RNA–Protein interactions for RNA: ENST00000567635.5

SF3B3-209, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 5

Gene SF3B3, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-209ENST00000567635 KCNK10P57789 538 aa6.46□□□□□ -1.38
SF3B3-209ENST00000567635 STX4Q12846 297 aa6.46□□□□□ -1.38
SF3B3-209ENST00000567635 SLAMF1Q13291 335 aa6.46□□□□□ -1.38
SF3B3-209ENST00000567635 NAA30Q147X3 362 aaPredicted RBP6.46□□□□□ -1.38
SF3B3-209ENST00000567635 PCBP2Q15366 365 aaKnown RBP eCLIP6.46□□□□□ -1.38
SF3B3-209ENST00000567635 MAPKAPK3Q16644 382 aa6.46□□□□□ -1.38
SF3B3-209ENST00000567635 UBAP2Q5T6F2 1119 aaKnown RBP6.46□□□□□ -1.38
SF3B3-209ENST00000567635 DEPDC1Q5TB30 811 aa6.46□□□□□ -1.38
SF3B3-209ENST00000567635 KHDRBS2Q5VWX1 349 aaKnown RBP6.46□□□□□ -1.38
SF3B3-209ENST00000567635 LIPJQ5W064 366 aa6.46□□□□□ -1.38
SF3B3-209ENST00000567635 OR4C11Q6IEV9 310 aa6.46□□□□□ -1.38
SF3B3-209ENST00000567635 GRHL2Q6ISB3 625 aa6.46□□□□□ -1.38
SF3B3-209ENST00000567635 SLC25A25Q6KCM7 469 aa6.46□□□□□ -1.38
SF3B3-209ENST00000567635 GFRALQ6UXV0 394 aa6.46□□□□□ -1.38
SF3B3-209ENST00000567635 TAOK1Q7L7X3 1001 aa6.46□□□□□ -1.38
SF3B3-209ENST00000567635 IFT20Q8IY31 132 aa6.46□□□□□ -1.38
SF3B3-209ENST00000567635 ARMC10Q8N2F6 343 aa6.46□□□□□ -1.38
SF3B3-209ENST00000567635 TMEM132CQ8N3T6 1108 aa6.46□□□□□ -1.38
SF3B3-209ENST00000567635 FAM47BQ8NA70 645 aa6.46□□□□□ -1.38
SF3B3-209ENST00000567635 TMEM178AQ8NBL3 297 aa6.46□□□□□ -1.38
SF3B3-209ENST00000567635 TMEM52Q8NDY8 209 aa6.46□□□□□ -1.38
SF3B3-209ENST00000567635 C7orf57Q8NEG2 295 aa6.46□□□□□ -1.38
SF3B3-209ENST00000567635 B3GNT7Q8NFL0 401 aa6.46□□□□□ -1.38
SF3B3-209ENST00000567635 HUS1BQ8NHY5 278 aa6.46□□□□□ -1.38
SF3B3-209ENST00000567635 PHF3Q92576 2039 aaKnown RBP6.46□□□□□ -1.38
SF3B3-209ENST00000567635 REPS1Q96D71 796 aa6.46□□□□□ -1.38
SF3B3-209ENST00000567635 SCYL1Q96KG9 808 aa6.46□□□□□ -1.38
SF3B3-209ENST00000567635 SIGLEC12Q96PQ1 595 aa6.46□□□□□ -1.38
SF3B3-209ENST00000567635 HS3ST6Q96QI5 342 aa6.46□□□□□ -1.38
SF3B3-209ENST00000567635 CCDC77Q9BR77 488 aa6.46□□□□□ -1.38
SF3B3-209ENST00000567635 CENPKQ9BS16 269 aa6.46□□□□□ -1.38
SF3B3-209ENST00000567635 MS4A8Q9BY19 250 aa6.46□□□□□ -1.38
SF3B3-209ENST00000567635 ALOXE3Q9BYJ1 711 aa6.46□□□□□ -1.38
SF3B3-209ENST00000567635 CDC42EP4Q9H3Q1 356 aaKnown RBP6.46□□□□□ -1.38
SF3B3-209ENST00000567635 TRIM45Q9H8W5 580 aaPredicted RBP6.46□□□□□ -1.38
SF3B3-209ENST00000567635 IPPKQ9H8X2 491 aa6.46□□□□□ -1.38
SF3B3-209ENST00000567635 ACTR8Q9H981 624 aa6.46□□□□□ -1.38
SF3B3-209ENST00000567635 ADAP2Q9NPF8 381 aa6.46□□□□□ -1.38
SF3B3-209ENST00000567635 KLHL1Q9NR64 748 aa6.46□□□□□ -1.38
SF3B3-209ENST00000567635 PSD3Q9NYI0 1048 aa6.46□□□□□ -1.38
SF3B3-209ENST00000567635 LRFN1Q9P244 771 aa6.46□□□□□ -1.38
SF3B3-209ENST00000567635 CPSF2Q9P2I0 782 aaKnown RBP6.46□□□□□ -1.38
SF3B3-209ENST00000567635 SEC14L3Q9UDX4 400 aa6.46□□□□□ -1.38
SF3B3-209ENST00000567635 VTI1BQ9UEU0 232 aa6.46□□□□□ -1.38
SF3B3-209ENST00000567635 TMCO1Q9UM00 188 aa6.46□□□□□ -1.38
SF3B3-209ENST00000567635 PPIEQ9UNP9 301 aaKnown RBP6.46□□□□□ -1.38
SF3B3-209ENST00000567635 TSC22D4Q9Y3Q8 395 aa6.46□□□□□ -1.38
SF3B3-209ENST00000567635 CLCA3PQ9Y6N3 262 aa6.46□□□□□ -1.38
SF3B3-209ENST00000567635 SPACA6W5XKT8 324 aa6.46□□□□□ -1.38
SF3B3-209ENST00000567635 NCOA6Q14686 2063 aaPredicted RBP6.46□□□□□ -1.38
SF3B3-209ENST00000567635 INTS1Q8N201 2190 aaKnown RBP6.45□□□□□ -1.38
SF3B3-209ENST00000567635 TRBV11-1A0A0K0K1C0 115 aa6.45□□□□□ -1.38
SF3B3-209ENST00000567635 MYOCOSA0A1B0GUC4 107 aa6.45□□□□□ -1.38
SF3B3-209ENST00000567635 A1L4Q6 167 aa6.45□□□□□ -1.38
SF3B3-209ENST00000567635 H0YIV9 168 aa6.45□□□□□ -1.38
SF3B3-209ENST00000567635 TGFBR3LH3BV60 316 aa6.45□□□□□ -1.38
SF3B3-209ENST00000567635 SAP18O00422 153 aaKnown RBP6.45□□□□□ -1.38
SF3B3-209ENST00000567635 RTCAO00442 366 aaKnown RBP6.45□□□□□ -1.38
SF3B3-209ENST00000567635 UGDHO60701 494 aa6.45□□□□□ -1.38
SF3B3-209ENST00000567635 SLC25A12O75746 678 aa6.45□□□□□ -1.38
SF3B3-209ENST00000567635 NEURL1O76050 574 aa6.45□□□□□ -1.38
SF3B3-209ENST00000567635 ZFAND5O76080 213 aa6.45□□□□□ -1.38
SF3B3-209ENST00000567635 UNC5CO95185 931 aa6.45□□□□□ -1.38
SF3B3-209ENST00000567635 CLDN9O95484 217 aa6.45□□□□□ -1.38
SF3B3-209ENST00000567635 MLYCDO95822 493 aa6.45□□□□□ -1.38
SF3B3-209ENST00000567635 SNRPAP09012 282 aaKnown RBP6.45□□□□□ -1.38
SF3B3-209ENST00000567635 TNNI3P19429 210 aa6.45□□□□□ -1.38
SF3B3-209ENST00000567635 HIST1H1TP22492 207 aaPredicted RBP6.45□□□□□ -1.38
SF3B3-209ENST00000567635 CPN2P22792 545 aa6.45□□□□□ -1.38
SF3B3-209ENST00000567635 ECHS1P30084 290 aa6.45□□□□□ -1.38
SF3B3-209ENST00000567635 PPP2R1BP30154 601 aa6.45□□□□□ -1.38
SF3B3-209ENST00000567635 TLX1P31314 330 aaPredicted RBP6.45□□□□□ -1.38
SF3B3-209ENST00000567635 TRHRP34981 398 aaPredicted RBP6.45□□□□□ -1.38
SF3B3-209ENST00000567635 SSR2P43308 183 aa6.45□□□□□ -1.38
SF3B3-209ENST00000567635 PIK3CGP48736 1102 aa6.45□□□□□ -1.38
SF3B3-209ENST00000567635 GPR143P51810 404 aa6.45□□□□□ -1.38
SF3B3-209ENST00000567635 RAP1GDS1P52306 607 aa6.45□□□□□ -1.38
SF3B3-209ENST00000567635 ARFIP1P53367 373 aa6.45□□□□□ -1.38
SF3B3-209ENST00000567635 PHEXP78562 749 aa6.45□□□□□ -1.38
SF3B3-209ENST00000567635 ALDH6A1Q02252 535 aaKnown RBP6.45□□□□□ -1.38
SF3B3-209ENST00000567635 BIKQ13323 160 aa6.45□□□□□ -1.38
SF3B3-209ENST00000567635 DDX39BQ13838 428 aaKnown RBP6.45□□□□□ -1.38
SF3B3-209ENST00000567635 GTF2H2Q13888 395 aa6.45□□□□□ -1.38
SF3B3-209ENST00000567635 SERTAD2Q14140 314 aa6.45□□□□□ -1.38
SF3B3-209ENST00000567635 ELAVL1Q15717 326 aaKnown RBP6.45□□□□□ -1.38
SF3B3-209ENST00000567635 CPSF6Q16630 551 aaKnown RBP eCLIP6.45□□□□□ -1.38
SF3B3-209ENST00000567635 TSNAXIP1Q2TAA8 658 aa6.45□□□□□ -1.38
SF3B3-209ENST00000567635 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.45□□□□□ -1.381e-8■□□□□ 10.9
SF3B3-209ENST00000567635 KRTCAP3Q53RY4 240 aa6.45□□□□□ -1.38
SF3B3-209ENST00000567635 TECRLQ5HYJ1 363 aa6.45□□□□□ -1.38
SF3B3-209ENST00000567635 LGSNQ5TDP6 509 aa6.45□□□□□ -1.38
SF3B3-209ENST00000567635 ZNF468Q5VIY5 522 aaPredicted RBP6.45□□□□□ -1.38
SF3B3-209ENST00000567635 GTF2H2CQ6P1K8 395 aa6.45□□□□□ -1.38
SF3B3-209ENST00000567635 ZNF793Q6ZN11 406 aa6.45□□□□□ -1.38
SF3B3-209ENST00000567635 TRMT10CQ7L0Y3 403 aaKnown RBP6.45□□□□□ -1.38
SF3B3-209ENST00000567635 MAMDC2Q7Z304 686 aaPredicted RBP6.45□□□□□ -1.38
SF3B3-209ENST00000567635 GOLGA7Q7Z5G4 137 aa6.45□□□□□ -1.38
SF3B3-209ENST00000567635 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.45□□□□□ -1.38
SF3B3-209ENST00000567635 CLNKQ7Z7G1 428 aa6.45□□□□□ -1.38
SF3B3-209ENST00000567635 GPR180Q86V85 440 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms