RNA–Protein interactions for RNA: ENST00000572579.1

CHD3-214, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 931 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-214ENST00000572579 TGFB1P01137 390 aa16.83■□□□□ 0.28
CHD3-214ENST00000572579 KIR3DL1P43629 444 aa16.83■□□□□ 0.28
CHD3-214ENST00000572579 ETF1P62495 437 aaKnown RBP16.83■□□□□ 0.28
CHD3-214ENST00000572579 SLC7A5Q01650 507 aa16.83■□□□□ 0.28
CHD3-214ENST00000572579 XKRXQ6PP77 449 aa16.83■□□□□ 0.28
CHD3-214ENST00000572579 DGAT2L6Q6ZPD8 337 aa16.83■□□□□ 0.28
CHD3-214ENST00000572579 CCDC25Q86WR0 208 aa16.83■□□□□ 0.28
CHD3-214ENST00000572579 ZNF295-AS1Q8N0V1 137 aa16.83■□□□□ 0.28
CHD3-214ENST00000572579 GHDCQ8N2G8 530 aa16.83■□□□□ 0.28
CHD3-214ENST00000572579 ZFP62Q8NB50 900 aaPredicted RBP16.83■□□□□ 0.28
CHD3-214ENST00000572579 OR7G3Q8NG95 312 aa16.83■□□□□ 0.28
CHD3-214ENST00000572579 OR52N2Q8NGI0 321 aa16.83■□□□□ 0.28
CHD3-214ENST00000572579 C16orf52Q8NHV5 167 aa16.83■□□□□ 0.28
CHD3-214ENST00000572579 STAG3L4Q8TBR4 150 aa16.83■□□□□ 0.28
CHD3-214ENST00000572579 UBTD2Q8WUN7 234 aa16.83■□□□□ 0.28
CHD3-214ENST00000572579 KCTD4Q8WVF5 259 aa16.83■□□□□ 0.28
CHD3-214ENST00000572579 GPR78Q96P69 363 aa16.83■□□□□ 0.28
CHD3-214ENST00000572579 PHACTR1Q9C0D0 580 aa16.83■□□□□ 0.28
CHD3-214ENST00000572579 LYRM4Q9HD34 91 aa16.83■□□□□ 0.28
CHD3-214ENST00000572579 ADAP2Q9NPF8 381 aa16.83■□□□□ 0.28
CHD3-214ENST00000572579 ZDHHC18Q9NUE0 388 aa16.83■□□□□ 0.28
CHD3-214ENST00000572579 A0A1B0GTH9 108 aa16.82■□□□□ 0.28
CHD3-214ENST00000572579 WWP2O00308 870 aa16.82■□□□□ 0.28
CHD3-214ENST00000572579 HS6ST1O60243 411 aa16.82■□□□□ 0.28
CHD3-214ENST00000572579 KERAO60938 352 aa16.82■□□□□ 0.28
CHD3-214ENST00000572579 ZFAND5O76080 213 aa16.82■□□□□ 0.28
CHD3-214ENST00000572579 SCELO95171 688 aa16.82■□□□□ 0.28
CHD3-214ENST00000572579 SNRPB2P08579 225 aaKnown RBP16.82■□□□□ 0.28
CHD3-214ENST00000572579 LTA4HP09960 611 aaKnown RBP16.82■□□□□ 0.28
CHD3-214ENST00000572579 CASQ1P31415 396 aa16.82■□□□□ 0.28
CHD3-214ENST00000572579 BMPR2Q13873 1038 aa16.82■□□□□ 0.28
CHD3-214ENST00000572579 SLMAPQ14BN4 828 aa16.82■□□□□ 0.28
CHD3-214ENST00000572579 ELAVL1Q15717 326 aaKnown RBP16.82■□□□□ 0.28
CHD3-214ENST00000572579 MTFR2Q6P444 385 aa16.82■□□□□ 0.28
CHD3-214ENST00000572579 LRRC70Q7Z2Q7 622 aa16.82■□□□□ 0.28
CHD3-214ENST00000572579 OR4N5Q8IXE1 308 aa16.82■□□□□ 0.28
CHD3-214ENST00000572579 CYP4Z2PQ8N1L4 340 aa16.82■□□□□ 0.28
CHD3-214ENST00000572579 MARVELD2Q8N4S9 558 aa16.82■□□□□ 0.28
CHD3-214ENST00000572579 FAM98AQ8NCA5 519 aaKnown RBP16.82■□□□□ 0.28
CHD3-214ENST00000572579 TMEM125Q96AQ2 219 aa16.82■□□□□ 0.28
CHD3-214ENST00000572579 KCNC2Q96PR1 638 aa16.82■□□□□ 0.28
CHD3-214ENST00000572579 OR51B5Q9H339 312 aa16.82■□□□□ 0.28
CHD3-214ENST00000572579 NUDT4Q9NZJ9 180 aa16.82■□□□□ 0.28
CHD3-214ENST00000572579 MYOTQ9UBF9 498 aa16.82■□□□□ 0.28
CHD3-214ENST00000572579 YARS2Q9Y2Z4 477 aaKnown RBP16.82■□□□□ 0.28
CHD3-214ENST00000572579 UTP11Q9Y3A2 253 aaKnown RBP16.82■□□□□ 0.28
CHD3-214ENST00000572579 NCOA6Q14686 2063 aaPredicted RBP16.82■□□□□ 0.28
CHD3-214ENST00000572579 HRKO00198 91 aa16.81■□□□□ 0.28
CHD3-214ENST00000572579 IFNA16P05015 189 aa16.81■□□□□ 0.28
CHD3-214ENST00000572579 C2P06681 752 aa16.81■□□□□ 0.28
CHD3-214ENST00000572579 ESRRAP11474 423 aaPredicted RBP16.81■□□□□ 0.28
CHD3-214ENST00000572579 AGAP20933 346 aa16.81■□□□□ 0.28
CHD3-214ENST00000572579 HIST1H1TP22492 207 aaPredicted RBP16.81■□□□□ 0.28
CHD3-214ENST00000572579 CRABP2P29373 138 aa16.81■□□□□ 0.28
CHD3-214ENST00000572579 SOX3P41225 446 aa16.81■□□□□ 0.28
CHD3-214ENST00000572579 SSR4P51571 173 aa16.81■□□□□ 0.28
CHD3-214ENST00000572579 CASP6P55212 293 aa16.81■□□□□ 0.28
CHD3-214ENST00000572579 LAPTM5Q13571 262 aa16.81■□□□□ 0.28
CHD3-214ENST00000572579 RAPH1Q70E73 1250 aa16.81■□□□□ 0.28
CHD3-214ENST00000572579 TMEM156Q8N614 296 aa16.81■□□□□ 0.28
CHD3-214ENST00000572579 DOK4Q8TEW6 326 aa16.81■□□□□ 0.28
CHD3-214ENST00000572579 ZNF721Q8TF20 911 aa16.81■□□□□ 0.28
CHD3-214ENST00000572579 UCN3Q969E3 161 aa16.81■□□□□ 0.28
CHD3-214ENST00000572579 RASL10BQ96S79 203 aa16.81■□□□□ 0.28
CHD3-214ENST00000572579 TBCDQ9BTW9 1192 aa16.81■□□□□ 0.28
CHD3-214ENST00000572579 ZNF717Q9BY31 904 aaPredicted RBP16.81■□□□□ 0.28
CHD3-214ENST00000572579 TRIM8Q9BZR9 551 aa16.81■□□□□ 0.28
CHD3-214ENST00000572579 NMRAL1Q9HBL8 299 aa16.81■□□□□ 0.28
CHD3-214ENST00000572579 PLSCR2Q9NRY7 297 aa16.81■□□□□ 0.28
CHD3-214ENST00000572579 KLF13Q9Y2Y9 288 aaPredicted RBP16.81■□□□□ 0.28
CHD3-214ENST00000572579 TACC2O95359 2948 aa16.8■□□□□ 0.28
CHD3-214ENST00000572579 A0A088AWK7 358 aa16.8■□□□□ 0.28
CHD3-214ENST00000572579 SUPT3HB4E1H0 165 aa16.8■□□□□ 0.28
CHD3-214ENST00000572579 K7EPI3 171 aa16.8■□□□□ 0.28
CHD3-214ENST00000572579 FGF17O60258 216 aa16.8■□□□□ 0.28
CHD3-214ENST00000572579 SUPT3HO75486 399 aa16.8■□□□□ 0.28
CHD3-214ENST00000572579 PRKRAO75569 313 aaKnown RBP16.8■□□□□ 0.28
CHD3-214ENST00000572579 PDE9AO76083 593 aa16.8■□□□□ 0.28
CHD3-214ENST00000572579 PCNAP12004 261 aa16.8■□□□□ 0.28
CHD3-214ENST00000572579 ABOP16442 354 aa16.8■□□□□ 0.28
CHD3-214ENST00000572579 ZNF10P21506 573 aaPredicted RBP16.8■□□□□ 0.28
CHD3-214ENST00000572579 HK2P52789 917 aa16.8■□□□□ 0.28
CHD3-214ENST00000572579 CAV1Q03135 178 aa16.8■□□□□ 0.28
CHD3-214ENST00000572579 ZNF750Q32MQ0 723 aa16.8■□□□□ 0.28
CHD3-214ENST00000572579 TMEM35AQ53FP2 167 aa16.8■□□□□ 0.28
CHD3-214ENST00000572579 EMC4Q5J8M3 183 aa16.8■□□□□ 0.28
CHD3-214ENST00000572579 PAGE2BQ5JRK9 111 aa16.8■□□□□ 0.28
CHD3-214ENST00000572579 DEPDC1Q5TB30 811 aa16.8■□□□□ 0.28
CHD3-214ENST00000572579 MROH9Q5TGP6 573 aa16.8■□□□□ 0.28
CHD3-214ENST00000572579 MED27Q6P2C8 311 aa16.8■□□□□ 0.28
CHD3-214ENST00000572579 IL20RBQ6UXL0 311 aa16.8■□□□□ 0.28
CHD3-214ENST00000572579 TMEM132CQ8N3T6 1108 aa16.8■□□□□ 0.28
CHD3-214ENST00000572579 MORN4Q8NDC4 146 aa16.8■□□□□ 0.28
CHD3-214ENST00000572579 HUS1BQ8NHY5 278 aa16.8■□□□□ 0.28
CHD3-214ENST00000572579 SLC2A12Q8TD20 617 aa16.8■□□□□ 0.28
CHD3-214ENST00000572579 MRRFQ96E11 262 aaKnown RBP16.8■□□□□ 0.28
CHD3-214ENST00000572579 LRRC1Q9BTT6 524 aa16.8■□□□□ 0.28
CHD3-214ENST00000572579 OR8D2Q9GZM6 311 aa16.8■□□□□ 0.28
CHD3-214ENST00000572579 MRPS33Q9Y291 106 aaKnown RBP16.8■□□□□ 0.28
CHD3-214ENST00000572579 CLCA3PQ9Y6N3 262 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms