□□□□□ -0.61
TRIM25-207ENST00000573108 B3GNT7Q8NFL0 401 aa11.23□□□□□ -0.61
TRIM25-207ENST00000573108 LILRB4Q8NHJ6 448 aa11.23□□□□□ -0.61
TRIM25-207ENST00000573108 SLC44A1Q8WWI5 657 aa11.23□□□□□ -0.61
TRIM25-207ENST00000573108 SLC5A11Q8WWX8 675 aa11.23□□□□□ -0.61
TRIM25-207ENST00000573108 NRGNQ92686 78 aa11.23□□□□□ -0.61
TRIM25-207ENST00000573108 SMIM10Q96HG1 83 aa11.23□□□□□ -0.61
TRIM25-207ENST00000573108 DEFB127Q9H1M4 99 aa11.23□□□□□ -0.61
TRIM25-207ENST00000573108 LIN28AQ9H9Z2 209 aaKnown RBP11.23□□□□□ -0.61
TRIM25-207ENST00000573108 PLSCR2Q9NRY7 297 aa11.23□□□□□ -0.61
TRIM25-207ENST00000573108 DEPPQ9NTK1 212 aa11.23□□□□□ -0.61
TRIM25-207ENST00000573108 TNFRSF10DQ9UBN6 386 aa11.23□□□□□ -0.61
TRIM25-207ENST00000573108 PTBP2Q9UKA9 531 aaKnown RBP11.23□□□□□ -0.61
TRIM25-207ENST00000573108 FBXW2Q9UKT8 454 aa11.23□□□□□ -0.61
TRIM25-207ENST00000573108 ACOT9Q9Y305 439 aa11.23□□□□□ -0.61
TRIM25-207ENST00000573108 PHF3Q92576 2039 aaKnown RBP11.23□□□□□ -0.61
TRIM25-207ENST00000573108 PINLYPA6NC86 204 aa11.22□□□□□ -0.61
TRIM25-207ENST00000573108 POC1B-GALNT4F8VUJ3 575 aa11.22□□□□□ -0.61
TRIM25-207ENST00000573108 TGFBR3LH3BV60 316 aa11.22□□□□□ -0.61
TRIM25-207ENST00000573108 PSMD12O00232 456 aaPredicted RBP11.22□□□□□ -0.61
TRIM25-207ENST00000573108 PRAMEF4O60810 478 aa11.22□□□□□ -0.61
TRIM25-207ENST00000573108 WDR47O94967 919 aa11.22□□□□□ -0.61
TRIM25-207ENST00000573108 LTA4HP09960 611 aaKnown RBP11.22□□□□□ -0.61
TRIM25-207ENST00000573108 MSX1P28360 303 aa11.22□□□□□ -0.61
TRIM25-207ENST00000573108 CHRNB4P30926 498 aa11.22□□□□□ -0.61
TRIM25-207ENST00000573108 GGT5P36269 586 aa11.22□□□□□ -0.61
TRIM25-207ENST00000573108 CLCN2P51788 898 aa11.22□□□□□ -0.61
TRIM25-207ENST00000573108 ART1P52961 327 aa11.22□□□□□ -0.61
TRIM25-207ENST00000573108 NUP107P57740 925 aa11.22□□□□□ -0.61
TRIM25-207ENST00000573108 TOR1AIP1Q5JTV8 583 aa11.22□□□□□ -0.61
TRIM25-207ENST00000573108 PRAMEF9Q5VWM5 478 aa11.22□□□□□ -0.61
TRIM25-207ENST00000573108 TMEM211Q6ICI0 200 aa11.22□□□□□ -0.61
TRIM25-207ENST00000573108 NIPAL1Q6NVV3 410 aa11.22□□□□□ -0.61
TRIM25-207ENST00000573108 NXPE4Q6UWF7 544 aa11.22□□□□□ -0.61
TRIM25-207ENST00000573108 DMRTC2Q8IXT2 367 aaPredicted RBP11.22□□□□□ -0.61
TRIM25-207ENST00000573108 KLHDC8AQ8IYD2 350 aa11.22□□□□□ -0.61
TRIM25-207ENST00000573108 TBC1D19Q8N5T2 526 aa11.22□□□□□ -0.61
TRIM25-207ENST00000573108 TMEM156Q8N614 296 aa11.22□□□□□ -0.61
TRIM25-207ENST00000573108 TMEM52Q8NDY8 209 aa11.22□□□□□ -0.61
TRIM25-207ENST00000573108 KCTD4Q8WVF5 259 aa11.22□□□□□ -0.61
TRIM25-207ENST00000573108 ASB5Q8WWX0 329 aa11.22□□□□□ -0.61
TRIM25-207ENST00000573108 SREK1Q8WXA9 508 aaKnown RBP11.22□□□□□ -0.61
TRIM25-207ENST00000573108 SEC16BQ96JE7 1060 aa11.22□□□□□ -0.61
TRIM25-207ENST00000573108 GPR78Q96P69 363 aa11.22□□□□□ -0.61
TRIM25-207ENST00000573108 TMEM79Q9BSE2 394 aa11.22□□□□□ -0.61
TRIM25-207ENST00000573108 TXLNGYQ9BZA5 131 aa11.22□□□□□ -0.61
TRIM25-207ENST00000573108 TP63Q9H3D4 680 aaPredicted RBP11.22□□□□□ -0.61
TRIM25-207ENST00000573108 ALG9Q9H6U8 611 aa11.22□□□□□ -0.61
TRIM25-207ENST00000573108 NMRAL1Q9HBL8 299 aa11.22□□□□□ -0.61
TRIM25-207ENST00000573108 SNX15Q9NRS6 342 aa11.22□□□□□ -0.61
TRIM25-207ENST00000573108 PNO1Q9NRX1 252 aaKnown RBP11.22□□□□□ -0.61
TRIM25-207ENST00000573108 CD274Q9NZQ7 290 aa11.22□□□□□ -0.61
TRIM25-207ENST00000573108 KCMF1Q9P0J7 381 aa11.22□□□□□ -0.61
TRIM25-207ENST00000573108 CLDN16Q9Y5I7 305 aa11.22□□□□□ -0.61
TRIM25-207ENST00000573108 EML6Q6ZMW3 1958 aa11.21□□□□□ -0.61
TRIM25-207ENST00000573108 A0A096LPK6 155 aa11.21□□□□□ -0.61
TRIM25-207ENST00000573108 A0A0G2JMM0 328 aa11.21□□□□□ -0.61
TRIM25-207ENST00000573108 A0A0G2JN53 185 aa11.21□□□□□ -0.61
TRIM25-207ENST00000573108 A0A1W2PPB8 328 aa11.21□□□□□ -0.61
TRIM25-207ENST00000573108 A0A1W2PRS3 328 aa11.21□□□□□ -0.61
TRIM25-207ENST00000573108 TMEM200CA6NKL6 621 aa11.21□□□□□ -0.61
TRIM25-207ENST00000573108 KIR3DP1A8MWS1 328 aa11.21□□□□□ -0.61
TRIM25-207ENST00000573108 ALDOAP04075 364 aaKnown RBP11.21□□□□□ -0.61
TRIM25-207ENST00000573108 TYK2P29597 1187 aa11.21□□□□□ -0.61
TRIM25-207ENST00000573108 HSPA7P48741 367 aa11.21□□□□□ -0.61
TRIM25-207ENST00000573108 GPR143P51810 404 aa11.21□□□□□ -0.61
TRIM25-207ENST00000573108 HNRNPFP52597 415 aaKnown RBP11.21□□□□□ -0.61
TRIM25-207ENST00000573108 PMPCAQ10713 525 aa11.21□□□□□ -0.61
TRIM25-207ENST00000573108 RUNX2Q13950 521 aa11.21□□□□□ -0.61
TRIM25-207ENST00000573108 RBBP5Q15291 538 aaKnown RBP11.21□□□□□ -0.61
TRIM25-207ENST00000573108 CDKL4Q5MAI5 379 aa11.21□□□□□ -0.61
TRIM25-207ENST00000573108 SULT1C3Q6IMI6 304 aa11.21□□□□□ -0.61
TRIM25-207ENST00000573108 ARHGAP11AQ6P4F7 1023 aa11.21□□□□□ -0.61
TRIM25-207ENST00000573108 SLCO4C1Q6ZQN7 724 aa11.21□□□□□ -0.61
TRIM25-207ENST00000573108 TMPRSS11BQ86T26 416 aa11.21□□□□□ -0.61
TRIM25-207ENST00000573108 TBC1D1Q86TI0 1168 aaPredicted RBP11.21□□□□□ -0.61
TRIM25-207ENST00000573108 SCUBE1Q8IWY4 988 aa11.21□□□□□ -0.61
TRIM25-207ENST00000573108 PLD6Q8N2A8 252 aaKnown RBP11.21□□□□□ -0.61
TRIM25-207ENST00000573108 ARMC2Q8NEN0 867 aa11.21□□□□□ -0.61
TRIM25-207ENST00000573108 STAG3L4Q8TBR4 150 aa11.21□□□□□ -0.61
TRIM25-207ENST00000573108 CREB3L4Q8TEY5 395 aa11.21□□□□□ -0.61
TRIM25-207ENST00000573108 DCAKDQ8WVC6 231 aa11.21□□□□□ -0.61
TRIM25-207ENST00000573108 RND1Q92730 232 aa11.21□□□□□ -0.61
TRIM25-207ENST00000573108 EXT2Q93063 718 aa11.21□□□□□ -0.61
TRIM25-207ENST00000573108 NCLNQ969V3 563 aa11.21□□□□□ -0.61
TRIM25-207ENST00000573108 ATOH8Q96SQ7 321 aa11.21□□□□□ -0.61
TRIM25-207ENST00000573108 PAFAH2Q99487 392 aa11.21□□□□□ -0.61
TRIM25-207ENST00000573108 PELI2Q9HAT8 420 aa11.21□□□□□ -0.61
TRIM25-207ENST00000573108 CLK4Q9HAZ1 481 aaKnown RBP11.21□□□□□ -0.61
TRIM25-207ENST00000573108 KCNJ16Q9NPI9 418 aa11.21□□□□□ -0.61
TRIM25-207ENST00000573108 RNF112Q9ULX5 631 aa11.21□□□□□ -0.61
TRIM25-207ENST00000573108 DYRK1BQ9Y463 629 aa11.21□□□□□ -0.61
TRIM25-207ENST00000573108 KCNE2Q9Y6J6 123 aa11.21□□□□□ -0.61
TRIM25-207ENST00000573108 A0A087WUV0 522 aaPredicted RBP11.2□□□□□ -0.62
TRIM25-207ENST00000573108 A0A087X1B8 175 aa11.2□□□□□ -0.62
TRIM25-207ENST00000573108 URADA6NGE7 173 aa11.2□□□□□ -0.62
TRIM25-207ENST00000573108 FAM166BA8MTA8 275 aa11.2□□□□□ -0.62
TRIM25-207ENST00000573108 NPIPA2E9PIF3 369 aa11.2□□□□□ -0.62
TRIM25-207ENST00000573108 NPIPA3F8WFD2 350 aa11.2□□□□□ -0.62
TRIM25-207ENST00000573108 G3V3Y1 287 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms