RNA–Protein interactions for RNA: ENST00000569062.1

ABCA3-206, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 5

Gene ABCA3, Length 900 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-206ENST00000569062 RCN2Q14257 317 aa18.8■□□□□ 0.6
ABCA3-206ENST00000569062 TERF2Q15554 542 aa18.8■□□□□ 0.6
ABCA3-206ENST00000569062 TSNAXIP1Q2TAA8 658 aa18.8■□□□□ 0.6
ABCA3-206ENST00000569062 OR4C11Q6IEV9 310 aa18.8■□□□□ 0.6
ABCA3-206ENST00000569062 TRMT10CQ7L0Y3 403 aaKnown RBP18.8■□□□□ 0.6
ABCA3-206ENST00000569062 L3MBTL4Q8NA19 623 aa18.8■□□□□ 0.6
ABCA3-206ENST00000569062 OR52B6Q8NGF0 335 aa18.8■□□□□ 0.6
ABCA3-206ENST00000569062 THAP3Q8WTV1 239 aaPredicted RBP18.8■□□□□ 0.6
ABCA3-206ENST00000569062 NCLNQ969V3 563 aa18.8■□□□□ 0.6
ABCA3-206ENST00000569062 ADAP2Q9NPF8 381 aa18.8■□□□□ 0.6
ABCA3-206ENST00000569062 LRFN1Q9P244 771 aa18.8■□□□□ 0.6
ABCA3-206ENST00000569062 PPIEQ9UNP9 301 aaKnown RBP18.8■□□□□ 0.6
ABCA3-206ENST00000569062 SLC5A6Q9Y289 635 aa18.8■□□□□ 0.6
ABCA3-206ENST00000569062 ICE1Q9Y2F5 2266 aa18.8■□□□□ 0.6
ABCA3-206ENST00000569062 STX16-NPEPL1H3BU86 382 aa18.79■□□□□ 0.6
ABCA3-206ENST00000569062 PLPP1O14494 284 aa18.79■□□□□ 0.6
ABCA3-206ENST00000569062 STX16O14662 325 aa18.79■□□□□ 0.6
ABCA3-206ENST00000569062 IFNA16P05015 189 aa18.79■□□□□ 0.6
ABCA3-206ENST00000569062 SBK3P0C264 359 aa18.79■□□□□ 0.6
ABCA3-206ENST00000569062 GP1BBP13224 206 aa18.79■□□□□ 0.6
ABCA3-206ENST00000569062 NEK2P51955 445 aa18.79■□□□□ 0.6
ABCA3-206ENST00000569062 RAP1GDS1P52306 607 aa18.79■□□□□ 0.6
ABCA3-206ENST00000569062 SLAMF1Q13291 335 aa18.79■□□□□ 0.6
ABCA3-206ENST00000569062 METTL2BQ6P1Q9 378 aaKnown RBP18.79■□□□□ 0.6
ABCA3-206ENST00000569062 ADGRD1Q6QNK2 874 aa18.79■□□□□ 0.6
ABCA3-206ENST00000569062 GSPT2Q8IYD1 628 aaKnown RBP18.79■□□□□ 0.6
ABCA3-206ENST00000569062 DNAJB8Q8NHS0 232 aa18.79■□□□□ 0.6
ABCA3-206ENST00000569062 WDR20Q8TBZ3 569 aa18.79■□□□□ 0.6
ABCA3-206ENST00000569062 RGMAQ96B86 450 aa18.79■□□□□ 0.6
ABCA3-206ENST00000569062 SCMH1Q96GD3 660 aa18.79■□□□□ 0.6
ABCA3-206ENST00000569062 NSUN5Q96P11 429 aaKnown RBP18.79■□□□□ 0.6
ABCA3-206ENST00000569062 ALOXE3Q9BYJ1 711 aa18.79■□□□□ 0.6
ABCA3-206ENST00000569062 TXLNGYQ9BZA5 131 aa18.79■□□□□ 0.6
ABCA3-206ENST00000569062 ZBTB26Q9HCK0 441 aa18.79■□□□□ 0.6
ABCA3-206ENST00000569062 PCTPQ9UKL6 214 aa18.79■□□□□ 0.6
ABCA3-206ENST00000569062 PCDHGB6Q9Y5F9 930 aa18.79■□□□□ 0.6
ABCA3-206ENST00000569062 POLEQ07864 2286 aa18.79■□□□□ 0.6
ABCA3-206ENST00000569062 WIPF3A6NGB9 483 aa18.78■□□□□ 0.6
ABCA3-206ENST00000569062 PRKNO60260 465 aaPredicted RBP18.78■□□□□ 0.6
ABCA3-206ENST00000569062 SMIM24O75264 130 aa18.78■□□□□ 0.6
ABCA3-206ENST00000569062 WISP2O76076 250 aa18.78■□□□□ 0.6
ABCA3-206ENST00000569062 CLDN9O95484 217 aa18.78■□□□□ 0.6
ABCA3-206ENST00000569062 ETHE1O95571 254 aa18.78■□□□□ 0.6
ABCA3-206ENST00000569062 LDLRP01130 860 aa18.78■□□□□ 0.6
ABCA3-206ENST00000569062 CRYABP02511 175 aaKnown RBP18.78■□□□□ 0.6
ABCA3-206ENST00000569062 CD46P15529 392 aa18.78■□□□□ 0.6
ABCA3-206ENST00000569062 CPN2P22792 545 aa18.78■□□□□ 0.6
ABCA3-206ENST00000569062 ARL1P40616 181 aaPredicted RBP18.78■□□□□ 0.6
ABCA3-206ENST00000569062 KCNK10P57789 538 aa18.78■□□□□ 0.6
ABCA3-206ENST00000569062 ID2Q02363 134 aa18.78■□□□□ 0.6
ABCA3-206ENST00000569062 STX4Q12846 297 aa18.78■□□□□ 0.6
ABCA3-206ENST00000569062 ZRSR2Q15696 482 aaKnown RBP18.78■□□□□ 0.6
ABCA3-206ENST00000569062 ELAVL1Q15717 326 aaKnown RBP18.78■□□□□ 0.6
ABCA3-206ENST00000569062 RPS27LQ71UM5 84 aaKnown RBP18.78■□□□□ 0.6
ABCA3-206ENST00000569062 ZNF227Q86WZ6 799 aa18.78■□□□□ 0.6
ABCA3-206ENST00000569062 ARMC10Q8N2F6 343 aa18.78■□□□□ 0.6
ABCA3-206ENST00000569062 TMEM151AQ8N4L1 468 aa18.78■□□□□ 0.6
ABCA3-206ENST00000569062 ATP6V1E2Q96A05 226 aa18.78■□□□□ 0.6
ABCA3-206ENST00000569062 REPS1Q96D71 796 aa18.78■□□□□ 0.6
ABCA3-206ENST00000569062 MTFMTQ96DP5 389 aaKnown RBP18.78■□□□□ 0.6
ABCA3-206ENST00000569062 VMP1Q96GC9 406 aa18.78■□□□□ 0.6
ABCA3-206ENST00000569062 C5orf34Q96MH7 638 aa18.78■□□□□ 0.6
ABCA3-206ENST00000569062 MRPL57Q9BQC6 102 aaKnown RBP18.78■□□□□ 0.6
ABCA3-206ENST00000569062 ZNF717Q9BY31 904 aaPredicted RBP18.78■□□□□ 0.6
ABCA3-206ENST00000569062 MRPL46Q9H2W6 279 aaKnown RBP18.78■□□□□ 0.6
ABCA3-206ENST00000569062 VTI1BQ9UEU0 232 aa18.78■□□□□ 0.6
ABCA3-206ENST00000569062 TMCO1Q9UM00 188 aa18.78■□□□□ 0.6
ABCA3-206ENST00000569062 SPACA6W5XKT8 324 aa18.78■□□□□ 0.6
ABCA3-206ENST00000569062 SPTAN1Q13813 2472 aaKnown RBP18.77■□□□□ 0.6
ABCA3-206ENST00000569062 DDAH2O95865 285 aa18.77■□□□□ 0.6
ABCA3-206ENST00000569062 SP1P08047 785 aa18.77■□□□□ 0.6
ABCA3-206ENST00000569062 PTX3P26022 381 aaPredicted RBP18.77■□□□□ 0.6
ABCA3-206ENST00000569062 CCNG1P51959 295 aa18.77■□□□□ 0.6
ABCA3-206ENST00000569062 PHEXP78562 749 aa18.77■□□□□ 0.6
ABCA3-206ENST00000569062 SLC29A2Q14542 456 aa18.77■□□□□ 0.6
ABCA3-206ENST00000569062 LGSNQ5TDP6 509 aa18.77■□□□□ 0.6
ABCA3-206ENST00000569062 HIST2H2BCQ6DN03 193 aa18.77■□□□□ 0.6
ABCA3-206ENST00000569062 GALNTL5Q7Z4T8 443 aa18.77■□□□□ 0.6
ABCA3-206ENST00000569062 TMEM132CQ8N3T6 1108 aa18.77■□□□□ 0.6
ABCA3-206ENST00000569062 TMEM178AQ8NBL3 297 aa18.77■□□□□ 0.6
ABCA3-206ENST00000569062 PTPMT1Q8WUK0 201 aaPredicted RBP18.77■□□□□ 0.6
ABCA3-206ENST00000569062 ANKRD9Q96BM1 317 aaPredicted RBP18.77■□□□□ 0.6
ABCA3-206ENST00000569062 CENPKQ9BS16 269 aa18.77■□□□□ 0.6
ABCA3-206ENST00000569062 EPB41L4BQ9H329 900 aa18.77■□□□□ 0.6
ABCA3-206ENST00000569062 LIN28AQ9H9Z2 209 aaKnown RBP18.77■□□□□ 0.6
ABCA3-206ENST00000569062 SEMA4BQ9NPR2 832 aaPredicted RBP18.77■□□□□ 0.6
ABCA3-206ENST00000569062 CLCA3PQ9Y6N3 262 aa18.77■□□□□ 0.6
ABCA3-206ENST00000569062 A1L4Q6 167 aa18.76■□□□□ 0.59
ABCA3-206ENST00000569062 FCHO1O14526 889 aa18.76■□□□□ 0.59
ABCA3-206ENST00000569062 LRRTM2O43300 516 aa18.76■□□□□ 0.59
ABCA3-206ENST00000569062 PRKRAO75569 313 aaKnown RBP18.76■□□□□ 0.59
ABCA3-206ENST00000569062 TRHRP34981 398 aaPredicted RBP18.76■□□□□ 0.59
ABCA3-206ENST00000569062 BSGP35613 385 aa18.76■□□□□ 0.59
ABCA3-206ENST00000569062 CYB561P49447 251 aa18.76■□□□□ 0.59
ABCA3-206ENST00000569062 HNRNPH2P55795 449 aaKnown RBP18.76■□□□□ 0.59
ABCA3-206ENST00000569062 TRAF3Q13114 568 aa18.76■□□□□ 0.59
ABCA3-206ENST00000569062 MAPKAPK3Q16644 382 aa18.76■□□□□ 0.59
ABCA3-206ENST00000569062 C4orf17Q53FE4 359 aa18.76■□□□□ 0.59
ABCA3-206ENST00000569062 C18orf63Q68DL7 685 aa18.76■□□□□ 0.59
ABCA3-206ENST00000569062 SLC25A25Q6KCM7 469 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms