RNA–Protein interactions for RNA: ENST00000568239.1

SMG1-215, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 2,978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-215ENST00000568239 A0A1W2PR48 441 aa6.7□□□□□ -1.34
SMG1-215ENST00000568239 SEC16AO15027 2179 aa6.7□□□□□ -1.34
SMG1-215ENST00000568239 PGRMC2O15173 223 aa6.7□□□□□ -1.34
SMG1-215ENST00000568239 P2RX6O15547 441 aa6.7□□□□□ -1.34
SMG1-215ENST00000568239 GUCY1B2O75343 617 aa6.7□□□□□ -1.34
SMG1-215ENST00000568239 UBXN7O94888 489 aa6.7□□□□□ -1.34
SMG1-215ENST00000568239 UBTFL6P0CB48 400 aaPredicted RBP6.7□□□□□ -1.34
SMG1-215ENST00000568239 ZCCHC18P0CG32 403 aa6.7□□□□□ -1.34
SMG1-215ENST00000568239 DDX5P17844 614 aaKnown RBP6.7□□□□□ -1.34
SMG1-215ENST00000568239 FEN1P39748 380 aaKnown RBP6.7□□□□□ -1.34
SMG1-215ENST00000568239 AFF3P51826 1226 aaKnown RBP6.7□□□□□ -1.34
SMG1-215ENST00000568239 NCBP2P52298 156 aaKnown RBP eCLIP6.7□□□□□ -1.34
SMG1-215ENST00000568239 PRKAG1P54619 331 aa6.7□□□□□ -1.34
SMG1-215ENST00000568239 VSX2P58304 361 aaPredicted RBP6.7□□□□□ -1.34
SMG1-215ENST00000568239 NXPH1P58417 271 aa6.7□□□□□ -1.34
SMG1-215ENST00000568239 OLR1P78380 273 aa6.7□□□□□ -1.34
SMG1-215ENST00000568239 PPP1R8Q12972 351 aaKnown RBP6.7□□□□□ -1.34
SMG1-215ENST00000568239 TP53BP2Q13625 1128 aa6.7□□□□□ -1.34
SMG1-215ENST00000568239 ZNF750Q32MQ0 723 aa6.7□□□□□ -1.34
SMG1-215ENST00000568239 ADPRMQ3LIE5 342 aa6.7□□□□□ -1.34
SMG1-215ENST00000568239 WDR45BQ5MNZ6 344 aa6.7□□□□□ -1.34
SMG1-215ENST00000568239 OTUD3Q5T2D3 398 aaPredicted RBP6.7□□□□□ -1.34
SMG1-215ENST00000568239 TMEM214Q6NUQ4 689 aaKnown RBP6.7□□□□□ -1.34
SMG1-215ENST00000568239 ERICH5Q6P6B1 374 aa6.7□□□□□ -1.34
SMG1-215ENST00000568239 ISLR2Q6UXK2 745 aa6.7□□□□□ -1.34
SMG1-215ENST00000568239 FAM92BQ6ZTR7 304 aa6.7□□□□□ -1.34
SMG1-215ENST00000568239 IQCHQ86VS3 1027 aa6.7□□□□□ -1.34
SMG1-215ENST00000568239 ZC3H7AQ8IWR0 971 aaKnown RBP6.7□□□□□ -1.34
SMG1-215ENST00000568239 ZZZ3Q8IYH5 903 aa6.7□□□□□ -1.34
SMG1-215ENST00000568239 CBR4Q8N4T8 237 aa6.7□□□□□ -1.34
SMG1-215ENST00000568239 CAMKVQ8NCB2 501 aa6.7□□□□□ -1.34
SMG1-215ENST00000568239 ZBED6CLQ96FA7 236 aaPredicted RBP6.7□□□□□ -1.34
SMG1-215ENST00000568239 CENPNQ96H22 339 aaPredicted RBP6.7□□□□□ -1.34
SMG1-215ENST00000568239 NECAB3Q96P71 396 aaPredicted RBP6.7□□□□□ -1.34
SMG1-215ENST00000568239 BDH2Q9BUT1 245 aa6.7□□□□□ -1.34
SMG1-215ENST00000568239 SARGQ9BW04 601 aa6.7□□□□□ -1.34
SMG1-215ENST00000568239 PCED1AQ9H1Q7 454 aa6.7□□□□□ -1.34
SMG1-215ENST00000568239 CXorf36Q9H7Y0 433 aa6.7□□□□□ -1.34
SMG1-215ENST00000568239 AGPAT4Q9NRZ5 378 aa6.7□□□□□ -1.34
SMG1-215ENST00000568239 DCAF13Q9NV06 445 aaKnown RBP6.7□□□□□ -1.34
SMG1-215ENST00000568239 ANKMY1Q9P2S6 941 aa6.7□□□□□ -1.34
SMG1-215ENST00000568239 WBP11Q9Y2W2 641 aaKnown RBP6.7□□□□□ -1.34
SMG1-215ENST00000568239 WDR87Q6ZQQ6 2873 aa6.7□□□□□ -1.34
SMG1-215ENST00000568239 FAM221BA6H8Z2 402 aa6.7□□□□□ -1.34
SMG1-215ENST00000568239 URADA6NGE7 173 aa6.7□□□□□ -1.34
SMG1-215ENST00000568239 C19orf67A6NJJ6 358 aa6.7□□□□□ -1.34
SMG1-215ENST00000568239 H0YGG7 62 aa6.7□□□□□ -1.34
SMG1-215ENST00000568239 SOCS2O14508 198 aa6.7□□□□□ -1.34
SMG1-215ENST00000568239 AIFM1O95831 613 aa6.7□□□□□ -1.34
SMG1-215ENST00000568239 CST1P01037 141 aa6.7□□□□□ -1.34
SMG1-215ENST00000568239 BMP2P12643 396 aa6.7□□□□□ -1.34
SMG1-215ENST00000568239 DRD2P14416 443 aa6.7□□□□□ -1.34
SMG1-215ENST00000568239 UQCRBP14927 111 aa6.7□□□□□ -1.34
SMG1-215ENST00000568239 ST6GAL1P15907 406 aa6.7□□□□□ -1.34
SMG1-215ENST00000568239 IL1RNP18510 177 aa6.7□□□□□ -1.34
SMG1-215ENST00000568239 ARF3P61204 181 aaPredicted RBP6.7□□□□□ -1.34
SMG1-215ENST00000568239 SNRPNP63162 240 aaKnown RBP6.7□□□□□ -1.34
SMG1-215ENST00000568239 SPIDRQ14159 915 aa6.7□□□□□ -1.34
SMG1-215ENST00000568239 SUZ12Q15022 739 aaKnown RBP6.7□□□□□ -1.34
SMG1-215ENST00000568239 ADRM1Q16186 407 aa6.7□□□□□ -1.34
SMG1-215ENST00000568239 NKG7Q16617 165 aa6.7□□□□□ -1.34
SMG1-215ENST00000568239 C6orf52Q5T4I8 152 aa6.7□□□□□ -1.34
SMG1-215ENST00000568239 SWT1Q5T5J6 900 aaKnown RBP6.7□□□□□ -1.34
SMG1-215ENST00000568239 CPZQ66K79 652 aa6.7□□□□□ -1.34
SMG1-215ENST00000568239 TNFAIP8L2Q6P589 184 aaPredicted RBP6.7□□□□□ -1.34
SMG1-215ENST00000568239 PTOV1Q86YD1 416 aa6.7□□□□□ -1.34
SMG1-215ENST00000568239 CCDC116Q8IYX3 515 aa6.7□□□□□ -1.34
SMG1-215ENST00000568239 C11orf65Q8NCR3 313 aa6.7□□□□□ -1.34
SMG1-215ENST00000568239 BAHD1Q8TBE0 780 aaPredicted RBP6.7□□□□□ -1.34
SMG1-215ENST00000568239 GAL3ST3Q96A11 431 aa6.7□□□□□ -1.34
SMG1-215ENST00000568239 COL26A1Q96A83 441 aa6.7□□□□□ -1.34
SMG1-215ENST00000568239 CNBD2Q96M20 576 aa6.7□□□□□ -1.34
SMG1-215ENST00000568239 MAPKAP1Q9BPZ7 522 aa6.7□□□□□ -1.34
SMG1-215ENST00000568239 YY1AP1Q9H869 796 aa6.7□□□□□ -1.34
SMG1-215ENST00000568239 SLC35C2Q9NQQ7 365 aa6.7□□□□□ -1.34
SMG1-215ENST00000568239 GPATCH2Q9NW75 528 aa6.7□□□□□ -1.34
SMG1-215ENST00000568239 SAMD4AQ9UPU9 718 aaKnown RBP6.7□□□□□ -1.34
SMG1-215ENST00000568239 ENTPD4Q9Y227 616 aa6.7□□□□□ -1.34
SMG1-215ENST00000568239 U3KQV3 271 aa6.7□□□□□ -1.34
SMG1-215ENST00000568239 ARID1BQ8NFD5 2236 aaPredicted RBP6.7□□□□□ -1.34
SMG1-215ENST00000568239 RP1P56715 2156 aa6.7□□□□□ -1.34
SMG1-215ENST00000568239 TNFSF14O43557 240 aa6.69□□□□□ -1.34
SMG1-215ENST00000568239 DEAF1O75398 565 aaPredicted RBP6.69□□□□□ -1.34
SMG1-215ENST00000568239 KRT75O95678 551 aa6.69□□□□□ -1.34
SMG1-215ENST00000568239 OPN1SWP03999 348 aa6.69□□□□□ -1.34
SMG1-215ENST00000568239 RETP07949 1114 aa6.69□□□□□ -1.34
SMG1-215ENST00000568239 UQCRC2P22695 453 aa6.69□□□□□ -1.34
SMG1-215ENST00000568239 NTSP30990 170 aa6.69□□□□□ -1.34
SMG1-215ENST00000568239 KDELR2P33947 212 aa6.69□□□□□ -1.34
SMG1-215ENST00000568239 CDK9P50750 372 aaKnown RBP6.69□□□□□ -1.34
SMG1-215ENST00000568239 TRA2BP62995 288 aaKnown RBP6.69□□□□□ -1.34
SMG1-215ENST00000568239 KLHL35Q6PF15 583 aa6.69□□□□□ -1.34
SMG1-215ENST00000568239 CEACAM20Q6UY09 585 aa6.69□□□□□ -1.34
SMG1-215ENST00000568239 VTCN1Q7Z7D3 282 aa6.69□□□□□ -1.34
SMG1-215ENST00000568239 RBM12BQ8IXT5 1001 aaKnown RBP6.69□□□□□ -1.34
SMG1-215ENST00000568239 OR52N2Q8NGI0 321 aa6.69□□□□□ -1.34
SMG1-215ENST00000568239 GOT1L1Q8NHS2 421 aaPredicted RBP6.69□□□□□ -1.34
SMG1-215ENST00000568239 MAGEE2Q8TD90 523 aaPredicted RBP6.69□□□□□ -1.34
SMG1-215ENST00000568239 UTP15Q8TED0 518 aaKnown RBP6.69□□□□□ -1.34
SMG1-215ENST00000568239 OR5P2Q8WZ92 322 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms