RNA–Protein interactions for RNA: ENST00000572043.5

CTDNEP1-207, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3 BASIC

Gene CTDNEP1, Length 857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-207ENST00000572043 LRFN1Q9P244 771 aa16.6■□□□□ 0.25
CTDNEP1-207ENST00000572043 ADGRE2Q9UHX3 823 aa16.6■□□□□ 0.25
CTDNEP1-207ENST00000572043 PCTPQ9UKL6 214 aa16.6■□□□□ 0.25
CTDNEP1-207ENST00000572043 H0YIV9 168 aa16.59■□□□□ 0.25
CTDNEP1-207ENST00000572043 PRKRAO75569 313 aaKnown RBP16.59■□□□□ 0.25
CTDNEP1-207ENST00000572043 CLDN9O95484 217 aa16.59■□□□□ 0.25
CTDNEP1-207ENST00000572043 ETHE1O95571 254 aa16.59■□□□□ 0.25
CTDNEP1-207ENST00000572043 COL6A2P12110 1019 aa16.59■□□□□ 0.25
CTDNEP1-207ENST00000572043 CD46P15529 392 aa16.59■□□□□ 0.25
CTDNEP1-207ENST00000572043 TSPAN8P19075 237 aa16.59■□□□□ 0.25
CTDNEP1-207ENST00000572043 PIK3CBP42338 1070 aa16.59■□□□□ 0.25
CTDNEP1-207ENST00000572043 MLF1P58340 268 aa16.59■□□□□ 0.25
CTDNEP1-207ENST00000572043 SLC29A2Q14542 456 aa16.59■□□□□ 0.25
CTDNEP1-207ENST00000572043 SGO1Q5FBB7 561 aa16.59■□□□□ 0.25
CTDNEP1-207ENST00000572043 FAM219BQ5XKK7 198 aa16.59■□□□□ 0.25
CTDNEP1-207ENST00000572043 ZNF324BQ6AW86 544 aaPredicted RBP16.59■□□□□ 0.25
CTDNEP1-207ENST00000572043 HIST2H2BCQ6DN03 193 aa16.59■□□□□ 0.25
CTDNEP1-207ENST00000572043 C16orf47Q6ZP98 133 aaPredicted RBP16.59■□□□□ 0.25
CTDNEP1-207ENST00000572043 L3MBTL4Q8NA19 623 aa16.59■□□□□ 0.25
CTDNEP1-207ENST00000572043 VMP1Q96GC9 406 aa16.59■□□□□ 0.25
CTDNEP1-207ENST00000572043 MRPL57Q9BQC6 102 aaKnown RBP16.59■□□□□ 0.25
CTDNEP1-207ENST00000572043 MRPL46Q9H2W6 279 aaKnown RBP16.59■□□□□ 0.25
CTDNEP1-207ENST00000572043 ZBTB26Q9HCK0 441 aa16.59■□□□□ 0.25
CTDNEP1-207ENST00000572043 ZNF223Q9UK11 482 aaPredicted RBP16.59■□□□□ 0.25
CTDNEP1-207ENST00000572043 SLC5A6Q9Y289 635 aa16.59■□□□□ 0.25
CTDNEP1-207ENST00000572043 SHANK1Q9Y566 2161 aa16.59■□□□□ 0.25
CTDNEP1-207ENST00000572043 UBR5O95071 2799 aaPredicted RBP16.59■□□□□ 0.25
CTDNEP1-207ENST00000572043 DOCK10Q96BY6 2186 aa16.58■□□□□ 0.25
CTDNEP1-207ENST00000572043 STX16-NPEPL1H3BU86 382 aa16.58■□□□□ 0.24
CTDNEP1-207ENST00000572043 GOLGA8RI6L899 631 aa16.58■□□□□ 0.24
CTDNEP1-207ENST00000572043 FCHO1O14526 889 aa16.58■□□□□ 0.24
CTDNEP1-207ENST00000572043 STX16O14662 325 aa16.58■□□□□ 0.24
CTDNEP1-207ENST00000572043 FGF17O60258 216 aa16.58■□□□□ 0.24
CTDNEP1-207ENST00000572043 PRKNO60260 465 aaPredicted RBP16.58■□□□□ 0.24
CTDNEP1-207ENST00000572043 UGDHO60701 494 aa16.58■□□□□ 0.24
CTDNEP1-207ENST00000572043 EEDO75530 441 aaKnown RBP16.58■□□□□ 0.24
CTDNEP1-207ENST00000572043 NEURL1O76050 574 aa16.58■□□□□ 0.24
CTDNEP1-207ENST00000572043 WISP2O76076 250 aa16.58■□□□□ 0.24
CTDNEP1-207ENST00000572043 SCELO95171 688 aa16.58■□□□□ 0.24
CTDNEP1-207ENST00000572043 CRYABP02511 175 aaKnown RBP16.58■□□□□ 0.24
CTDNEP1-207ENST00000572043 GBAP04062 536 aa16.58■□□□□ 0.24
CTDNEP1-207ENST00000572043 PTX3P26022 381 aaPredicted RBP16.58■□□□□ 0.24
CTDNEP1-207ENST00000572043 TDGF1P3P51864 188 aa16.58■□□□□ 0.24
CTDNEP1-207ENST00000572043 CDH13P55290 713 aa16.58■□□□□ 0.24
CTDNEP1-207ENST00000572043 ELAVL1Q15717 326 aaKnown RBP16.58■□□□□ 0.24
CTDNEP1-207ENST00000572043 MAPKAPK3Q16644 382 aa16.58■□□□□ 0.24
CTDNEP1-207ENST00000572043 C18orf63Q68DL7 685 aa16.58■□□□□ 0.24
CTDNEP1-207ENST00000572043 TTC19Q6DKK2 380 aaPredicted RBP16.58■□□□□ 0.24
CTDNEP1-207ENST00000572043 SLC25A25Q6KCM7 469 aa16.58■□□□□ 0.24
CTDNEP1-207ENST00000572043 ADGRD1Q6QNK2 874 aa16.58■□□□□ 0.24
CTDNEP1-207ENST00000572043 GFRALQ6UXV0 394 aa16.58■□□□□ 0.24
CTDNEP1-207ENST00000572043 GALNTL5Q7Z4T8 443 aa16.58■□□□□ 0.24
CTDNEP1-207ENST00000572043 LGI4Q8N135 537 aa16.58■□□□□ 0.24
CTDNEP1-207ENST00000572043 ZNF321PQ8N8H1 164 aa16.58■□□□□ 0.24
CTDNEP1-207ENST00000572043 WDR20Q8TBZ3 569 aa16.58■□□□□ 0.24
CTDNEP1-207ENST00000572043 DOK4Q8TEW6 326 aa16.58■□□□□ 0.24
CTDNEP1-207ENST00000572043 CCDC77Q9BR77 488 aa16.58■□□□□ 0.24
CTDNEP1-207ENST00000572043 OR8D2Q9GZM6 311 aa16.58■□□□□ 0.24
CTDNEP1-207ENST00000572043 TSPAN10Q9H1Z9 355 aaPredicted RBP16.58■□□□□ 0.24
CTDNEP1-207ENST00000572043 TMEM216Q9P0N5 145 aa16.58■□□□□ 0.24
CTDNEP1-207ENST00000572043 TBK1Q9UHD2 729 aa16.58■□□□□ 0.24
CTDNEP1-207ENST00000572043 TMCO1Q9UM00 188 aa16.58■□□□□ 0.24
CTDNEP1-207ENST00000572043 CLCA3PQ9Y6N3 262 aa16.58■□□□□ 0.24
CTDNEP1-207ENST00000572043 A8MT66 165 aa16.57■□□□□ 0.24
CTDNEP1-207ENST00000572043 C17orf105B2RV13 164 aa16.57■□□□□ 0.24
CTDNEP1-207ENST00000572043 PPP6CO00743 305 aa16.57■□□□□ 0.24
CTDNEP1-207ENST00000572043 LRRTM2O43300 516 aa16.57■□□□□ 0.24
CTDNEP1-207ENST00000572043 SLC25A12O75746 678 aa16.57■□□□□ 0.24
CTDNEP1-207ENST00000572043 UNC5CO95185 931 aa16.57■□□□□ 0.24
CTDNEP1-207ENST00000572043 SP1P08047 785 aa16.57■□□□□ 0.24
CTDNEP1-207ENST00000572043 SBK3P0C264 359 aa16.57■□□□□ 0.24
CTDNEP1-207ENST00000572043 GP1BBP13224 206 aa16.57■□□□□ 0.24
CTDNEP1-207ENST00000572043 CYB561P49447 251 aa16.57■□□□□ 0.24
CTDNEP1-207ENST00000572043 HNRNPH2P55795 449 aaKnown RBP16.57■□□□□ 0.24
CTDNEP1-207ENST00000572043 TERF2Q15554 542 aa16.57■□□□□ 0.24
CTDNEP1-207ENST00000572043 METTL2BQ6P1Q9 378 aaKnown RBP16.57■□□□□ 0.24
CTDNEP1-207ENST00000572043 MILR1Q7Z6M3 343 aa16.57■□□□□ 0.24
CTDNEP1-207ENST00000572043 PNPLA5Q7Z6Z6 429 aaPredicted RBP16.57■□□□□ 0.24
CTDNEP1-207ENST00000572043 GPR180Q86V85 440 aa16.57■□□□□ 0.24
CTDNEP1-207ENST00000572043 TMEM132CQ8N3T6 1108 aa16.57■□□□□ 0.24
CTDNEP1-207ENST00000572043 HORMAD2Q8N7B1 307 aa16.57■□□□□ 0.24
CTDNEP1-207ENST00000572043 TMEM178AQ8NBL3 297 aa16.57■□□□□ 0.24
CTDNEP1-207ENST00000572043 PTPMT1Q8WUK0 201 aaPredicted RBP16.57■□□□□ 0.24
CTDNEP1-207ENST00000572043 ANKRD9Q96BM1 317 aaPredicted RBP16.57■□□□□ 0.24
CTDNEP1-207ENST00000572043 MTBPQ96DY7 904 aa16.57■□□□□ 0.24
CTDNEP1-207ENST00000572043 SCMH1Q96GD3 660 aa16.57■□□□□ 0.24
CTDNEP1-207ENST00000572043 TXLNGYQ9BZA5 131 aa16.57■□□□□ 0.24
CTDNEP1-207ENST00000572043 EPB41L4BQ9H329 900 aa16.57■□□□□ 0.24
CTDNEP1-207ENST00000572043 SEC14L3Q9UDX4 400 aa16.57■□□□□ 0.24
CTDNEP1-207ENST00000572043 ATG4BQ9Y4P1 393 aa16.57■□□□□ 0.24
CTDNEP1-207ENST00000572043 IQANK1A0A1B0GTG1 560 aa16.56■□□□□ 0.24
CTDNEP1-207ENST00000572043 A0A1B0GTL3 188 aa16.56■□□□□ 0.24
CTDNEP1-207ENST00000572043 GLOD5A6NK44 160 aa16.56■□□□□ 0.24
CTDNEP1-207ENST00000572043 WASHC1A8K0Z3 465 aa16.56■□□□□ 0.24
CTDNEP1-207ENST00000572043 TMPRSS11DO60235 418 aa16.56■□□□□ 0.24
CTDNEP1-207ENST00000572043 ITGA10O75578 1167 aa16.56■□□□□ 0.24
CTDNEP1-207ENST00000572043 ZFAND5O76080 213 aa16.56■□□□□ 0.24
CTDNEP1-207ENST00000572043 RPS17P08708 135 aaKnown RBP16.56■□□□□ 0.24
CTDNEP1-207ENST00000572043 GPR143P51810 404 aa16.56■□□□□ 0.24
CTDNEP1-207ENST00000572043 TNFRSF17Q02223 184 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms